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The map label for this gene is 116622774

Identifier: 116622774

GI number: 116622774

Start: 4662470

End: 4662721

Strand: Reverse

Name: 116622774

Synonym: Acid_3673

Alternate gene names: NA

Gene position: 4662721-4662470 (Counterclockwise)

Preceding gene: 116622777

Following gene: 116622773

Centisome position: 46.79

GC content: 59.92

Gene sequence:

>252_bases
ATGGGGGTCGGGATCCGCTCTCTCGAGTTAGTCATCACCGGCAAAGTGGATGTAGTGGAGTTCCATTTGAGCGCGGATCC
GGTGAGCGGGTGCACCTTGCCCAGCAAACAAGGCCGTTGGGCATCCTACCCGATCGAGTACAAGCGGGGTTGGCCGCGGC
GGGGGGTTGGCGACGACATACAAGTGTGCGCGCAGGCCTTGTGCCATGAAGAAATGCTGCAATGCGCGGTTCTGGCCGGC
GCAATCTATTAA

Upstream 100 bases:

>100_bases
CGACAAGAAGTCTCGTTCAGAAATGTCTGGCTTCGATGACAGAGAACGGCACCGAGAGACGATGTGGGTCGGGAATCGCG
GGCGGCGCTGATTGTCAGTT

Downstream 100 bases:

>100_bases
GCTTCCACGCGCAAACGAAGAGAAACTGCGTTTGACGCAAGGATGCGGGAACAGGCCAGGACAGCGGTTGCCGGGCTGCG
GCGCTGTCCCGCGGCCTGTG

Product: exonuclease N

Products: NA

Alternate protein names: CRISPR-Associated Cas4 Family Protein

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MGVGIRSLELVITGKVDVVEFHLSADPVSGCTLPSKQGRWASYPIEYKRGWPRRGVGDDIQVCAQALCHEEMLQCAVLAG
AIY

Sequences:

>Translated_83_residues
MGVGIRSLELVITGKVDVVEFHLSADPVSGCTLPSKQGRWASYPIEYKRGWPRRGVGDDIQVCAQALCHEEMLQCAVLAG
AIY
>Mature_82_residues
GVGIRSLELVITGKVDVVEFHLSADPVSGCTLPSKQGRWASYPIEYKRGWPRRGVGDDIQVCAQALCHEEMLQCAVLAGA
IY

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9048; Mature: 8916

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVGIRSLELVITGKVDVVEFHLSADPVSGCTLPSKQGRWASYPIEYKRGWPRRGVGDDI
CCCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
QVCAQALCHEEMLQCAVLAGAIY
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GVGIRSLELVITGKVDVVEFHLSADPVSGCTLPSKQGRWASYPIEYKRGWPRRGVGDDI
CCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
QVCAQALCHEEMLQCAVLAGAIY
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA