| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116622748
Identifier: 116622748
GI number: 116622748
Start: 4624553
End: 4624960
Strand: Direct
Name: 116622748
Synonym: Acid_3647
Alternate gene names: NA
Gene position: 4624553-4624960 (Clockwise)
Preceding gene: 116622747
Following gene: 116622749
Centisome position: 46.4
GC content: 61.52
Gene sequence:
>408_bases ATGCTTCCAAACGCGTTCATCGGGCGGACCAAGGCGCCAACCGATGAGGAACTTTCCATGGAGCTCGGCGATGCCCGGGC CTTGTGGGACCAGTTGCTGAAGGAACTGGCCTTGCCGGTGCAGGAGTGGCACTCCTATTCTGTGAAGGCCGGATGGTCGC TCCGGCTCAAGGTGGGCAAACGTACGATCGTTTACGTCATACCCTGCCGCGGCGCGCTGCGCGTCTCCTTCGCTCTCGGC GAAAAGGCGATGCAGGCGGCGCGTGAATCCAAACTCCCGGCGAGCGTCATCAAAATCCTGGAGGAAGCGCCTCGCTACGC CGAAGGCGCGGGAGTGCGGCTCGACGTCACGAAGAAGAGCGATCTGTCCACCGTGAAAAAACTCGCGGCCGCAAAGATGG CAAACTAG
Upstream 100 bases:
>100_bases CCGAGTGGCGCCACCCCAAAGAAGGCAAACTCACGCTAGGCTTCACCCTCCCGCACCATGCCGTGTCGCTCGTTCGCGTA ACTTGGTAGGCTCGGACCGT
Downstream 100 bases:
>100_bases CCAGGCGCATGTTCTCCGCATAACAGACGCATCCGCAACCGGCGCGCGAAATGGGATCAAGCGCGCAGTCTCGACCTGTC TTCCTCATCTACAATTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MLPNAFIGRTKAPTDEELSMELGDARALWDQLLKELALPVQEWHSYSVKAGWSLRLKVGKRTIVYVIPCRGALRVSFALG EKAMQAARESKLPASVIKILEEAPRYAEGAGVRLDVTKKSDLSTVKKLAAAKMAN
Sequences:
>Translated_135_residues MLPNAFIGRTKAPTDEELSMELGDARALWDQLLKELALPVQEWHSYSVKAGWSLRLKVGKRTIVYVIPCRGALRVSFALG EKAMQAARESKLPASVIKILEEAPRYAEGAGVRLDVTKKSDLSTVKKLAAAKMAN >Mature_135_residues MLPNAFIGRTKAPTDEELSMELGDARALWDQLLKELALPVQEWHSYSVKAGWSLRLKVGKRTIVYVIPCRGALRVSFALG EKAMQAARESKLPASVIKILEEAPRYAEGAGVRLDVTKKSDLSTVKKLAAAKMAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14837; Mature: 14837
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPNAFIGRTKAPTDEELSMELGDARALWDQLLKELALPVQEWHSYSVKAGWSLRLKVGK CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEECC RTIVYVIPCRGALRVSFALGEKAMQAARESKLPASVIKILEEAPRYAEGAGVRLDVTKKS EEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECCCC DLSTVKKLAAAKMAN HHHHHHHHHHHHCCC >Mature Secondary Structure MLPNAFIGRTKAPTDEELSMELGDARALWDQLLKELALPVQEWHSYSVKAGWSLRLKVGK CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEECC RTIVYVIPCRGALRVSFALGEKAMQAARESKLPASVIKILEEAPRYAEGAGVRLDVTKKS EEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECCCC DLSTVKKLAAAKMAN HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA