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The map label for this gene is ygjV [H]

Identifier: 116622779

GI number: 116622779

Start: 4668446

End: 4668997

Strand: Reverse

Name: ygjV [H]

Synonym: Acid_3678

Alternate gene names: 116622779

Gene position: 4668997-4668446 (Counterclockwise)

Preceding gene: 116622780

Following gene: 116622778

Centisome position: 46.85

GC content: 63.04

Gene sequence:

>552_bases
ATGCACTTCTTCGCGCCGGCTCAAGTGGCCGGCTACATTGCGCTGGCTCTCGGCATCACGGCGTTCCTGCAAAAGCACGA
CGACCGCCTCAAACTCTTCAACGCTACGCAGGGCCTGGTTTACGCCCTTCACTTCGTGCTGCTGGGCAACCTGCCCGCCG
GCTCCAGCGCCCTGATCTCGTCGGTGCGATCTTTTCTCGCGCTCCGCTTTCGCTCCGCGCTGCTGGGCGCTGTGATTGTC
GCCGCCAATATCGCGCTCGGCGCCGCCTTCGCCACGAGCAAGAGCGGCTGGCTGCCGGTCATCGCCTCCACGATCGCGAC
TATCGCAATCTTCACGATGCGCGGAATTCCTTTTCGCTGCGTACTGCTCGCCAGCACTCTGCTCTGGTTGGCCAACAATA
TTCTCACCGGCTCGATCGGCGGCACGGTTCTGGAACTCGCCAACGCAGTCCTCAATATCACTACGATGATCCGCATCCGG
TTCGACGCACCGGTTGAAATCGGCGGCAGCGAGCTGGGAGACGGCGCGCGATCGGCGGAGTGGCGAGCGTGA

Upstream 100 bases:

>100_bases
CAGCCATCCTGCAGCGCGCGGCCCGCCTTACTGTCCGGCCCAACGAGACGACGGGGCTTGATCTCACGCTGTCCGCTCTC
CGTTAAAATAAGCGCTTCTC

Downstream 100 bases:

>100_bases
ACGAGGGAGCCGCCTGAAAGGCGGCTGCAGGCAGGATTGCCTGCCCCACAATGCCGGGCCCCTCGAATGTTTGCGGCCTG
CGAGCAGGCAAATGCACAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MHFFAPAQVAGYIALALGITAFLQKHDDRLKLFNATQGLVYALHFVLLGNLPAGSSALISSVRSFLALRFRSALLGAVIV
AANIALGAAFATSKSGWLPVIASTIATIAIFTMRGIPFRCVLLASTLLWLANNILTGSIGGTVLELANAVLNITTMIRIR
FDAPVEIGGSELGDGARSAEWRA

Sequences:

>Translated_183_residues
MHFFAPAQVAGYIALALGITAFLQKHDDRLKLFNATQGLVYALHFVLLGNLPAGSSALISSVRSFLALRFRSALLGAVIV
AANIALGAAFATSKSGWLPVIASTIATIAIFTMRGIPFRCVLLASTLLWLANNILTGSIGGTVLELANAVLNITTMIRIR
FDAPVEIGGSELGDGARSAEWRA
>Mature_183_residues
MHFFAPAQVAGYIALALGITAFLQKHDDRLKLFNATQGLVYALHFVLLGNLPAGSSALISSVRSFLALRFRSALLGAVIV
AANIALGAAFATSKSGWLPVIASTIATIAIFTMRGIPFRCVLLASTLLWLANNILTGSIGGTVLELANAVLNITTMIRIR
FDAPVEIGGSELGDGARSAEWRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789474, Length=152, Percent_Identity=36.1842105263158, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019629 [H]

Pfam domain/function: PF10688 Imp-YgjV [H]

EC number: NA

Molecular weight: Translated: 19268; Mature: 19268

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFFAPAQVAGYIALALGITAFLQKHDDRLKLFNATQGLVYALHFVLLGNLPAGSSALIS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SVRSFLALRFRSALLGAVIVAANIALGAAFATSKSGWLPVIASTIATIAIFTMRGIPFRC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
VLLASTLLWLANNILTGSIGGTVLELANAVLNITTMIRIRFDAPVEIGGSELGDGARSAE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCC
WRA
CCC
>Mature Secondary Structure
MHFFAPAQVAGYIALALGITAFLQKHDDRLKLFNATQGLVYALHFVLLGNLPAGSSALIS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SVRSFLALRFRSALLGAVIVAANIALGAAFATSKSGWLPVIASTIATIAIFTMRGIPFRC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
VLLASTLLWLANNILTGSIGGTVLELANAVLNITTMIRIRFDAPVEIGGSELGDGARSAE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCC
WRA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]