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The map label for this gene is yagT [H]

Identifier: 116622749

GI number: 116622749

Start: 4625066

End: 4625680

Strand: Direct

Name: yagT [H]

Synonym: Acid_3648

Alternate gene names: 116622749

Gene position: 4625066-4625680 (Clockwise)

Preceding gene: 116622748

Following gene: 116622750

Centisome position: 46.41

GC content: 64.23

Gene sequence:

>615_bases
ATGAGCATTTCAAGACGTCAGTTCGTAGTCGTGCTGGCGGGGGGTGCAGCGGCGGTGTTGCCAGCGGATCCGCAGACCGG
CGGCCTGCCGGCGGGAACCGTACCATGCCGCATCAGGGTCAACGGACAGGCGCACGACCTCGTATTGGATCCGCGAGTCA
CGCTCCTCGATCTGCTTCGCGAACACCTGCAGCTCACCGGCACCAAAATGGGCTGCGATCACGGACAGTGCGGCGCCTGC
ACCGTGCTCATTCGCGGACGCCGTGTGAACTCATGTTTGAGTCTCGCAGTCAGCCACGACGGCGACGAGATCACCACCAT
CGAAGGGCTCGCCCGTGGCGACGAGTTGCATCCAATGCAGGCCGCTTTTCTGGAGAACGATGGTTTTCAGTGCGGATACT
GCACCCCGGGACAAATCTGCTCCGCGGTCGCTCTGTTGGAGGAAGCGCGCCGCGGGATGCCGAGCGCTGTCACTCCGGAC
ATCCGCAAAAGCGGTCCGGTCGCGCTCACCGACGATGAGATCCGCGAGCGCATGAGCGGAAATCTCTGCCGCTGCGGCGC
GTATGTCGGGATCGTCGCCGCGGTACGCGCGGCTCGCGGGAAGGGAATGGCATGA

Upstream 100 bases:

>100_bases
CGCATGTTCTCCGCATAACAGACGCATCCGCAACCGGCGCGCGAAATGGGATCAAGCGCGCAGTCTCGACCTGTCTTCCT
CATCTACAATTTCCGGAAGG

Downstream 100 bases:

>100_bases
AACCCTTCACGTACACTCGTGCGAAAGCCGTGCCGGAAGCGATCGCCGCGATCGCGGAGCCGCACTCTAAATTCCTGGGC
GGCGGAACCAACCTCATCGA

Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSISRRQFVVVLAGGAAAVLPADPQTGGLPAGTVPCRIRVNGQAHDLVLDPRVTLLDLLREHLQLTGTKMGCDHGQCGAC
TVLIRGRRVNSCLSLAVSHDGDEITTIEGLARGDELHPMQAAFLENDGFQCGYCTPGQICSAVALLEEARRGMPSAVTPD
IRKSGPVALTDDEIRERMSGNLCRCGAYVGIVAAVRAARGKGMA

Sequences:

>Translated_204_residues
MSISRRQFVVVLAGGAAAVLPADPQTGGLPAGTVPCRIRVNGQAHDLVLDPRVTLLDLLREHLQLTGTKMGCDHGQCGAC
TVLIRGRRVNSCLSLAVSHDGDEITTIEGLARGDELHPMQAAFLENDGFQCGYCTPGQICSAVALLEEARRGMPSAVTPD
IRKSGPVALTDDEIRERMSGNLCRCGAYVGIVAAVRAARGKGMA
>Mature_203_residues
SISRRQFVVVLAGGAAAVLPADPQTGGLPAGTVPCRIRVNGQAHDLVLDPRVTLLDLLREHLQLTGTKMGCDHGQCGACT
VLIRGRRVNSCLSLAVSHDGDEITTIEGLARGDELHPMQAAFLENDGFQCGYCTPGQICSAVALLEEARRGMPSAVTPDI
RKSGPVALTDDEIRERMSGNLCRCGAYVGIVAAVRAARGKGMA

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=158, Percent_Identity=36.7088607594937, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI71773480, Length=159, Percent_Identity=37.1069182389937, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1786480, Length=208, Percent_Identity=56.7307692307692, Blast_Score=225, Evalue=2e-60,
Organism=Escherichia coli, GI1789232, Length=163, Percent_Identity=39.8773006134969, Blast_Score=107, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17540638, Length=166, Percent_Identity=36.7469879518072, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17539860, Length=157, Percent_Identity=33.7579617834395, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI32566215, Length=167, Percent_Identity=32.9341317365269, Blast_Score=90, Evalue=7e-19,
Organism=Drosophila melanogaster, GI17737937, Length=169, Percent_Identity=37.8698224852071, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24647197, Length=177, Percent_Identity=35.5932203389831, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24647195, Length=177, Percent_Identity=35.5932203389831, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24647199, Length=154, Percent_Identity=35.7142857142857, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24647201, Length=168, Percent_Identity=33.9285714285714, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24647193, Length=175, Percent_Identity=32.5714285714286, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 21462; Mature: 21331

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISRRQFVVVLAGGAAAVLPADPQTGGLPAGTVPCRIRVNGQAHDLVLDPRVTLLDLLR
CCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHH
EHLQLTGTKMGCDHGQCGACTVLIRGRRVNSCLSLAVSHDGDEITTIEGLARGDELHPMQ
HHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHEEECCCCCCEEEEHHHHCCCCCCHHH
AAFLENDGFQCGYCTPGQICSAVALLEEARRGMPSAVTPDIRKSGPVALTDDEIRERMSG
HHHCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHCC
NLCRCGAYVGIVAAVRAARGKGMA
CEEEHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SISRRQFVVVLAGGAAAVLPADPQTGGLPAGTVPCRIRVNGQAHDLVLDPRVTLLDLLR
CCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHH
EHLQLTGTKMGCDHGQCGACTVLIRGRRVNSCLSLAVSHDGDEITTIEGLARGDELHPMQ
HHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHEEECCCCCCEEEEHHHHCCCCCCHHH
AAFLENDGFQCGYCTPGQICSAVALLEEARRGMPSAVTPDIRKSGPVALTDDEIRERMSG
HHHCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHCC
NLCRCGAYVGIVAAVRAARGKGMA
CEEEHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]