Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

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The map label for this gene is 116622799

Identifier: 116622799

GI number: 116622799

Start: 4699544

End: 4700938

Strand: Direct

Name: 116622799

Synonym: Acid_3699

Alternate gene names: NA

Gene position: 4699544-4700938 (Clockwise)

Preceding gene: 116622795

Following gene: 116622800

Centisome position: 47.16

GC content: 62.08

Gene sequence:

>1395_bases
ATGATTGCCGGCATGACGGCATCATCCATCGGTCTGCTGTTTCTCGCGGGGGCCGGGACAAGTCCGGCGCAATCGAACGA
TACGGCACTGATCGCCAGGGCTAAGGCGATCCACAGCCGCGTTATCAAGCTCGACACGCACAACGATATCGAGCCCGCGA
ACTTCACGCCGGACTGCAACTACACCATGCGGCTGACGACGCAGGTCAATATTCCGAAGATGGTGGAGGGCGGCATGGAC
GTTTCGTTTATGATCGCGTACGTGGGCCAGGGCCCGCTCACACCCGAGGGGTTCGACGACGCATACCGGCAGGTGGTCGC
GAAGTTCGATGCCGTTCATCGCCTGACGGAAAAGATCGCACCCGACAATATCGGACTGGCGCTCACTCCGGCCGACGTGC
TGGCGTTGCACAAGAAGAACCTCCGGATCGCGGTGATCGGTATCGAGAACGGATATCCCATCGGGAACGACATCAAGCGG
GTGAAGGAGTTCTACGACCGCGGCGGCCGTTATATGTCCCTGGCTCACAATGGCAACAGCCAGTTGGCCGATTCGAATAC
CGGGGAAGTTCAGGGCTACCTGTACAACAATGGACTTTCTCCCCTGGGGCGCGAGGTCATCGCCGAGATGAATCGCCTGG
GCATGATGGTCGATCTCTCGCATCCTTCGAAGGGCGCGAACATGGAAGCCATCCGGCTTTCCAAGGCTCCGGTCATCGCA
TCGCACTCCGGCGTCCGCGCGCTCGCCGACGTCAGCCGGAATATGGACGACGAGCAGTTGCTGGCGTTGAAAAAGAATGG
CGGCGTGATTCAGGTGGTGGGCTTCACGTCTTATGTGAAGACGGATTCGAAAGAACGCACCGAGGCGCTCGCGAAGTTGC
GGGAAGAGTTTGGGCTGACTCAGGCGGCTGGACGCGGAGGCGCGGGATTCGGCGGAGGCCGCGGACGCGGCGGCGCCGCG
GCGAATACGTCGCGGACGTGCCCCGTAGAGGTGCCCGGAGCTGCGCCGCAGGTTCGTGGAGCGGGCGGAGGCCGGGGGCG
GGGAAATGCGGCGCTCGAGGCGCTTTCGCCGGAGCGGCGCGCCGATTATGACAAGCGGCTGGCGGAGATCGATACCAAGT
TTCCGGCCGCGAGCCGTGCCAACGTCAAGGACTTTGTGAATCACATCGATTACGCGGTGAAGCTGATTGGAATCGATCAC
GTGGGGATTTCGTCGGACTTCGACGGCGGCGGCGGAATCGATGGGTGGAACAGCGCGGCGGAGGCATTCAACGTGACGCT
GGAACTGGTGCGCCGCGGTTACACCGAAGAACAGATCGGGAAGCTGTGGAGCGGCAATCTGCTGCGGGTGTGGGGAGAGG
TGGAGAAGGTCGCGCAAAAGCTGCGGAAGGGGTAA

Upstream 100 bases:

>100_bases
AGGTGTCCGCCGCGACCCCCGTCGGTCTCGCATTTCAACAACGACTTTTATTGTTTTGCGGTTCCAGGAGAATGCAATGA
AAAGCATCCAGCAAAAGCTC

Downstream 100 bases:

>100_bases
GCGAACGGCAGGCCATTGGTTGGAGGTAGAGGGAATCGCCAAGCATCCCCGCCGGGTGTTACATGCTTTCGGCCGCACAA
TCCGCAGCGCTACGGCACAT

Product: membrane dipeptidase

Products: NA

Alternate protein names: Dipeptidase; Peptidase; Renal Dipeptidase Family Protein; Glutamine Amidotransferase Class II/Dipeptidase; Glutamine Amidotransferase; Renal Dipeptidase Superfamily; Periplasmic Dipeptidase; Zn-Dependent Dipeptidase; Dipeptidase Family Protein; Microsomal Dipeptidase; Renal Dipeptidase; M19 Family Peptidase; Thermostable Dipeptidase; Multidrug Resistance Protein B; Zn-Dependent Dipeptidase Microsomal Dipeptidase; Membrane Dipeptidase Family; Renal Dipeptidase Superfamily Protein; Dipeptidase Protein; Amma-Glutamyl Hydrolase Family Peptidase; Microsomal Dipeptidase Like Protein; Dipeptidase Bdp; Membrane-Bound Dipeptidase; Microsomal Dipeptidase-Like Protein; Dipeptidase Pyoverdin Biosynthesis; Ipeptidase AC. Metallo Peptidase. MEROPS Family M; LOW QUALITY PROTEIN Dipeptidase

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MIAGMTASSIGLLFLAGAGTSPAQSNDTALIARAKAIHSRVIKLDTHNDIEPANFTPDCNYTMRLTTQVNIPKMVEGGMD
VSFMIAYVGQGPLTPEGFDDAYRQVVAKFDAVHRLTEKIAPDNIGLALTPADVLALHKKNLRIAVIGIENGYPIGNDIKR
VKEFYDRGGRYMSLAHNGNSQLADSNTGEVQGYLYNNGLSPLGREVIAEMNRLGMMVDLSHPSKGANMEAIRLSKAPVIA
SHSGVRALADVSRNMDDEQLLALKKNGGVIQVVGFTSYVKTDSKERTEALAKLREEFGLTQAAGRGGAGFGGGRGRGGAA
ANTSRTCPVEVPGAAPQVRGAGGGRGRGNAALEALSPERRADYDKRLAEIDTKFPAASRANVKDFVNHIDYAVKLIGIDH
VGISSDFDGGGGIDGWNSAAEAFNVTLELVRRGYTEEQIGKLWSGNLLRVWGEVEKVAQKLRKG

Sequences:

>Translated_464_residues
MIAGMTASSIGLLFLAGAGTSPAQSNDTALIARAKAIHSRVIKLDTHNDIEPANFTPDCNYTMRLTTQVNIPKMVEGGMD
VSFMIAYVGQGPLTPEGFDDAYRQVVAKFDAVHRLTEKIAPDNIGLALTPADVLALHKKNLRIAVIGIENGYPIGNDIKR
VKEFYDRGGRYMSLAHNGNSQLADSNTGEVQGYLYNNGLSPLGREVIAEMNRLGMMVDLSHPSKGANMEAIRLSKAPVIA
SHSGVRALADVSRNMDDEQLLALKKNGGVIQVVGFTSYVKTDSKERTEALAKLREEFGLTQAAGRGGAGFGGGRGRGGAA
ANTSRTCPVEVPGAAPQVRGAGGGRGRGNAALEALSPERRADYDKRLAEIDTKFPAASRANVKDFVNHIDYAVKLIGIDH
VGISSDFDGGGGIDGWNSAAEAFNVTLELVRRGYTEEQIGKLWSGNLLRVWGEVEKVAQKLRKG
>Mature_464_residues
MIAGMTASSIGLLFLAGAGTSPAQSNDTALIARAKAIHSRVIKLDTHNDIEPANFTPDCNYTMRLTTQVNIPKMVEGGMD
VSFMIAYVGQGPLTPEGFDDAYRQVVAKFDAVHRLTEKIAPDNIGLALTPADVLALHKKNLRIAVIGIENGYPIGNDIKR
VKEFYDRGGRYMSLAHNGNSQLADSNTGEVQGYLYNNGLSPLGREVIAEMNRLGMMVDLSHPSKGANMEAIRLSKAPVIA
SHSGVRALADVSRNMDDEQLLALKKNGGVIQVVGFTSYVKTDSKERTEALAKLREEFGLTQAAGRGGAGFGGGRGRGGAA
ANTSRTCPVEVPGAAPQVRGAGGGRGRGNAALEALSPERRADYDKRLAEIDTKFPAASRANVKDFVNHIDYAVKLIGIDH
VGISSDFDGGGGIDGWNSAAEAFNVTLELVRRGYTEEQIGKLWSGNLLRVWGEVEKVAQKLRKG

Specific function: Unknown

COG id: COG2355

COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI11641269, Length=207, Percent_Identity=36.7149758454106, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI189458885, Length=256, Percent_Identity=29.296875, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI4758190, Length=256, Percent_Identity=29.296875, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI193211608, Length=248, Percent_Identity=29.8387096774194, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI193211610, Length=248, Percent_Identity=29.4354838709677, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI221475880, Length=273, Percent_Identity=31.1355311355311, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI161083233, Length=205, Percent_Identity=34.1463414634146, Blast_Score=131, Evalue=1e-30,
Organism=Drosophila melanogaster, GI281362638, Length=249, Percent_Identity=30.5220883534137, Blast_Score=125, Evalue=8e-29,
Organism=Drosophila melanogaster, GI281362636, Length=249, Percent_Identity=30.5220883534137, Blast_Score=125, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49534; Mature: 49534

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAGMTASSIGLLFLAGAGTSPAQSNDTALIARAKAIHSRVIKLDTHNDIEPANFTPDCN
CCCCCCHHCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHEEEECCCCCCCCCCCCCCCC
YTMRLTTQVNIPKMVEGGMDVSFMIAYVGQGPLTPEGFDDAYRQVVAKFDAVHRLTEKIA
EEEEEEEEECCHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
PDNIGLALTPADVLALHKKNLRIAVIGIENGYPIGNDIKRVKEFYDRGGRYMSLAHNGNS
CCCCCEEECHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCC
QLADSNTGEVQGYLYNNGLSPLGREVIAEMNRLGMMVDLSHPSKGANMEAIRLSKAPVIA
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCCEEE
SHSGVRALADVSRNMDDEQLLALKKNGGVIQVVGFTSYVKTDSKERTEALAKLREEFGLT
CCCCHHHHHHHHCCCCHHHEEEEECCCCEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCC
QAAGRGGAGFGGGRGRGGAAANTSRTCPVEVPGAAPQVRGAGGGRGRGNAALEALSPERR
HHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHCCCHHH
ADYDKRLAEIDTKFPAASRANVKDFVNHIDYAVKLIGIDHVGISSDFDGGGGIDGWNSAA
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHH
EAFNVTLELVRRGYTEEQIGKLWSGNLLRVWGEVEKVAQKLRKG
HHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIAGMTASSIGLLFLAGAGTSPAQSNDTALIARAKAIHSRVIKLDTHNDIEPANFTPDCN
CCCCCCHHCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHEEEECCCCCCCCCCCCCCCC
YTMRLTTQVNIPKMVEGGMDVSFMIAYVGQGPLTPEGFDDAYRQVVAKFDAVHRLTEKIA
EEEEEEEEECCHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
PDNIGLALTPADVLALHKKNLRIAVIGIENGYPIGNDIKRVKEFYDRGGRYMSLAHNGNS
CCCCCEEECHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCC
QLADSNTGEVQGYLYNNGLSPLGREVIAEMNRLGMMVDLSHPSKGANMEAIRLSKAPVIA
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEECCCCEEE
SHSGVRALADVSRNMDDEQLLALKKNGGVIQVVGFTSYVKTDSKERTEALAKLREEFGLT
CCCCHHHHHHHHCCCCHHHEEEEECCCCEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCC
QAAGRGGAGFGGGRGRGGAAANTSRTCPVEVPGAAPQVRGAGGGRGRGNAALEALSPERR
HHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHCCCHHH
ADYDKRLAEIDTKFPAASRANVKDFVNHIDYAVKLIGIDHVGISSDFDGGGGIDGWNSAA
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCHHHH
EAFNVTLELVRRGYTEEQIGKLWSGNLLRVWGEVEKVAQKLRKG
HHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA