| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is nuoI1
Identifier: 116622976
GI number: 116622976
Start: 4913395
End: 4913898
Strand: Reverse
Name: nuoI1
Synonym: Acid_3879
Alternate gene names: 116622976
Gene position: 4913898-4913395 (Counterclockwise)
Preceding gene: 116622977
Following gene: 116622975
Centisome position: 49.31
GC content: 59.52
Gene sequence:
>504_bases ATGGCAAATCCAATCGAAGAAATCCTCGGAACGGCGGCAGCAATCGCTAAGGGTATGGGCATCACTTTCAAGGAGATGAT GGGCCCGACCGTTACGGACGATTATCCCGATGCACCTCCGAAGTTCGAAGAGCGGTTCCGCGGCGTTCACGTATTGCAGC GCGACGTCAACGGAATGGAGAAATGTGTGGCCTGCTTCCTCTGCGCGGCGGCCTGCCCCTCCAACTGCATTTACATCGAA GCGGCGGAGAATACCGACAAAATCCGCATGTCCGGCGGCGAGCGGTACGCCAAGGTCTATAACATCGATTACAACCGCTG CATCTTCTGCGGCTACTGCGTGGAGGCCTGCCCGACTGACGCCATCACGCACGGCCACGGATTCGAAGCCGCGAGTTACA ACACCTCCACGCTGGTCAAACGCAAAGAGGATATGCTCGTCCCCGTGCCGCCGGGCGCCAAACCGCCGTCCATGGCGGAT GAAGTGCCCGCTGGGGCACACTAG
Upstream 100 bases:
>100_bases ACGCGCAGGATAACGTACCCGCATGGAAGGCCGGTTGAGGGTCGCGGAACTAGGTTCCCGGCGGGAACCGCGAAAGGCAC GCTAGAATAAAGTAGACCGA
Downstream 100 bases:
>100_bases GGTCAAGTGTTCCGCGCCATCAGGGAGCAGATCGACACGATCTTCCGGGAAGATCCGGCCGCGAAGAGTGTGCTCGAGAT CGTCCTGTGTTACCCGGGAT
Product: NADH-quinone oxidoreductase subunit I
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I 1; NDH-1 subunit I 1
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MANPIEEILGTAAAIAKGMGITFKEMMGPTVTDDYPDAPPKFEERFRGVHVLQRDVNGMEKCVACFLCAAACPSNCIYIE AAENTDKIRMSGGERYAKVYNIDYNRCIFCGYCVEACPTDAITHGHGFEAASYNTSTLVKRKEDMLVPVPPGAKPPSMAD EVPAGAH
Sequences:
>Translated_167_residues MANPIEEILGTAAAIAKGMGITFKEMMGPTVTDDYPDAPPKFEERFRGVHVLQRDVNGMEKCVACFLCAAACPSNCIYIE AAENTDKIRMSGGERYAKVYNIDYNRCIFCGYCVEACPTDAITHGHGFEAASYNTSTLVKRKEDMLVPVPPGAKPPSMAD EVPAGAH >Mature_166_residues ANPIEEILGTAAAIAKGMGITFKEMMGPTVTDDYPDAPPKFEERFRGVHVLQRDVNGMEKCVACFLCAAACPSNCIYIEA AENTDKIRMSGGERYAKVYNIDYNRCIFCGYCVEACPTDAITHGHGFEAASYNTSTLVKRKEDMLVPVPPGAKPPSMADE VPAGAH
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains
Homologues:
Organism=Homo sapiens, GI4505371, Length=132, Percent_Identity=39.3939393939394, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1788617, Length=119, Percent_Identity=46.218487394958, Blast_Score=107, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17555194, Length=133, Percent_Identity=38.3458646616541, Blast_Score=99, Evalue=8e-22, Organism=Drosophila melanogaster, GI17864306, Length=132, Percent_Identity=39.3939393939394, Blast_Score=103, Evalue=7e-23,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NUOI1_SOLUE (Q01ZR8)
Other databases:
- EMBL: CP000473 - RefSeq: YP_825132.1 - ProteinModelPortal: Q01ZR8 - SMR: Q01ZR8 - STRING: Q01ZR8 - GeneID: 4427860 - GenomeReviews: CP000473_GR - KEGG: sus:Acid_3879 - NMPDR: fig|234267.9.peg.3687 - eggNOG: COG1143 - HOGENOM: HBG724359 - OMA: VEGGDNT - PhylomeDB: Q01ZR8 - ProtClustDB: CLSK774642 - HAMAP: MF_01351 - InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR010226 - Gene3D: G3DSA:1.10.1060.10 - TIGRFAMs: TIGR01971
Pfam domain/function: PF00037 Fer4
EC number: =1.6.99.5
Molecular weight: Translated: 18088; Mature: 17957
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANPIEEILGTAAAIAKGMGITFKEMMGPTVTDDYPDAPPKFEERFRGVHVLQRDVNGME CCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KCVACFLCAAACPSNCIYIEAAENTDKIRMSGGERYAKVYNIDYNRCIFCGYCVEACPTD HHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCEEEEEEECCCCCEEEEEHHHHHCCCC AITHGHGFEAASYNTSTLVKRKEDMLVPVPPGAKPPSMADEVPAGAH CCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCHHCCCCCCC >Mature Secondary Structure ANPIEEILGTAAAIAKGMGITFKEMMGPTVTDDYPDAPPKFEERFRGVHVLQRDVNGME CCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KCVACFLCAAACPSNCIYIEAAENTDKIRMSGGERYAKVYNIDYNRCIFCGYCVEACPTD HHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCEEEEEEECCCCCEEEEEHHHHHCCCC AITHGHGFEAASYNTSTLVKRKEDMLVPVPPGAKPPSMADEVPAGAH CCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA