| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is yuxL [H]
Identifier: 116622772
GI number: 116622772
Start: 4656479
End: 4657528
Strand: Direct
Name: yuxL [H]
Synonym: Acid_3671
Alternate gene names: 116622772
Gene position: 4656479-4657528 (Clockwise)
Preceding gene: 116622771
Following gene: 116622775
Centisome position: 46.73
GC content: 63.52
Gene sequence:
>1050_bases ATGCGCACTCTCTTGCTGATTGCTTTCGCCGCCGGCCTGCTTCCGGCCCAACCCGCCGCCCCCCCGGTAACCGCTCCGGC GGCAACCGCCACAGCGCCGCCCGCTCCGGCCCAGGGCCTCGCGCAGCCCAACACCGGCAACGATGAAGTCATCAAGCGCG TGGACGATCTCATGTGGCACCTCCTGCTCGACGACATTGCCCACGTCGATAAAATCGAGTACACCAGCCTGCCGCCCGCC CACGTTGGCAACCCCCGCGCTCCCGGAGCCGGCAATCCGCTGATCATCCGCGCCTACACCTTCATCCCCAAGAATCTCGA CCGCTCCAAAAGGCAGCCGCTGCTCGTCTTCTGCCACCAGGGAGTGCACGCCAATGAGGACACGCGCGACGCCCACGTCT TCCGCGAGCTCCTCGAACAGGGCTACTCCATCGTCGCCGCCGATTATCGCGGCAGCACCGGCTACGGCCGCGGCTTCTAC GAGCAGATCGATTACGGCGCCCGCGAAGTTGACGACGTCTATCTCTCCGGCCAGTGGATGCTCGACAACTACTCCTTCCT CGACCCCAAGCGCGTTGGCGTAATCGGCTGGAGCCACGGCGGCTTGATCACGCTCATGAACATCTTCACCCACCCGCAGG CCTACGCGGTCGCCTACGCCGGCGTCCCGGTCAGCGACCTGGTCGCCCGCATGGGCTACGAATCGCCCGGCTATCAGTCT CTCTATTCCGCCCCCTACCACATAGGCCGCTCTGTCCGCGAGGACGTGATGGAGTACCGCCGCCGTTCACCCGTCTATCA CGCCAAGGAATTGCAGACTCCGCTTTTGATCCACACCAACACCAACGACGAAGACGTCAACGTCCTCGAAGTGGAGCACC TGATCGAGGCGCTGAAGGCCGAAGGCAAAAAGTTCGAATACAAGATCTACGAAAATGCCCCCGGCGGTCATTACTTCAAC CGCATCGACACACGCGCCGCCAAGGACTCCCGCCGCGAGATCTACCGCTTCCTGGCGCCTTACCTCAAGCCCGACCATCC CAGGGAATGA
Upstream 100 bases:
>100_bases GGCTCCTCACCCACATCGCCGAACACACCCAACGCCACGTCGGGCAGGCCATCAGCGCGGCCAAACTCGCGCGCGTGCTG GCATAATAAGCTCTATCTGA
Downstream 100 bases:
>100_bases CCAGCGTGACGCGTGCCGGAATAGTGCCGAAGTTCTGTTAGATCGCCCCTCTCTCGACGATCGAGCGCTTACTTCACTGT GATCACACCAGAGTTACTGG
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MRTLLLIAFAAGLLPAQPAAPPVTAPAATATAPPAPAQGLAQPNTGNDEVIKRVDDLMWHLLLDDIAHVDKIEYTSLPPA HVGNPRAPGAGNPLIIRAYTFIPKNLDRSKRQPLLVFCHQGVHANEDTRDAHVFRELLEQGYSIVAADYRGSTGYGRGFY EQIDYGAREVDDVYLSGQWMLDNYSFLDPKRVGVIGWSHGGLITLMNIFTHPQAYAVAYAGVPVSDLVARMGYESPGYQS LYSAPYHIGRSVREDVMEYRRRSPVYHAKELQTPLLIHTNTNDEDVNVLEVEHLIEALKAEGKKFEYKIYENAPGGHYFN RIDTRAAKDSRREIYRFLAPYLKPDHPRE
Sequences:
>Translated_349_residues MRTLLLIAFAAGLLPAQPAAPPVTAPAATATAPPAPAQGLAQPNTGNDEVIKRVDDLMWHLLLDDIAHVDKIEYTSLPPA HVGNPRAPGAGNPLIIRAYTFIPKNLDRSKRQPLLVFCHQGVHANEDTRDAHVFRELLEQGYSIVAADYRGSTGYGRGFY EQIDYGAREVDDVYLSGQWMLDNYSFLDPKRVGVIGWSHGGLITLMNIFTHPQAYAVAYAGVPVSDLVARMGYESPGYQS LYSAPYHIGRSVREDVMEYRRRSPVYHAKELQTPLLIHTNTNDEDVNVLEVEHLIEALKAEGKKFEYKIYENAPGGHYFN RIDTRAAKDSRREIYRFLAPYLKPDHPRE >Mature_349_residues MRTLLLIAFAAGLLPAQPAAPPVTAPAATATAPPAPAQGLAQPNTGNDEVIKRVDDLMWHLLLDDIAHVDKIEYTSLPPA HVGNPRAPGAGNPLIIRAYTFIPKNLDRSKRQPLLVFCHQGVHANEDTRDAHVFRELLEQGYSIVAADYRGSTGYGRGFY EQIDYGAREVDDVYLSGQWMLDNYSFLDPKRVGVIGWSHGGLITLMNIFTHPQAYAVAYAGVPVSDLVARMGYESPGYQS LYSAPYHIGRSVREDVMEYRRRSPVYHAKELQTPLLIHTNTNDEDVNVLEVEHLIEALKAEGKKFEYKIYENAPGGHYFN RIDTRAAKDSRREIYRFLAPYLKPDHPRE
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI194394146, Length=234, Percent_Identity=29.9145299145299, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI18450280, Length=217, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI37577089, Length=217, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI23510451, Length=193, Percent_Identity=25.9067357512953, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI45551969, Length=230, Percent_Identity=29.1304347826087, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI45550825, Length=244, Percent_Identity=28.2786885245902, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI45553511, Length=244, Percent_Identity=28.2786885245902, Blast_Score=79, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 39095; Mature: 39095
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLLLIAFAAGLLPAQPAAPPVTAPAATATAPPAPAQGLAQPNTGNDEVIKRVDDLMWH CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LLLDDIAHVDKIEYTSLPPAHVGNPRAPGAGNPLIIRAYTFIPKNLDRSKRQPLLVFCHQ HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHCCCEEEEEEC GVHANEDTRDAHVFRELLEQGYSIVAADYRGSTGYGRGFYEQIDYGAREVDDVYLSGQWM CCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCHHHCEEEECCEEE LDNYSFLDPKRVGVIGWSHGGLITLMNIFTHPQAYAVAYAGVPVSDLVARMGYESPGYQS ECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCHHEEEECCCCHHHHHHHHCCCCCCHHH LYSAPYHIGRSVREDVMEYRRRSPVYHAKELQTPLLIHTNTNDEDVNVLEVEHLIEALKA HHHCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHC EGKKFEYKIYENAPGGHYFNRIDTRAAKDSRREIYRFLAPYLKPDHPRE CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRTLLLIAFAAGLLPAQPAAPPVTAPAATATAPPAPAQGLAQPNTGNDEVIKRVDDLMWH CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LLLDDIAHVDKIEYTSLPPAHVGNPRAPGAGNPLIIRAYTFIPKNLDRSKRQPLLVFCHQ HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHCCCEEEEEEC GVHANEDTRDAHVFRELLEQGYSIVAADYRGSTGYGRGFYEQIDYGAREVDDVYLSGQWM CCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCHHHCEEEECCEEE LDNYSFLDPKRVGVIGWSHGGLITLMNIFTHPQAYAVAYAGVPVSDLVARMGYESPGYQS ECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCHHEEEECCCCHHHHHHHHCCCCCCHHH LYSAPYHIGRSVREDVMEYRRRSPVYHAKELQTPLLIHTNTNDEDVNVLEVEHLIEALKA HHHCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHC EGKKFEYKIYENAPGGHYFNRIDTRAAKDSRREIYRFLAPYLKPDHPRE CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]