| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is yhdN [H]
Identifier: 116622960
GI number: 116622960
Start: 4896880
End: 4897911
Strand: Direct
Name: yhdN [H]
Synonym: Acid_3862
Alternate gene names: 116622960
Gene position: 4896880-4897911 (Clockwise)
Preceding gene: 116622958
Following gene: 116622962
Centisome position: 49.14
GC content: 60.56
Gene sequence:
>1032_bases ATGCCGGATTCGACAATCGGAAGGCGAACTGTTCTCGGAGGAATTGCCGGGCTGACGGCTTCCGGTTTCGCTCAAACCAA CGCTCCTTCCGGCATGCCCTTGCGGCCGCTCGGCAGCACGGGCGAAAAGGTCTCGTGCATCGGCCTTGGCGGCTCCCACA TCGGCGCGCCGAAGGTGAGCGATGACGAGGCGATCCGGATTATGCGCTCGGCGATCGATCGCGGGCTCACGTTCATGGAC AATTCGTGGGACTACAACGGCGGCGTCAGCGAAGAGCGGATGGGGAAGGCGTTGCGCGACGGCTACCGGCAGAAGGTTTT CCTGATGACCAAGATCGACGGGCGCACGAGACAGGAGGCCGCGAAGCAGATCGAGGAATCGCTGCGAAGGCTGCAGACCG ATCACCTGGACCTGGTTCAGCATCACGAGATCATCCGCTTCGACGATCCTGACCGGATTTTCGCGGCCGGCGGCGCGCAG GAGGCGGTGTTGGCCGCGAAGCAGGCTGGGAAGGTGCGGTTCATCGGGTTCACGGGCCACAAAGATCCCCACATACACCT TTATATGCTGAGCGTCTGCGCGGCGCACGGCTTCCATCCGGATACGGTGCAGATGCCGCTCAATGTGATGGACGCGCATT TCCGCAGCTTCGAAAAGCTGGTACTGCCGGAACTGGTGAAGCAGAAGATCGGCGTACTCGGGATGAAGAGCATGGGGAGC AGCGTAATTTTGAAGAGCAAGGTGGTCACGCCGTTGGAATGCCTGCACTACGCGCTCAACCTGCCGACCTCGGTGGTAAT TACGGGAATCGACAGCCCGCAGATTCTGGATCAGGCGTTCGAAGCAGCGCACACCTTCCAACCGATGTCGAAGCAGCAGA TTGCCGGGCTGCTGAGCAAGACTAAGCCGGCGGCGGAACAGGGTCAGTACGAATTGTTCAAGACCAGCTCGCACTTCGAT TCCACGGCCAAGCATCCGGAATGGCTCGGCGAGGAATCGGCGCGCGTCAAGGAGTTAACGCAAGGGCAATAA
Upstream 100 bases:
>100_bases GGTGCGCACGCAGGCGCACCGCGGTGCGTGACACTGGCTACGAAGCGCATCTATCATTAGCGAGGCGCGGGTCCTAGAAT GGCGGTAGGTGCGCAAGGAG
Downstream 100 bases:
>100_bases CATTAATCCGGAGGAAGTTCGGAAGGCACTTTTCCGTGCACCGCGATATCGGTGACCATTCGCAAGGCGCGCGTATATGC TTGCAGCGCGAGGCGCTCGC
Product: aldo/keto reductase
Products: NA
Alternate protein names: GSP69; AKR11B [H]
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MPDSTIGRRTVLGGIAGLTASGFAQTNAPSGMPLRPLGSTGEKVSCIGLGGSHIGAPKVSDDEAIRIMRSAIDRGLTFMD NSWDYNGGVSEERMGKALRDGYRQKVFLMTKIDGRTRQEAAKQIEESLRRLQTDHLDLVQHHEIIRFDDPDRIFAAGGAQ EAVLAAKQAGKVRFIGFTGHKDPHIHLYMLSVCAAHGFHPDTVQMPLNVMDAHFRSFEKLVLPELVKQKIGVLGMKSMGS SVILKSKVVTPLECLHYALNLPTSVVITGIDSPQILDQAFEAAHTFQPMSKQQIAGLLSKTKPAAEQGQYELFKTSSHFD STAKHPEWLGEESARVKELTQGQ
Sequences:
>Translated_343_residues MPDSTIGRRTVLGGIAGLTASGFAQTNAPSGMPLRPLGSTGEKVSCIGLGGSHIGAPKVSDDEAIRIMRSAIDRGLTFMD NSWDYNGGVSEERMGKALRDGYRQKVFLMTKIDGRTRQEAAKQIEESLRRLQTDHLDLVQHHEIIRFDDPDRIFAAGGAQ EAVLAAKQAGKVRFIGFTGHKDPHIHLYMLSVCAAHGFHPDTVQMPLNVMDAHFRSFEKLVLPELVKQKIGVLGMKSMGS SVILKSKVVTPLECLHYALNLPTSVVITGIDSPQILDQAFEAAHTFQPMSKQQIAGLLSKTKPAAEQGQYELFKTSSHFD STAKHPEWLGEESARVKELTQGQ >Mature_342_residues PDSTIGRRTVLGGIAGLTASGFAQTNAPSGMPLRPLGSTGEKVSCIGLGGSHIGAPKVSDDEAIRIMRSAIDRGLTFMDN SWDYNGGVSEERMGKALRDGYRQKVFLMTKIDGRTRQEAAKQIEESLRRLQTDHLDLVQHHEIIRFDDPDRIFAAGGAQE AVLAAKQAGKVRFIGFTGHKDPHIHLYMLSVCAAHGFHPDTVQMPLNVMDAHFRSFEKLVLPELVKQKIGVLGMKSMGSS VILKSKVVTPLECLHYALNLPTSVVITGIDSPQILDQAFEAAHTFQPMSKQQIAGLLSKTKPAAEQGQYELFKTSSHFDS TAKHPEWLGEESARVKELTQGQ
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Escherichia coli, GI87081735, Length=161, Percent_Identity=34.1614906832298, Blast_Score=72, Evalue=6e-14, Organism=Drosophila melanogaster, GI24646159, Length=213, Percent_Identity=30.5164319248826, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24646155, Length=173, Percent_Identity=28.9017341040462, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37511; Mature: 37380
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDSTIGRRTVLGGIAGLTASGFAQTNAPSGMPLRPLGSTGEKVSCIGLGGSHIGAPKVS CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC DDEAIRIMRSAIDRGLTFMDNSWDYNGGVSEERMGKALRDGYRQKVFLMTKIDGRTRQEA CHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHCHHCEEEEEEECCCCHHHHH AKQIEESLRRLQTDHLDLVQHHEIIRFDDPDRIFAAGGAQEAVLAAKQAGKVRFIGFTGH HHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCCCHHHHHHHHHCCCEEEEEECCC KDPHIHLYMLSVCAAHGFHPDTVQMPLNVMDAHFRSFEKLVLPELVKQKIGVLGMKSMGS CCCCEEEHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SVILKSKVVTPLECLHYALNLPTSVVITGIDSPQILDQAFEAAHTFQPMSKQQIAGLLSK CEEEHHHCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH TKPAAEQGQYELFKTSSHFDSTAKHPEWLGEESARVKELTQGQ CCCCHHCCCEEEEECCCCCCCCCCCCHHCCCHHHHHHHHHCCC >Mature Secondary Structure PDSTIGRRTVLGGIAGLTASGFAQTNAPSGMPLRPLGSTGEKVSCIGLGGSHIGAPKVS CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC DDEAIRIMRSAIDRGLTFMDNSWDYNGGVSEERMGKALRDGYRQKVFLMTKIDGRTRQEA CHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHCHHCEEEEEEECCCCHHHHH AKQIEESLRRLQTDHLDLVQHHEIIRFDDPDRIFAAGGAQEAVLAAKQAGKVRFIGFTGH HHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEECCCCHHHHHHHHHCCCEEEEEECCC KDPHIHLYMLSVCAAHGFHPDTVQMPLNVMDAHFRSFEKLVLPELVKQKIGVLGMKSMGS CCCCEEEHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SVILKSKVVTPLECLHYALNLPTSVVITGIDSPQILDQAFEAAHTFQPMSKQQIAGLLSK CEEEHHHCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH TKPAAEQGQYELFKTSSHFDSTAKHPEWLGEESARVKELTQGQ CCCCHHCCCEEEEECCCCCCCCCCCCHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 9298659 [H]