| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is hisD2 [H]
Identifier: 116622953
GI number: 116622953
Start: 4889161
End: 4890432
Strand: Reverse
Name: hisD2 [H]
Synonym: Acid_3855
Alternate gene names: 116622953
Gene position: 4890432-4889161 (Counterclockwise)
Preceding gene: 116622954
Following gene: 116622952
Centisome position: 49.07
GC content: 67.45
Gene sequence:
>1272_bases GTGATCCGCATACTGGAAAGCAAAGACGTCGGCCACCTGCTGAAACGCAAGGCCGCCCGCTTCACCGAAGCCGAGGCGGT GGTGACGCCGATTCTAGAGGCCGTCCGCAAACGCGGCGATCGCGCCCTGATGGATTACGCGCGCCAGTTCGATCAACTCC AACGCAAATCCGTCCGCGTGCCGGAAGGCGAGTTACTCGCCGCGCGCGACGGCCTCACGCCGGAATTTCGCGGCGCCATC GAGACCGCGGCGCCGAACATCCGCGCCTATGCCGGACGTCAGATGCCGCGCGAATGGAACCGCTCCTTCGGCGCCGGCCT GCAACTCGGGCAGCTCGTACGCCCCCTCGATGCCGTCGCCGCCTACATCCCCGCCGGGCGCTATCCGCTGCCCAGCACCG TGATGATGACCGTGATTCCCGCGCAGGTCGCAGGCGTCCCCAACATCTGCATCGCCTGTCCCAAGCCGGTCGCCGAAGTC TATGGCACGGCCGCCATGCTCGGCGTCCGCAACGTCTTCCAGATGGGCGGCGCGCAGGCCATCGCCGCCTTCGCCTTCGG CACCCGCACCGTCCCGCGCGCCGACCGCATCGTCGGTCCTGGCAACATCTACGTGGCTGCCGCTAAGAAACTCCTCGCCG GGGAAGTCGGCATCGATTTCATCGCCGGCCCCACCGAAATCCTGATCATCGCCGCCGATGGCGACCCGCGCCACTTCGCC GCCGACATGCTCGCCCAAGCCGAACACGATGTCGATGCCTCCGCCATCCTGCTCACCACCTCCAAACGGTTGGCCGCCGC CGTATCGCGCGAACTGGAACGTCAACTCGCCATCCTCCCCACCGCCCCCGTTGCCTCCAAATCCATCGCGAAAAACTCCG CCATCATCCTCGTCCGCAGTCTCGACGAGGCCCTCGAAATCTCCAACCGCTTCGCCCCCGAGCACCTAAGCATCCCCGAT GCGTCGCTGCTCCCCGGAGTCCGCCACGCCGGCAGCGTCTTCGTCGGCCCCTACAGCCCCGAAGCCGCCGGCGATTACGC AAGCGGTCCCAACCACGTCCTCCCGACCAGCGGCGCCGCCCGCCAGCGCGGCGGCCTCAGTGTCACCGACTACGTGAAAG TGATCTCCGTGCAAAACCTGACCGAACCCGCCCTGCGCAGGCTCGCCCCATCCATCACCACCCTCGCCCGCGCCGAAGGC CTCGAAGCCCACGCCCGCAGCGTCGAAGTGAGGCTCACGCGAACCGCGACCGTAAGGGAGCGATCTCTATGA
Upstream 100 bases:
>100_bases ACACCATCCTCGATGAAAGCACCGTGCGCGACATAATTCCCCGGCTGAAGCAGGCGGGAGGCGAGGGAATCGTGGAATAC CCGCTCAACAAGATTGTCCT
Downstream 100 bases:
>100_bases CAAAACTCCCCAAAGGCGCCATCAAACCCCGCCCCGCCGTCATCGGCATGGCTCCCTACTCGCCGCCCACCGGAGGCCGC TCCGATAAGCTCCGCCTGGA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH 2 [H]
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MIRILESKDVGHLLKRKAARFTEAEAVVTPILEAVRKRGDRALMDYARQFDQLQRKSVRVPEGELLAARDGLTPEFRGAI ETAAPNIRAYAGRQMPREWNRSFGAGLQLGQLVRPLDAVAAYIPAGRYPLPSTVMMTVIPAQVAGVPNICIACPKPVAEV YGTAAMLGVRNVFQMGGAQAIAAFAFGTRTVPRADRIVGPGNIYVAAAKKLLAGEVGIDFIAGPTEILIIAADGDPRHFA ADMLAQAEHDVDASAILLTTSKRLAAAVSRELERQLAILPTAPVASKSIAKNSAIILVRSLDEALEISNRFAPEHLSIPD ASLLPGVRHAGSVFVGPYSPEAAGDYASGPNHVLPTSGAARQRGGLSVTDYVKVISVQNLTEPALRRLAPSITTLARAEG LEAHARSVEVRLTRTATVRERSL
Sequences:
>Translated_423_residues MIRILESKDVGHLLKRKAARFTEAEAVVTPILEAVRKRGDRALMDYARQFDQLQRKSVRVPEGELLAARDGLTPEFRGAI ETAAPNIRAYAGRQMPREWNRSFGAGLQLGQLVRPLDAVAAYIPAGRYPLPSTVMMTVIPAQVAGVPNICIACPKPVAEV YGTAAMLGVRNVFQMGGAQAIAAFAFGTRTVPRADRIVGPGNIYVAAAKKLLAGEVGIDFIAGPTEILIIAADGDPRHFA ADMLAQAEHDVDASAILLTTSKRLAAAVSRELERQLAILPTAPVASKSIAKNSAIILVRSLDEALEISNRFAPEHLSIPD ASLLPGVRHAGSVFVGPYSPEAAGDYASGPNHVLPTSGAARQRGGLSVTDYVKVISVQNLTEPALRRLAPSITTLARAEG LEAHARSVEVRLTRTATVRERSL >Mature_423_residues MIRILESKDVGHLLKRKAARFTEAEAVVTPILEAVRKRGDRALMDYARQFDQLQRKSVRVPEGELLAARDGLTPEFRGAI ETAAPNIRAYAGRQMPREWNRSFGAGLQLGQLVRPLDAVAAYIPAGRYPLPSTVMMTVIPAQVAGVPNICIACPKPVAEV YGTAAMLGVRNVFQMGGAQAIAAFAFGTRTVPRADRIVGPGNIYVAAAKKLLAGEVGIDFIAGPTEILIIAADGDPRHFA ADMLAQAEHDVDASAILLTTSKRLAAAVSRELERQLAILPTAPVASKSIAKNSAIILVRSLDEALEISNRFAPEHLSIPD ASLLPGVRHAGSVFVGPYSPEAAGDYASGPNHVLPTSGAARQRGGLSVTDYVKVISVQNLTEPALRRLAPSITTLARAEG LEAHARSVEVRLTRTATVRERSL
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=411, Percent_Identity=40.8759124087591, Blast_Score=288, Evalue=6e-79, Organism=Saccharomyces cerevisiae, GI6319819, Length=424, Percent_Identity=37.2641509433962, Blast_Score=272, Evalue=9e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 45115; Mature: 45115
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRILESKDVGHLLKRKAARFTEAEAVVTPILEAVRKRGDRALMDYARQFDQLQRKSVRV CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC PEGELLAARDGLTPEFRGAIETAAPNIRAYAGRQMPREWNRSFGAGLQLGQLVRPLDAVA CCCCEEEECCCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHH AYIPAGRYPLPSTVMMTVIPAQVAGVPNICIACPKPVAEVYGTAAMLGVRNVFQMGGAQA HHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHH IAAFAFGTRTVPRADRIVGPGNIYVAAAKKLLAGEVGIDFIAGPTEILIIAADGDPRHFA HHHHHHCCCCCCCHHCEECCCCEEHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCHHHH ADMLAQAEHDVDASAILLTTSKRLAAAVSRELERQLAILPTAPVASKSIAKNSAIILVRS HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHEECCCCCCCHHHHCCCCEEEEEEC LDEALEISNRFAPEHLSIPDASLLPGVRHAGSVFVGPYSPEAAGDYASGPNHVLPTSGAA HHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCH RQRGGLSVTDYVKVISVQNLTEPALRRLAPSITTLARAEGLEAHARSVEVRLTRTATVRE HHCCCCCHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHCCCHHHHCEEEEEEEEEHHHHH RSL CCC >Mature Secondary Structure MIRILESKDVGHLLKRKAARFTEAEAVVTPILEAVRKRGDRALMDYARQFDQLQRKSVRV CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC PEGELLAARDGLTPEFRGAIETAAPNIRAYAGRQMPREWNRSFGAGLQLGQLVRPLDAVA CCCCEEEECCCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHH AYIPAGRYPLPSTVMMTVIPAQVAGVPNICIACPKPVAEVYGTAAMLGVRNVFQMGGAQA HHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHH IAAFAFGTRTVPRADRIVGPGNIYVAAAKKLLAGEVGIDFIAGPTEILIIAADGDPRHFA HHHHHHCCCCCCCHHCEECCCCEEHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCHHHH ADMLAQAEHDVDASAILLTTSKRLAAAVSRELERQLAILPTAPVASKSIAKNSAIILVRS HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHEECCCCCCCHHHHCCCCEEEEEEC LDEALEISNRFAPEHLSIPDASLLPGVRHAGSVFVGPYSPEAAGDYASGPNHVLPTSGAA HHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCH RQRGGLSVTDYVKVISVQNLTEPALRRLAPSITTLARAEGLEAHARSVEVRLTRTATVRE HHCCCCCHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHCCCHHHHCEEEEEEEEEHHHHH RSL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA