| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622887
Identifier: 116622887
GI number: 116622887
Start: 4809243
End: 4811369
Strand: Direct
Name: 116622887
Synonym: Acid_3788
Alternate gene names: NA
Gene position: 4809243-4811369 (Clockwise)
Preceding gene: 116622886
Following gene: 116622888
Centisome position: 48.26
GC content: 65.44
Gene sequence:
>2127_bases TTGCAGGCACTGACAATTCTTGCCTCCGCTGCTTTCACCGCCGCAACCTGCCTCGCGCTCGGCGCCCTGCTGCTCGGCGA TGCATGCCGCGACGCAGGTGCGCGCTTCGTGACCGGCGCCGCGATCCTCAGCCTGGTCGTCTTCGCCCTGTGCAGCGCCG GCCTCGCGTACCCGGTAGCGTTCTTTGCCATTGGAGCCGCCGCCATCGCGATCGCCCGCCCCCGCGTCGCCGGACCCCTA TGGAGCTGGTGGCTGCTGCCCTTCGCCGTCTATTTCGTGATCTACCTGGCCTTCGCCATGGCGCCCGAGGCCAGCCCGGA TGGCGCGGGTTACCATCTGGGACTGGTGCAGCGCTACCTCGGCGCGCATGGTTTCGTCGCCATCACCGACAACTTCTACG CGGCCATGCCGGGCGGCGTAGAGATGCTCTTCCTTTTCGCCTTTGCATTCGGCCGGCACTCGGCAGCCGCGATGGTCCAC TTCACCTTCCTAGTAGCGCTCGCTTGGCAGATCTATAGCTACGCGCGCCGCGCCGGATTCCCCGTGGCTGGTGCGAGCGC CGCGCTGCTCATTTTCGCCAGCCCGGCGGTCGGCATCGATGGCACCAGCGCGTATAACGATGTCGCCCTCGCGGCCATCG CGTTCACGCTCTTTCACCTGCTGCAAATCTGGATCGCAGATCGTGCGCCAGGCGTGTTGTGCGCCGTAGGCCTGCTTGCG GGCTTCGCCTTCGCTTCCAAATACACGGCGTGGCCGGCAGTGATCTACGCCGTCGGCATGGTCGCATGGAAGAATCGCAG GGCCGCGGCGTGGGTAGCGGCATTCGCCGCGATCATGATCGCGCCGTGGCTGCTCAAGAACTGGATCTACCTGCAAAATC CCGTTGCGCCGTTCTTCAATCGCTGGTTCCCGAACCCATACGTGAGCGTCGCCTTCGAGGATACCTACCGCCGCCTGATG GCGATCTACCAGTTGAGATCGCGCTGGCAGCTCCCCATGGAAGTCACCACATATGGGACCATCTCCGGCTTGCTCGGCCC TGTCTTTCTGCTCTCCCCGCTGGCGCTGCTCGCCCTGCGCCGCCGCGAAGGCCGGCAGCTGCTGCTGGCCGCCCTGGTCT TCGGCCTTAACTATTTCAGCAACGTTGCGGCGCGCTTTCTGATTCCGCCGCTCCCTTTCGTCACGCTCGCCATGATGCTC GGCATCAGCGCCATCCCGCAACTCGCGGTCGTGCTCGCGCTCCTTCACTGCGTGATTTCCTGGCCGGCGCTGGTGCCGCG GTACGCGAACCACGAAGCGTGGCGTCTCGCCCGAATTCCCTGGAAGGAAGCGCTGCGCATCAAGCCCGAGGCGCCGTACC TGGAGTCGCACCTCGCCGGCTATGCCGCCGACCGTTTGATCGAGCGCAACACGCCTCCCGGCGCCACCATCTTTACCTTC ACGCCGATTCCCGAGGCCTACACCTCGCGCCACATCCGCGTGGAATACCAGGCCGCACCCAACCAGATCGCGGGCAAGAT CCTCTGGACCGCGACCCAGCCCGAGTACGCACCCACCTTGCGCTTGCGCTTTACCTTCCCCCGCCGAAAATTGCACGGCG TGCGCGTAGTGCAAACCGCCACCGGCGACGACTTCTGGAACGTGCACGAACTCCGCATCCTGGATGGCGAGCACGAGTTG CCGCGCGCCGCGAACTGGCGCCTCACCGCCAAGCCTTATCCCTGGGGCGTGCAGGATGCCTTCGACAATTCGCTCGCGAC CTTTTGGATCTGCGGCGACACCCTGAAACCCGGCGAGTTTCTCGCGGTAGAGTTCCATGGCGGGGAGACCGCCGACGCCG TCGTAATCGAGACCGCGCCCAATCAGCCCGGCGCACGCCTGCGCCTTGAGGGCCTCGACGATACCGGACGCTGGCAACTG CTCGCGGCCGCACCGCAACCTTCCGAGGCCGCGCGCCCCCTGGGCTTGCGCCGTGCCGTGATCGCCGAACTCAAACATCG CGGCATCGACTACCTCCTGGTCTTCGATCGCGACGAGGGCGCCAATGACCTGCGCCTCAATACGGACATCTGGGGCCTGC GCGTCGTGGGCGAAGATAAAGGAGCGAGACTCTACCAATTACCATGA
Upstream 100 bases:
>100_bases CAATCTGGTCGCGATCGACCCCGACCCTGTCTGGGTCTCCACGGCCGATGGCGGCCGGCTCGGGTTCATCCTCTCCCGCG CCGGGTTCACGGAGTAACGG
Downstream 100 bases:
>100_bases GACTGTTTCTGGGAGTGGACGGCGGCCAATCCGGCACTGCTGCGATCATTGGCGACGAAACCGGCCGCGTCCTCGGCGCC GGGGAAGGCGGTCCGTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 708; Mature: 708
Protein sequence:
>708_residues MQALTILASAAFTAATCLALGALLLGDACRDAGARFVTGAAILSLVVFALCSAGLAYPVAFFAIGAAAIAIARPRVAGPL WSWWLLPFAVYFVIYLAFAMAPEASPDGAGYHLGLVQRYLGAHGFVAITDNFYAAMPGGVEMLFLFAFAFGRHSAAAMVH FTFLVALAWQIYSYARRAGFPVAGASAALLIFASPAVGIDGTSAYNDVALAAIAFTLFHLLQIWIADRAPGVLCAVGLLA GFAFASKYTAWPAVIYAVGMVAWKNRRAAAWVAAFAAIMIAPWLLKNWIYLQNPVAPFFNRWFPNPYVSVAFEDTYRRLM AIYQLRSRWQLPMEVTTYGTISGLLGPVFLLSPLALLALRRREGRQLLLAALVFGLNYFSNVAARFLIPPLPFVTLAMML GISAIPQLAVVLALLHCVISWPALVPRYANHEAWRLARIPWKEALRIKPEAPYLESHLAGYAADRLIERNTPPGATIFTF TPIPEAYTSRHIRVEYQAAPNQIAGKILWTATQPEYAPTLRLRFTFPRRKLHGVRVVQTATGDDFWNVHELRILDGEHEL PRAANWRLTAKPYPWGVQDAFDNSLATFWICGDTLKPGEFLAVEFHGGETADAVVIETAPNQPGARLRLEGLDDTGRWQL LAAAPQPSEAARPLGLRRAVIAELKHRGIDYLLVFDRDEGANDLRLNTDIWGLRVVGEDKGARLYQLP
Sequences:
>Translated_708_residues MQALTILASAAFTAATCLALGALLLGDACRDAGARFVTGAAILSLVVFALCSAGLAYPVAFFAIGAAAIAIARPRVAGPL WSWWLLPFAVYFVIYLAFAMAPEASPDGAGYHLGLVQRYLGAHGFVAITDNFYAAMPGGVEMLFLFAFAFGRHSAAAMVH FTFLVALAWQIYSYARRAGFPVAGASAALLIFASPAVGIDGTSAYNDVALAAIAFTLFHLLQIWIADRAPGVLCAVGLLA GFAFASKYTAWPAVIYAVGMVAWKNRRAAAWVAAFAAIMIAPWLLKNWIYLQNPVAPFFNRWFPNPYVSVAFEDTYRRLM AIYQLRSRWQLPMEVTTYGTISGLLGPVFLLSPLALLALRRREGRQLLLAALVFGLNYFSNVAARFLIPPLPFVTLAMML GISAIPQLAVVLALLHCVISWPALVPRYANHEAWRLARIPWKEALRIKPEAPYLESHLAGYAADRLIERNTPPGATIFTF TPIPEAYTSRHIRVEYQAAPNQIAGKILWTATQPEYAPTLRLRFTFPRRKLHGVRVVQTATGDDFWNVHELRILDGEHEL PRAANWRLTAKPYPWGVQDAFDNSLATFWICGDTLKPGEFLAVEFHGGETADAVVIETAPNQPGARLRLEGLDDTGRWQL LAAAPQPSEAARPLGLRRAVIAELKHRGIDYLLVFDRDEGANDLRLNTDIWGLRVVGEDKGARLYQLP >Mature_708_residues MQALTILASAAFTAATCLALGALLLGDACRDAGARFVTGAAILSLVVFALCSAGLAYPVAFFAIGAAAIAIARPRVAGPL WSWWLLPFAVYFVIYLAFAMAPEASPDGAGYHLGLVQRYLGAHGFVAITDNFYAAMPGGVEMLFLFAFAFGRHSAAAMVH FTFLVALAWQIYSYARRAGFPVAGASAALLIFASPAVGIDGTSAYNDVALAAIAFTLFHLLQIWIADRAPGVLCAVGLLA GFAFASKYTAWPAVIYAVGMVAWKNRRAAAWVAAFAAIMIAPWLLKNWIYLQNPVAPFFNRWFPNPYVSVAFEDTYRRLM AIYQLRSRWQLPMEVTTYGTISGLLGPVFLLSPLALLALRRREGRQLLLAALVFGLNYFSNVAARFLIPPLPFVTLAMML GISAIPQLAVVLALLHCVISWPALVPRYANHEAWRLARIPWKEALRIKPEAPYLESHLAGYAADRLIERNTPPGATIFTF TPIPEAYTSRHIRVEYQAAPNQIAGKILWTATQPEYAPTLRLRFTFPRRKLHGVRVVQTATGDDFWNVHELRILDGEHEL PRAANWRLTAKPYPWGVQDAFDNSLATFWICGDTLKPGEFLAVEFHGGETADAVVIETAPNQPGARLRLEGLDDTGRWQL LAAAPQPSEAARPLGLRRAVIAELKHRGIDYLLVFDRDEGANDLRLNTDIWGLRVVGEDKGARLYQLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77724; Mature: 77724
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQALTILASAAFTAATCLALGALLLGDACRDAGARFVTGAAILSLVVFALCSAGLAYPVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHH FFAIGAAAIAIARPRVAGPLWSWWLLPFAVYFVIYLAFAMAPEASPDGAGYHLGLVQRYL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH GAHGFVAITDNFYAAMPGGVEMLFLFAFAFGRHSAAAMVHFTFLVALAWQIYSYARRAGF CCCCEEEEECCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PVAGASAALLIFASPAVGIDGTSAYNDVALAAIAFTLFHLLQIWIADRAPGVLCAVGLLA CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH GFAFASKYTAWPAVIYAVGMVAWKNRRAAAWVAAFAAIMIAPWLLKNWIYLQNPVAPFFN HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHH RWFPNPYVSVAFEDTYRRLMAIYQLRSRWQLPMEVTTYGTISGLLGPVFLLSPLALLALR HHCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH RREGRQLLLAALVFGLNYFSNVAARFLIPPLPFVTLAMMLGISAIPQLAVVLALLHCVIS HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WPALVPRYANHEAWRLARIPWKEALRIKPEAPYLESHLAGYAADRLIERNTPPGATIFTF HHHHCCCCCCCCCEEEECCCHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE TPIPEAYTSRHIRVEYQAAPNQIAGKILWTATQPEYAPTLRLRFTFPRRKLHGVRVVQTA CCCCHHHCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEECCHHHHCCEEEEEEC TGDDFWNVHELRILDGEHELPRAANWRLTAKPYPWGVQDAFDNSLATFWICGDTLKPGEF CCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCHHHHCCCCEEEEEECCCCCCCCE LAVEFHGGETADAVVIETAPNQPGARLRLEGLDDTGRWQLLAAAPQPSEAARPLGLRRAV EEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCHHCCCCHHHHHH IAELKHRGIDYLLVFDRDEGANDLRLNTDIWGLRVVGEDKGARLYQLP HHHHHHCCCCEEEEEECCCCCCCEEEECCEEEEEEEECCCCCEEECCC >Mature Secondary Structure MQALTILASAAFTAATCLALGALLLGDACRDAGARFVTGAAILSLVVFALCSAGLAYPVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHH FFAIGAAAIAIARPRVAGPLWSWWLLPFAVYFVIYLAFAMAPEASPDGAGYHLGLVQRYL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH GAHGFVAITDNFYAAMPGGVEMLFLFAFAFGRHSAAAMVHFTFLVALAWQIYSYARRAGF CCCCEEEEECCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PVAGASAALLIFASPAVGIDGTSAYNDVALAAIAFTLFHLLQIWIADRAPGVLCAVGLLA CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH GFAFASKYTAWPAVIYAVGMVAWKNRRAAAWVAAFAAIMIAPWLLKNWIYLQNPVAPFFN HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHH RWFPNPYVSVAFEDTYRRLMAIYQLRSRWQLPMEVTTYGTISGLLGPVFLLSPLALLALR HHCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH RREGRQLLLAALVFGLNYFSNVAARFLIPPLPFVTLAMMLGISAIPQLAVVLALLHCVIS HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WPALVPRYANHEAWRLARIPWKEALRIKPEAPYLESHLAGYAADRLIERNTPPGATIFTF HHHHCCCCCCCCCEEEECCCHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE TPIPEAYTSRHIRVEYQAAPNQIAGKILWTATQPEYAPTLRLRFTFPRRKLHGVRVVQTA CCCCHHHCCCEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEECCHHHHCCEEEEEEC TGDDFWNVHELRILDGEHELPRAANWRLTAKPYPWGVQDAFDNSLATFWICGDTLKPGEF CCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCHHHHCCCCEEEEEECCCCCCCCE LAVEFHGGETADAVVIETAPNQPGARLRLEGLDDTGRWQLLAAAPQPSEAARPLGLRRAV EEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCHHCCCCHHHHHH IAELKHRGIDYLLVFDRDEGANDLRLNTDIWGLRVVGEDKGARLYQLP HHHHHHCCCCEEEEEECCCCCCCEEEECCEEEEEEEECCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA