| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB [H]
Identifier: 116622936
GI number: 116622936
Start: 4870157
End: 4872763
Strand: Reverse
Name: macB [H]
Synonym: Acid_3838
Alternate gene names: 116622936
Gene position: 4872763-4870157 (Counterclockwise)
Preceding gene: 116622937
Following gene: 116622931
Centisome position: 48.9
GC content: 68.32
Gene sequence:
>2607_bases ATGAACTGGGAAGATCGACTCGATAAGGAGCTGCGATTTCATCTGGAACAGCACACCGCCGATCTGATCGCGCAGGGGCA CACACCCGATGCGGCGCGGCGGATCGCGCGGATCGCGCTGGGTGGACCGGACCAGGTGAAGGAGGGATGCCGGGACGAGC GCCCCGCGCGCTGGCTGGCGGATTTCTGGCAGGACGTGCGATATGCGGTGCGCAGCCTGCGGCAGCGGCCCGGGTTCACG GCGGTTGCCCTGGGGACGCTGGCGCTCGGCATCGGCGCCACAACAGTGATGTTTACACTCATTAACGGCGTACTGCTGAA GCCGCTGCCGTACTCCGACCCGGGCCGGTTGATCCAGGTGGCGGGACACACAGCTCAGTACGGGAATCAGAATTTCGCGT ACCCGGACTACCTGGATCTGCGGCGCGAAATTCAGTCGTTAGGTCCGCTGGCGGGCTGGGTCTACAACTGGGGAACGCTG AGCCAGCCGGGCGATCCGGAGAATGTGGAAGTACGCGAGGTCACGGCGGATCTTTTCCCGGTGCTGGGTGCGAAGATGCT GCGCGGCCGCGGATTTCTGCCCGAGGAAGATGCTCCCGGGGGACGGCCGGTGGCGATTCTCGGCTACAGCCTGTGGCAGC GGAAGTTCGCGGGGAGCGCGGAGGCGATTGACGCGCCAGTGGTGCTGGACGGAACGCGGTATACGGTGGTGGGAATCGCC CGGCCGGAGATGCGGCTCGAGGGAGAGCCGGATGTTTTCACGCCACTCGGACAGGACCCGGCGGCTTACCTGCGCAACCG GCGGGCGCATCCGGTGGGTGTGCTGGGACGGTTGCGGCCGGGGGTAACACTGGCGCAGGCGCAATCCGAGGTAGCGGTGC TCGCCGGCAGGCTGTCTGCGCAATATCCGGAGAGCAATAAGGATCGCGCTTTTGTGGCGGACCGCCTGAGGGCCGACGTG GGCGACGTGCAATCCACGCTCTGGCTGTTGTTGGGCGCGGTGACGCTGGTGCTGTTGATTGCGTGCGTGAATGTGGCGAG CCTGCTGCTGGCGAAGGCGGTGGCGCGCGAGCGCGAGCTGGCGATGCGGATGGCGCTGGGCGCGGGCCGCTGGCGGCTGG TGCGGCAATGCCTCACGGAGAGCGCGGTGCTCGGGTTTGCGGGCGGCGTGGTCGGGGTGGTGCTGGCGGCGGTGGGGATC CGGCCGTTCGTCGCATTCTGGCCGGGGAGTTTGCCGCGCGCCGAGGAAGTGCAGTTGGATTGGCGGGTGCTGCTGTTCGC GGTGGCGGCGTCGCTGGTCAGCGGAATTCTGTTCGGGCTGGCGCCGGCACTGCGCGCGCCGGTTCGTCAACTGGAGCAGG CGCTGCGCAGTGGGGGACGCGCAGTGGCGGGCAGTCCACGGCGGCTGCACGGAGGGTTCGTGGCGGCCGAGATCGCGCTC GCGGTGGTGCTGCTGGTGGCGGCGGGGATGTTGGGACGCACGCTGATGAATCTCGCGGCGCTCGAGCCCGGAGTGAACCT GCACAACGTGCTGGTCGCGCGCATGCGTCTGGCGCCTTCGACCGTGTCCAGTCCGGCGGCGATGCGCGCGGCGTGGCAGT CCGCGCTGGATGAGGCGCGGCGCGTGCCGGGCGTGCAGGCGGCCGCGACGGTGGATACCGTGCCGATGCGGCAGGGCAAC AATCAACTGGGTTATTGGACTTCGGCCGCCATGCCGGAGGCGAGGCAGCTGCCACTGGCGCTGGCGACGAGCGTCACGCC GGATTACCTGAAGGTGATGGGGATCGCGCTGCAGCACGGACGCTTCTTCGACGAGCATGACCGGCTGGACAGTGAGCTGG TGGTGGCGATCGACGACGTGATGGCGAAGCAGGCATTCCGAGGCGACGACCCAATCGGCAAGCGCCTGTGGATCCCGGAT ATGAGCGCGGGTCCGGTACGGGTGGTCGGCGTGGTGGGGCATGTGCGGCATTGGGGACTGGCGGGCGATGACCAGGCCAA GGTGCGCGCGCAGGTGTACTATCCCTTCGCGCAGGTGCCGGACCGGCTGGTGCGGCGGTGGTCGGAATTGATGTCAGTGG CGGTGAGGACGAACGTGCCGCCGTTGGGCGTGGTAGAGCCGCTGCGGCGCGCGGTGAGGGGCGCTGGGGGCGACCAGGTG CTGTACCAGGTGCGCACGATGGAGCAACTGGCGCAAAGTTCGATCGGGCGGCAGCGATTCCTGATGCTGCTCTTCGGCAT CTTCGCGATGCTGGCGCTGGCCCTGGCATCGATCGGGATTTACGGTGTGCTGGCGTATTTGACGCGGCAGCGGGTGCCGG AGATCGGGATGCGGATGGCGCTCGGGGCGACTTCGCGCGATGTGATCGGAATGGTGCTGCGGCAGAGCCTTGGGATGATC GCGGCTGGGGTTGTGGTCGGATTGGCGGCGGCACTGGCGATGCGGCGCGTGTTGGAGCGGCTGGTGGAGGGGATGAGGCC GATGGATCCGGTGACGGTGGCCTTGATGATCGGCGTGCTGGTGGCGGCGGCGCTGGCGGCGAGCTTCGTGCCGGCACTCA GGGCGAGCAGGGTGGACCCGATGGCGGCGCTGCGTGCGGAGAGGTGA
Upstream 100 bases:
>100_bases ACTCGGAAGGGGCGCGGCCAGCTGGAGACGGAGACGGCGAGTTGGGAGCGGCTTGCCGAGGCCGTGGGACTCATCCTTAG ACTGACCGGGGAGGCGTGAG
Downstream 100 bases:
>100_bases GGTCGCCGAGTGCAGCACGGTCGAAAACCCCACTGCTCCGAAGAGAGATGGGCAACCAGGAATCGCGAGATCGCTCCCTT TACGCAAGGCGTGAAAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 868; Mature: 868
Protein sequence:
>868_residues MNWEDRLDKELRFHLEQHTADLIAQGHTPDAARRIARIALGGPDQVKEGCRDERPARWLADFWQDVRYAVRSLRQRPGFT AVALGTLALGIGATTVMFTLINGVLLKPLPYSDPGRLIQVAGHTAQYGNQNFAYPDYLDLRREIQSLGPLAGWVYNWGTL SQPGDPENVEVREVTADLFPVLGAKMLRGRGFLPEEDAPGGRPVAILGYSLWQRKFAGSAEAIDAPVVLDGTRYTVVGIA RPEMRLEGEPDVFTPLGQDPAAYLRNRRAHPVGVLGRLRPGVTLAQAQSEVAVLAGRLSAQYPESNKDRAFVADRLRADV GDVQSTLWLLLGAVTLVLLIACVNVASLLLAKAVARERELAMRMALGAGRWRLVRQCLTESAVLGFAGGVVGVVLAAVGI RPFVAFWPGSLPRAEEVQLDWRVLLFAVAASLVSGILFGLAPALRAPVRQLEQALRSGGRAVAGSPRRLHGGFVAAEIAL AVVLLVAAGMLGRTLMNLAALEPGVNLHNVLVARMRLAPSTVSSPAAMRAAWQSALDEARRVPGVQAAATVDTVPMRQGN NQLGYWTSAAMPEARQLPLALATSVTPDYLKVMGIALQHGRFFDEHDRLDSELVVAIDDVMAKQAFRGDDPIGKRLWIPD MSAGPVRVVGVVGHVRHWGLAGDDQAKVRAQVYYPFAQVPDRLVRRWSELMSVAVRTNVPPLGVVEPLRRAVRGAGGDQV LYQVRTMEQLAQSSIGRQRFLMLLFGIFAMLALALASIGIYGVLAYLTRQRVPEIGMRMALGATSRDVIGMVLRQSLGMI AAGVVVGLAAALAMRRVLERLVEGMRPMDPVTVALMIGVLVAAALAASFVPALRASRVDPMAALRAER
Sequences:
>Translated_868_residues MNWEDRLDKELRFHLEQHTADLIAQGHTPDAARRIARIALGGPDQVKEGCRDERPARWLADFWQDVRYAVRSLRQRPGFT AVALGTLALGIGATTVMFTLINGVLLKPLPYSDPGRLIQVAGHTAQYGNQNFAYPDYLDLRREIQSLGPLAGWVYNWGTL SQPGDPENVEVREVTADLFPVLGAKMLRGRGFLPEEDAPGGRPVAILGYSLWQRKFAGSAEAIDAPVVLDGTRYTVVGIA RPEMRLEGEPDVFTPLGQDPAAYLRNRRAHPVGVLGRLRPGVTLAQAQSEVAVLAGRLSAQYPESNKDRAFVADRLRADV GDVQSTLWLLLGAVTLVLLIACVNVASLLLAKAVARERELAMRMALGAGRWRLVRQCLTESAVLGFAGGVVGVVLAAVGI RPFVAFWPGSLPRAEEVQLDWRVLLFAVAASLVSGILFGLAPALRAPVRQLEQALRSGGRAVAGSPRRLHGGFVAAEIAL AVVLLVAAGMLGRTLMNLAALEPGVNLHNVLVARMRLAPSTVSSPAAMRAAWQSALDEARRVPGVQAAATVDTVPMRQGN NQLGYWTSAAMPEARQLPLALATSVTPDYLKVMGIALQHGRFFDEHDRLDSELVVAIDDVMAKQAFRGDDPIGKRLWIPD MSAGPVRVVGVVGHVRHWGLAGDDQAKVRAQVYYPFAQVPDRLVRRWSELMSVAVRTNVPPLGVVEPLRRAVRGAGGDQV LYQVRTMEQLAQSSIGRQRFLMLLFGIFAMLALALASIGIYGVLAYLTRQRVPEIGMRMALGATSRDVIGMVLRQSLGMI AAGVVVGLAAALAMRRVLERLVEGMRPMDPVTVALMIGVLVAAALAASFVPALRASRVDPMAALRAER >Mature_868_residues MNWEDRLDKELRFHLEQHTADLIAQGHTPDAARRIARIALGGPDQVKEGCRDERPARWLADFWQDVRYAVRSLRQRPGFT AVALGTLALGIGATTVMFTLINGVLLKPLPYSDPGRLIQVAGHTAQYGNQNFAYPDYLDLRREIQSLGPLAGWVYNWGTL SQPGDPENVEVREVTADLFPVLGAKMLRGRGFLPEEDAPGGRPVAILGYSLWQRKFAGSAEAIDAPVVLDGTRYTVVGIA RPEMRLEGEPDVFTPLGQDPAAYLRNRRAHPVGVLGRLRPGVTLAQAQSEVAVLAGRLSAQYPESNKDRAFVADRLRADV GDVQSTLWLLLGAVTLVLLIACVNVASLLLAKAVARERELAMRMALGAGRWRLVRQCLTESAVLGFAGGVVGVVLAAVGI RPFVAFWPGSLPRAEEVQLDWRVLLFAVAASLVSGILFGLAPALRAPVRQLEQALRSGGRAVAGSPRRLHGGFVAAEIAL AVVLLVAAGMLGRTLMNLAALEPGVNLHNVLVARMRLAPSTVSSPAAMRAAWQSALDEARRVPGVQAAATVDTVPMRQGN NQLGYWTSAAMPEARQLPLALATSVTPDYLKVMGIALQHGRFFDEHDRLDSELVVAIDDVMAKQAFRGDDPIGKRLWIPD MSAGPVRVVGVVGHVRHWGLAGDDQAKVRAQVYYPFAQVPDRLVRRWSELMSVAVRTNVPPLGVVEPLRRAVRGAGGDQV LYQVRTMEQLAQSSIGRQRFLMLLFGIFAMLALALASIGIYGVLAYLTRQRVPEIGMRMALGATSRDVIGMVLRQSLGMI AAGVVVGLAAALAMRRVLERLVEGMRPMDPVTVALMIGVLVAAALAASFVPALRASRVDPMAALRAER
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=314, Percent_Identity=23.5668789808917, Blast_Score=76, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 93850; Mature: 93850
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWEDRLDKELRFHLEQHTADLIAQGHTPDAARRIARIALGGPDQVKEGCRDERPARWLA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHH DFWQDVRYAVRSLRQRPGFTAVALGTLALGIGATTVMFTLINGVLLKPLPYSDPGRLIQV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE AGHTAQYGNQNFAYPDYLDLRREIQSLGPLAGWVYNWGTLSQPGDPENVEVREVTADLFP CCCHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH VLGAKMLRGRGFLPEEDAPGGRPVAILGYSLWQRKFAGSAEAIDAPVVLDGTRYTVVGIA HHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCHHCCCCEEECCCEEEEEEEE RPEMRLEGEPDVFTPLGQDPAAYLRNRRAHPVGVLGRLRPGVTLAQAQSEVAVLAGRLSA CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHC QYPESNKDRAFVADRLRADVGDVQSTLWLLLGAVTLVLLIACVNVASLLLAKAVAREREL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMRMALGAGRWRLVRQCLTESAVLGFAGGVVGVVLAAVGIRPFVAFWPGSLPRAEEVQLD HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH WRVLLFAVAASLVSGILFGLAPALRAPVRQLEQALRSGGRAVAGSPRRLHGGFVAAEIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHCHHHHHHHHH AVVLLVAAGMLGRTLMNLAALEPGVNLHNVLVARMRLAPSTVSSPAAMRAAWQSALDEAR HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH RVPGVQAAATVDTVPMRQGNNQLGYWTSAAMPEARQLPLALATSVTPDYLKVMGIALQHG HCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCHHHHCCHHHHHCCCHHHHHHHHHHHHCC RFFDEHDRLDSELVVAIDDVMAKQAFRGDDPIGKRLWIPDMSAGPVRVVGVVGHVRHWGL CCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEHHHHHHHHHCCC AGDDQAKVRAQVYYPFAQVPDRLVRRWSELMSVAVRTNVPPLGVVEPLRRAVRGAGGDQV CCCCCHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHH LYQVRTMEQLAQSSIGRQRFLMLLFGIFAMLALALASIGIYGVLAYLTRQRVPEIGMRMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LGATSRDVIGMVLRQSLGMIAAGVVVGLAAALAMRRVLERLVEGMRPMDPVTVALMIGVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH VAAALAASFVPALRASRVDPMAALRAER HHHHHHHHHHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure MNWEDRLDKELRFHLEQHTADLIAQGHTPDAARRIARIALGGPDQVKEGCRDERPARWLA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHH DFWQDVRYAVRSLRQRPGFTAVALGTLALGIGATTVMFTLINGVLLKPLPYSDPGRLIQV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE AGHTAQYGNQNFAYPDYLDLRREIQSLGPLAGWVYNWGTLSQPGDPENVEVREVTADLFP CCCHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH VLGAKMLRGRGFLPEEDAPGGRPVAILGYSLWQRKFAGSAEAIDAPVVLDGTRYTVVGIA HHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCHHCCCCEEECCCEEEEEEEE RPEMRLEGEPDVFTPLGQDPAAYLRNRRAHPVGVLGRLRPGVTLAQAQSEVAVLAGRLSA CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHC QYPESNKDRAFVADRLRADVGDVQSTLWLLLGAVTLVLLIACVNVASLLLAKAVAREREL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMRMALGAGRWRLVRQCLTESAVLGFAGGVVGVVLAAVGIRPFVAFWPGSLPRAEEVQLD HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH WRVLLFAVAASLVSGILFGLAPALRAPVRQLEQALRSGGRAVAGSPRRLHGGFVAAEIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHCHHHHHHHHH AVVLLVAAGMLGRTLMNLAALEPGVNLHNVLVARMRLAPSTVSSPAAMRAAWQSALDEAR HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH RVPGVQAAATVDTVPMRQGNNQLGYWTSAAMPEARQLPLALATSVTPDYLKVMGIALQHG HCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCHHHHCCHHHHHCCCHHHHHHHHHHHHCC RFFDEHDRLDSELVVAIDDVMAKQAFRGDDPIGKRLWIPDMSAGPVRVVGVVGHVRHWGL CCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEHHHHHHHHHCCC AGDDQAKVRAQVYYPFAQVPDRLVRRWSELMSVAVRTNVPPLGVVEPLRRAVRGAGGDQV CCCCCHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHH LYQVRTMEQLAQSSIGRQRFLMLLFGIFAMLALALASIGIYGVLAYLTRQRVPEIGMRMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH LGATSRDVIGMVLRQSLGMIAAGVVVGLAAALAMRRVLERLVEGMRPMDPVTVALMIGVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH VAAALAASFVPALRASRVDPMAALRAER HHHHHHHHHHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA