| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622988
Identifier: 116622988
GI number: 116622988
Start: 4921224
End: 4923053
Strand: Reverse
Name: 116622988
Synonym: Acid_3891
Alternate gene names: NA
Gene position: 4923053-4921224 (Counterclockwise)
Preceding gene: 116622989
Following gene: 116622987
Centisome position: 49.4
GC content: 65.96
Gene sequence:
>1830_bases ATGAGGCGTCTTCTTTCCCTCCTTCTCTTTTCTTTTGCGCTGGGTGCGCAGCCAACTGCAATCGTAATTCGCGGAGCGCG CGTGGTGGATGGCACGGGTGCGCCGGCGCGGGAAGCGACGGTGGTAATCCGGGGTTCGCGGATCGAAGCGGTGGCGACGA ACGCCGATGTCCCGGCGGGGGCCCGTGTGATCGATGCCACGGGGCAGACGCTGCTGCCGGGGCTGTTCGACTTGCACACG CATCTTTCGGCATCGGCGGCGAACGGCGTACCGGGCGATTGGGGCAAGAATCTGAAGGCTTACCTGGCGAGTGGTGTCAC CACGGTGAACGACTATGCCACGTACGGCGAGATGTTCGCGCCCATGCGGCAATTGCTGAAATCGGGCGCGACGCCGGGAC CGCACGTGAATATGGCGGTGCGGATGAGCACTCCGGGTGGGCACGGGACGGAAGCCGGTTGGGGCGATTTCATGACTCTT ATCGCCGCGACTCCGGCGCAGGCGCACGCGCAAATGAAAATCGCGCTTGCGTACAAGCCGGACCTGATCAAAGTGTTCAC CGACGGCTGGCGCTACGGCAGCGCGCCGAATTTGAGCAGCATGAATCTGGAAACGCTGGCCGCGATCGTGGAGGATGCGC ACGCGGCGAACGTGAAAGTAGTGACCCACACGGTGACGCTGGAGGGCGCGAAGATCGCGGCGCGCGCGGGAGTGGACATC CTGGTGCACGGGATCGGCGATGCGGACGTGGACACGGAACTGATCGATCTCATGAAGGCGAAGCACACGGCCTATGTGTC GACACTGGCAGTGTACGAATACAAGGCGGGCGGTCCACCGGCGGCGAAGCTGGCGACGCTGCTGGATCCGGGGTCGCGCG CCACGCTGCGTCCGCAGGCCTCGACGGCCCCGATGCCGCCGGAAAGGGCGGCGCGCTGGAAGCATCTCACGGGCAACGTG GAGCGGCTGTTCGCGGCGGGGATCCCGGTGGGAGCGGGCACGGACGCGGGAATGCCGGGAACCTATCACGGATATGCGTC GCTGCGCGAGTTGGAACTGCTGGTGGAGAGCGGCCTCTCGCCGCTGGCCGCGATCGCGGCGGCGACCGGTGAGAGCGCGC GCGCGGTGGGCGTGGACGGCGATCGCGGCACGGTCGCGGCGGGCAAGGCGGCGGACCTGGTGCTGGTGGATGGCCGTCCG GATGAGCGAATCGCGGACATCGAGAAGACGCGGCGGGTGTTCTTGGGCGGAGTTGAAGTGGCGCTGCCGGACTTGGAGAA GGCGATCCAATCGCCGGAGATGACGGCACTGCCGGCGCACTCCGTGGACGCGCTGGTGGACGATATGGAGCGCACCGACG GGCGGACGCGATTGGGTACGCTGCGGGTTAACGGCACTGACGCAGGCGTGGATCACTCGCAGATGATTTTTCTGCCGGTG GTACGGAGCGGTCACGATCACGCGATGCTGGTGACGGCCGCAATGGCTGCGAAGGACGCGCCCTTCGTGCGGCTGGAGTT GCCGCTCACGCCGGGTGGGATCGAACTGGCCGATGTCAGCAGGTATGCGGGGGTGACGTTCGAGGTCCGCGGGGAGGGTG AGGGGCGGCTGGTGGTGGGGTCGTATCACCTGCGCAATGCGGATGCCTACGGAGCTCCGTTCGTGATGGGCGCGGAGTGG AAGACGGTCAAAATCCCCTTTGCGGAATTGCGGCGGAAAGCGGGGACTGGGGTGTGGGATGGGAAGGATGGGCGCTCGCT ATGCTTCGATTTGAGCGCGGCGGCCTCGGCTTCGGCATGGATGGAATTGGATAACGTGCGGTTCTATTGA
Upstream 100 bases:
>100_bases CCGCAGTACCCGGAGAAGTTTTCGGCGCTCGGCATACGGATCGGAATCAACTACGTTGTGTACTCGATGACGCACTGAGA GGACGTGTTAACATCCTTCG
Downstream 100 bases:
>100_bases GAGGGGTGGCGCGGCGTATCGGGAAGCCGCCTCAAAGGCGGCTGCAGCCAGGATTGGCTGCCCCACAAACAGATGCAGAG TAGTGCAGATGTACTACAAT
Product: amidohydrolase
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Xaa-Pro Dipeptidase; Organophosphate Acid Anhydrase; Pro-Hyp Dipeptidase; Imidazolonepropionase; Xaa-Pro Dipeptidase Family; Prolidase; Parathion Hydrolase; Amidohydrolase Domain Protein; Imidazolonepropionase Related Amidohydrolase; Organophopsphate Acid Anhydrase; Metal-Dependent Hydrolase; Metal-Dependent Amidohydrolase; Dipeptidase; M38 Family Protein; Aryldialkylphosphatase Related Protein; Amidohydrolase Family; Aryldialkylphosphatase; Secreted Hydrolase; LB Protein; Secreted Amidohydrolase; Exported Adenine Deaminase-Like Amidohydrolase; M38 Family Peptidase; Amidohydrolase Imidazolonepropionase; ABC-2 Type Transporter; Xaa-Arg/Lys Peptidase; Hydrolase; Amidohydrolase Domain-Containing Protein; X-Pro Dipeptidase; Imidazolonepropionase And Related Amidohydrolase
Number of amino acids: Translated: 609; Mature: 609
Protein sequence:
>609_residues MRRLLSLLLFSFALGAQPTAIVIRGARVVDGTGAPAREATVVIRGSRIEAVATNADVPAGARVIDATGQTLLPGLFDLHT HLSASAANGVPGDWGKNLKAYLASGVTTVNDYATYGEMFAPMRQLLKSGATPGPHVNMAVRMSTPGGHGTEAGWGDFMTL IAATPAQAHAQMKIALAYKPDLIKVFTDGWRYGSAPNLSSMNLETLAAIVEDAHAANVKVVTHTVTLEGAKIAARAGVDI LVHGIGDADVDTELIDLMKAKHTAYVSTLAVYEYKAGGPPAAKLATLLDPGSRATLRPQASTAPMPPERAARWKHLTGNV ERLFAAGIPVGAGTDAGMPGTYHGYASLRELELLVESGLSPLAAIAAATGESARAVGVDGDRGTVAAGKAADLVLVDGRP DERIADIEKTRRVFLGGVEVALPDLEKAIQSPEMTALPAHSVDALVDDMERTDGRTRLGTLRVNGTDAGVDHSQMIFLPV VRSGHDHAMLVTAAMAAKDAPFVRLELPLTPGGIELADVSRYAGVTFEVRGEGEGRLVVGSYHLRNADAYGAPFVMGAEW KTVKIPFAELRRKAGTGVWDGKDGRSLCFDLSAAASASAWMELDNVRFY
Sequences:
>Translated_609_residues MRRLLSLLLFSFALGAQPTAIVIRGARVVDGTGAPAREATVVIRGSRIEAVATNADVPAGARVIDATGQTLLPGLFDLHT HLSASAANGVPGDWGKNLKAYLASGVTTVNDYATYGEMFAPMRQLLKSGATPGPHVNMAVRMSTPGGHGTEAGWGDFMTL IAATPAQAHAQMKIALAYKPDLIKVFTDGWRYGSAPNLSSMNLETLAAIVEDAHAANVKVVTHTVTLEGAKIAARAGVDI LVHGIGDADVDTELIDLMKAKHTAYVSTLAVYEYKAGGPPAAKLATLLDPGSRATLRPQASTAPMPPERAARWKHLTGNV ERLFAAGIPVGAGTDAGMPGTYHGYASLRELELLVESGLSPLAAIAAATGESARAVGVDGDRGTVAAGKAADLVLVDGRP DERIADIEKTRRVFLGGVEVALPDLEKAIQSPEMTALPAHSVDALVDDMERTDGRTRLGTLRVNGTDAGVDHSQMIFLPV VRSGHDHAMLVTAAMAAKDAPFVRLELPLTPGGIELADVSRYAGVTFEVRGEGEGRLVVGSYHLRNADAYGAPFVMGAEW KTVKIPFAELRRKAGTGVWDGKDGRSLCFDLSAAASASAWMELDNVRFY >Mature_609_residues MRRLLSLLLFSFALGAQPTAIVIRGARVVDGTGAPAREATVVIRGSRIEAVATNADVPAGARVIDATGQTLLPGLFDLHT HLSASAANGVPGDWGKNLKAYLASGVTTVNDYATYGEMFAPMRQLLKSGATPGPHVNMAVRMSTPGGHGTEAGWGDFMTL IAATPAQAHAQMKIALAYKPDLIKVFTDGWRYGSAPNLSSMNLETLAAIVEDAHAANVKVVTHTVTLEGAKIAARAGVDI LVHGIGDADVDTELIDLMKAKHTAYVSTLAVYEYKAGGPPAAKLATLLDPGSRATLRPQASTAPMPPERAARWKHLTGNV ERLFAAGIPVGAGTDAGMPGTYHGYASLRELELLVESGLSPLAAIAAATGESARAVGVDGDRGTVAAGKAADLVLVDGRP DERIADIEKTRRVFLGGVEVALPDLEKAIQSPEMTALPAHSVDALVDDMERTDGRTRLGTLRVNGTDAGVDHSQMIFLPV VRSGHDHAMLVTAAMAAKDAPFVRLELPLTPGGIELADVSRYAGVTFEVRGEGEGRLVVGSYHLRNADAYGAPFVMGAEW KTVKIPFAELRRKAGTGVWDGKDGRSLCFDLSAAASASAWMELDNVRFY
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63959; Mature: 63959
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLSLLLFSFALGAQPTAIVIRGARVVDGTGAPAREATVVIRGSRIEAVATNADVPAG CHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCEEEEEECCEEEEEEECCCCCCC ARVIDATGQTLLPGLFDLHTHLSASAANGVPGDWGKNLKAYLASGVTTVNDYATYGEMFA CEEEECCCCHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHH PMRQLLKSGATPGPHVNMAVRMSTPGGHGTEAGWGDFMTLIAATPAQAHAQMKIALAYKP HHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHCCEEEEEEEECC DLIKVFTDGWRYGSAPNLSSMNLETLAAIVEDAHAANVKVVTHTVTLEGAKIAARAGVDI CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEECCCCEE LVHGIGDADVDTELIDLMKAKHTAYVSTLAVYEYKAGGPPAAKLATLLDPGSRATLRPQA EEEECCCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHCCCCCCCEECCCC STAPMPPERAARWKHLTGNVERLFAAGIPVGAGTDAGMPGTYHGYASLRELELLVESGLS CCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC PLAAIAAATGESARAVGVDGDRGTVAAGKAADLVLVDGRPDERIADIEKTRRVFLGGVEV HHHHHHHCCCCCCEEEECCCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHEECCCEE ALPDLEKAIQSPEMTALPAHSVDALVDDMERTDGRTRLGTLRVNGTDAGVDHSQMIFLPV ECHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEE VRSGHDHAMLVTAAMAAKDAPFVRLELPLTPGGIELADVSRYAGVTFEVRGEGEGRLVVG ECCCCCCEEEEEEHHHHCCCCEEEEEECCCCCCEEEEEHHHHCCEEEEEECCCCCEEEEE SYHLRNADAYGAPFVMGAEWKTVKIPFAELRRKAGTGVWDGKDGRSLCFDLSAAASASAW EEEECCCCCCCCCEEECCCCEEEECCHHHHHHHHCCCCCCCCCCCEEEEECHHHCCCHHH MELDNVRFY EEECCEECC >Mature Secondary Structure MRRLLSLLLFSFALGAQPTAIVIRGARVVDGTGAPAREATVVIRGSRIEAVATNADVPAG CHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCEEEEEECCEEEEEEECCCCCCC ARVIDATGQTLLPGLFDLHTHLSASAANGVPGDWGKNLKAYLASGVTTVNDYATYGEMFA CEEEECCCCHHHCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHH PMRQLLKSGATPGPHVNMAVRMSTPGGHGTEAGWGDFMTLIAATPAQAHAQMKIALAYKP HHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHCCEEEEEEEECC DLIKVFTDGWRYGSAPNLSSMNLETLAAIVEDAHAANVKVVTHTVTLEGAKIAARAGVDI CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEECCCCEE LVHGIGDADVDTELIDLMKAKHTAYVSTLAVYEYKAGGPPAAKLATLLDPGSRATLRPQA EEEECCCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHCCCCCCCEECCCC STAPMPPERAARWKHLTGNVERLFAAGIPVGAGTDAGMPGTYHGYASLRELELLVESGLS CCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC PLAAIAAATGESARAVGVDGDRGTVAAGKAADLVLVDGRPDERIADIEKTRRVFLGGVEV HHHHHHHCCCCCCEEEECCCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHEECCCEE ALPDLEKAIQSPEMTALPAHSVDALVDDMERTDGRTRLGTLRVNGTDAGVDHSQMIFLPV ECHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEE VRSGHDHAMLVTAAMAAKDAPFVRLELPLTPGGIELADVSRYAGVTFEVRGEGEGRLVVG ECCCCCCEEEEEEHHHHCCCCEEEEEECCCCCCEEEEEHHHHCCEEEEEECCCCCEEEEE SYHLRNADAYGAPFVMGAEWKTVKIPFAELRRKAGTGVWDGKDGRSLCFDLSAAASASAW EEEECCCCCCCCCEEECCCCEEEECCHHHHHHHHCCCCCCCCCCCEEEEECHHHCCCHHH MELDNVRFY EEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA