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The map label for this gene is 116622890

Identifier: 116622890

GI number: 116622890

Start: 4812949

End: 4813815

Strand: Direct

Name: 116622890

Synonym: Acid_3791

Alternate gene names: NA

Gene position: 4812949-4813815 (Clockwise)

Preceding gene: 116622888

Following gene: 116622891

Centisome position: 48.3

GC content: 62.4

Gene sequence:

>867_bases
ATGCGTACAAAACTCTTCGTTACGATCGTCACCGCCGGCTTGACCGCGGCACTCAACGCTCAAGTTACGGGCAGCGGCAC
GGCAGGACAGATCCCCGTCTGGGTCGGTTCGGGCTCGACCACCGCGATTGGAAACTCAATTCTCTTTCAGTCCTCCAGCC
AGGTTTTTCCCGCCCCGCCGACACCCGGCATCGGACAGCCCCTTAAAACTCCAGTACCCGAAACGCGAGTTGGCGTAGGG
ACCCAGAGCCCGCAAACGCAGCTTCACGTCGCCGGGCGAATCGCCACAGGTATGAACACGGGCTCTGCCGGAGCCATCAC
TCTATTTCCCGCCGATGGCGCTGCGTGGTTTCATATCGACAATTTCTCCCTGGGACAGCCGCTCGGACGGCTTCGCATCT
CGCACGGCCCCAATCCGGGAGCGAATGAAGTTGTCAGCATCCGGCAGGACGGCAACGTGGGGATCGGGAATCCGGACCCG
AGGTACAAGCTGGAAGTCGCGGGAGATATCAACATTACGGGAGGCGTGTATGCCAACGGTCAGGCGCTCGGGCTGCAGGG
CCAGGCCGGAGATAAGGGATCGAAGGGTGACAAAGGCGATCAGGGCCTGAAAGGCGATCCCGGAATTGGCGGACTGAAAG
GCGACAAAGGCGATAAGGGCGACAAGGGACTCAAAGGCGACAAGGGCGACGCCGGCGCCCCATCCAAATCCGTGGCGGCC
TGTTTCGGCGGCGGCGCGCAGGTGTGTTCCTGCCCCAGCGGCAAGCTGCTGATTTCCCAAGCTGCCCCGTGCACCGTAAC
GGCGGATACCGGAACCTGCGGCTGGCCTGGCACCTCGGCCGGACGATGCTGCGTTTGCAAACCGTAA

Upstream 100 bases:

>100_bases
GCATAGGATGCGCCCGCCCTCAGCCGTGATTCGCCGGTTGTCATTTTCGGATGATACGTTTTCCTTCCGTTTCTTGCATT
GCTAGACAAGGAGACAAATC

Downstream 100 bases:

>100_bases
TGAGTCGAGTCGTGAAAACTTCATTTGAAAGGACGGAAAAACTGCCATGATGCGATTGACTGTAGCTTTGATATTGACCG
CCGGCGCCTACGCGCAAGTG

Product: triple helix repeat-containing collagen

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRTKLFVTIVTAGLTAALNAQVTGSGTAGQIPVWVGSGSTTAIGNSILFQSSSQVFPAPPTPGIGQPLKTPVPETRVGVG
TQSPQTQLHVAGRIATGMNTGSAGAITLFPADGAAWFHIDNFSLGQPLGRLRISHGPNPGANEVVSIRQDGNVGIGNPDP
RYKLEVAGDINITGGVYANGQALGLQGQAGDKGSKGDKGDQGLKGDPGIGGLKGDKGDKGDKGLKGDKGDAGAPSKSVAA
CFGGGAQVCSCPSGKLLISQAAPCTVTADTGTCGWPGTSAGRCCVCKP

Sequences:

>Translated_288_residues
MRTKLFVTIVTAGLTAALNAQVTGSGTAGQIPVWVGSGSTTAIGNSILFQSSSQVFPAPPTPGIGQPLKTPVPETRVGVG
TQSPQTQLHVAGRIATGMNTGSAGAITLFPADGAAWFHIDNFSLGQPLGRLRISHGPNPGANEVVSIRQDGNVGIGNPDP
RYKLEVAGDINITGGVYANGQALGLQGQAGDKGSKGDKGDQGLKGDPGIGGLKGDKGDKGDKGLKGDKGDAGAPSKSVAA
CFGGGAQVCSCPSGKLLISQAAPCTVTADTGTCGWPGTSAGRCCVCKP
>Mature_288_residues
MRTKLFVTIVTAGLTAALNAQVTGSGTAGQIPVWVGSGSTTAIGNSILFQSSSQVFPAPPTPGIGQPLKTPVPETRVGVG
TQSPQTQLHVAGRIATGMNTGSAGAITLFPADGAAWFHIDNFSLGQPLGRLRISHGPNPGANEVVSIRQDGNVGIGNPDP
RYKLEVAGDINITGGVYANGQALGLQGQAGDKGSKGDKGDQGLKGDPGIGGLKGDKGDKGDKGLKGDKGDAGAPSKSVAA
CFGGGAQVCSCPSGKLLISQAAPCTVTADTGTCGWPGTSAGRCCVCKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28587; Mature: 28587

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTKLFVTIVTAGLTAALNAQVTGSGTAGQIPVWVGSGSTTAIGNSILFQSSSQVFPAPP
CCCEEEEEEEECCCEEEEEEEEECCCCCCEEEEEECCCCCEECCCEEEEECCCCEECCCC
TPGIGQPLKTPVPETRVGVGTQSPQTQLHVAGRIATGMNTGSAGAITLFPADGAAWFHID
CCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCEEEEEEC
NFSLGQPLGRLRISHGPNPGANEVVSIRQDGNVGIGNPDPRYKLEVAGDINITGGVYANG
CCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCEEECCCEEECC
QALGLQGQAGDKGSKGDKGDQGLKGDPGIGGLKGDKGDKGDKGLKGDKGDAGAPSKSVAA
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHE
CFGGGAQVCSCPSGKLLISQAAPCTVTADTGTCGWPGTSAGRCCVCKP
EECCCCEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MRTKLFVTIVTAGLTAALNAQVTGSGTAGQIPVWVGSGSTTAIGNSILFQSSSQVFPAPP
CCCEEEEEEEECCCEEEEEEEEECCCCCCEEEEEECCCCCEECCCEEEEECCCCEECCCC
TPGIGQPLKTPVPETRVGVGTQSPQTQLHVAGRIATGMNTGSAGAITLFPADGAAWFHID
CCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCEEEEEEC
NFSLGQPLGRLRISHGPNPGANEVVSIRQDGNVGIGNPDPRYKLEVAGDINITGGVYANG
CCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCEEECCCEEECC
QALGLQGQAGDKGSKGDKGDQGLKGDPGIGGLKGDKGDKGDKGLKGDKGDAGAPSKSVAA
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHE
CFGGGAQVCSCPSGKLLISQAAPCTVTADTGTCGWPGTSAGRCCVCKP
EECCCCEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA