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The map label for this gene is 116622744

Identifier: 116622744

GI number: 116622744

Start: 4618554

End: 4620362

Strand: Direct

Name: 116622744

Synonym: Acid_3643

Alternate gene names: NA

Gene position: 4618554-4620362 (Clockwise)

Preceding gene: 116622743

Following gene: 116622747

Centisome position: 46.34

GC content: 65.06

Gene sequence:

>1809_bases
ATGACACTGGCGGCGGCCCCGAGAGCGGAAAAAGCGCCGAGTCAGCGAGTTTCGCCGCTCGGTCTGGCGCTCGGGATGAT
TGCGGGACTGGCGGCCTTCAGCCTGATCCCCTGGGTGCTTGAGAATCCGCGGCTGGCGGGATCGGTCTGGGCCGCGTGCG
GCGCGCTGCTTTCCGTCGCGCTGGCGGTGTACGTTCGGGCGTCACGTGCCGGCCGGGTGCTGCGCATCGAAGTATCGCCC
AGGAAGGTCCATTATGTGCAGCTGGCGATGCACACCAGCATCTACATCTATTGGGGCTGGTACTGGCGCGAGGTCTATCA
CTACGCTCCGCTGATTGCCGCGCAGATCGTCTTCTTTTACGCGCTGGACATGCTGGTGTGCTGGTGGCGGCGCGATACCT
TCATTCTCGGCTTCGGACCCTTCCCGATCGTCCTCAGCACCAACCTGTTCCTCTGGTTCCACGACGACTGGTTCTACCTG
CAGTTCCTCATGATCGCCACTGCCGTGCTCTTCAAGGAGTTCGTGAAGTGGGAGCGCGACGGGCGGCGCACCCATATCTT
CAATCCCTCGGCGATAGCCCTCGCGATCTTCTCGGTCGTGCTTCTGGCCACTGGCGGCACGCACATCTCGTGGGCGGAAG
AGGTGTCGATCAGCCTCGGCCGTCCGTCATACATGTACCTGTGGATCTTCGCGACCGGGATCGTCGTGCAGTCGCTTTTC
CGCGTGACGCTCGTGACACTCTCCGCGGCGGCGGCGCTGGTCGCGCTGAACCTGGCGTATACGGCGATAACGGGCGTGTA
CTACTTCGTAGACGCGACCATTCCGATCGCGGTCTTCCTTGGACTGCACCTGCTGGTTACGGATCCGGCGACATCGCCGC
GCAGAAACATCGGCAAGGCGATTTTCGGCGCGATGTACGGGGCGGCTGTCTTTCTCTTGTACGCCGTGCTCGGCTGGCTC
GGGATGCCGACGTTCTACGACAAGCTGCTGTGCGTACCGCCGATGAATCTGACGGCGCGCTGGCTGGACCGTGTGAGCCT
GCGCATCGAAAAGCGGTTCGGCCCCGTGCTCGATGGGTGGAGTCCGGGGCGTTTGAATCTGGCGCATATGGCCGTGTGGA
TCGCGCTCTTCGCCGGAATTCTATCTGCCGGGCTGGTAGGCAGCAATCATCCGGGTACGCACTCCGAATTCTGGCGGCGA
GCCTGTGAGGAGGGACGCCGCGGCGCGTGCGCCACGTGGGTCCGCGCAACTAACGTGGCCTGCTCGCACGGGTCGGGTAC
GGCGTGTTATCAACTCGGACTGGCTCTGGATGCGGGGTTCGTAATCCCGAGGCATGCCGGCGACGCAGGGAAGAATTTCG
CGCGCGCCTGCGATTTGAAGACACCCGGGTCCTGCCCCAGTCTGGTGACGCTTGCGAAGAAGGATGGCGACGGTGTGTTT
CTCCGGCCCTGCAATGCGGGCGATGGCGAGAGTTGCTTCGTGCTGGCATCGCTCCGCTATGCGGCGCGCGACTACGAGCG
CAGCGCCGTGCTCTTCCGGCAAGCGTGCGACGCAGGTTGGGAACGCGGCTGCGGCGGCCTCGCGGAGTTGTACCGGGCGG
GCCTTGGTGTACCGGCCGATCCTGCGCGGGCCGCGTCGTACTTCGAACGCGCCTGCCACGCGGGAATTGCGGCGAGCTGC
AACGCGCTCGGCCGTCAGCGCCAGGCCTGCGAACTCAGCCTGCGCGCGGCAACGGACAACTCGGCCTACTTCCACGCAGG
CGCGCCGCAGCCCGACGCCGCGTTCTGCGTCAGCGAACCGCGACCGTGA

Upstream 100 bases:

>100_bases
GGGACCTGAGCAGCGGGGCGCAAACCAACGCGCTCTTCGGACAGGTGAGTTCCACGCGCGCTCCGCGCATTATGCAGGGC
TCGCTGCGCTTTACCTTCTG

Downstream 100 bases:

>100_bases
GGGAGCGATCTTTTGATTACTCCAACTTCAATTTCAATATCGTCAACGAATGCGCCGGGAAGGTATAAGTCAACCCATTG
CGCTCGACTTGAGCCGTGAG

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: Cysteine-Rich Protein H; Sel1 Domain-Containing Protein

Number of amino acids: Translated: 602; Mature: 601

Protein sequence:

>602_residues
MTLAAAPRAEKAPSQRVSPLGLALGMIAGLAAFSLIPWVLENPRLAGSVWAACGALLSVALAVYVRASRAGRVLRIEVSP
RKVHYVQLAMHTSIYIYWGWYWREVYHYAPLIAAQIVFFYALDMLVCWWRRDTFILGFGPFPIVLSTNLFLWFHDDWFYL
QFLMIATAVLFKEFVKWERDGRRTHIFNPSAIALAIFSVVLLATGGTHISWAEEVSISLGRPSYMYLWIFATGIVVQSLF
RVTLVTLSAAAALVALNLAYTAITGVYYFVDATIPIAVFLGLHLLVTDPATSPRRNIGKAIFGAMYGAAVFLLYAVLGWL
GMPTFYDKLLCVPPMNLTARWLDRVSLRIEKRFGPVLDGWSPGRLNLAHMAVWIALFAGILSAGLVGSNHPGTHSEFWRR
ACEEGRRGACATWVRATNVACSHGSGTACYQLGLALDAGFVIPRHAGDAGKNFARACDLKTPGSCPSLVTLAKKDGDGVF
LRPCNAGDGESCFVLASLRYAARDYERSAVLFRQACDAGWERGCGGLAELYRAGLGVPADPARAASYFERACHAGIAASC
NALGRQRQACELSLRAATDNSAYFHAGAPQPDAAFCVSEPRP

Sequences:

>Translated_602_residues
MTLAAAPRAEKAPSQRVSPLGLALGMIAGLAAFSLIPWVLENPRLAGSVWAACGALLSVALAVYVRASRAGRVLRIEVSP
RKVHYVQLAMHTSIYIYWGWYWREVYHYAPLIAAQIVFFYALDMLVCWWRRDTFILGFGPFPIVLSTNLFLWFHDDWFYL
QFLMIATAVLFKEFVKWERDGRRTHIFNPSAIALAIFSVVLLATGGTHISWAEEVSISLGRPSYMYLWIFATGIVVQSLF
RVTLVTLSAAAALVALNLAYTAITGVYYFVDATIPIAVFLGLHLLVTDPATSPRRNIGKAIFGAMYGAAVFLLYAVLGWL
GMPTFYDKLLCVPPMNLTARWLDRVSLRIEKRFGPVLDGWSPGRLNLAHMAVWIALFAGILSAGLVGSNHPGTHSEFWRR
ACEEGRRGACATWVRATNVACSHGSGTACYQLGLALDAGFVIPRHAGDAGKNFARACDLKTPGSCPSLVTLAKKDGDGVF
LRPCNAGDGESCFVLASLRYAARDYERSAVLFRQACDAGWERGCGGLAELYRAGLGVPADPARAASYFERACHAGIAASC
NALGRQRQACELSLRAATDNSAYFHAGAPQPDAAFCVSEPRP
>Mature_601_residues
TLAAAPRAEKAPSQRVSPLGLALGMIAGLAAFSLIPWVLENPRLAGSVWAACGALLSVALAVYVRASRAGRVLRIEVSPR
KVHYVQLAMHTSIYIYWGWYWREVYHYAPLIAAQIVFFYALDMLVCWWRRDTFILGFGPFPIVLSTNLFLWFHDDWFYLQ
FLMIATAVLFKEFVKWERDGRRTHIFNPSAIALAIFSVVLLATGGTHISWAEEVSISLGRPSYMYLWIFATGIVVQSLFR
VTLVTLSAAAALVALNLAYTAITGVYYFVDATIPIAVFLGLHLLVTDPATSPRRNIGKAIFGAMYGAAVFLLYAVLGWLG
MPTFYDKLLCVPPMNLTARWLDRVSLRIEKRFGPVLDGWSPGRLNLAHMAVWIALFAGILSAGLVGSNHPGTHSEFWRRA
CEEGRRGACATWVRATNVACSHGSGTACYQLGLALDAGFVIPRHAGDAGKNFARACDLKTPGSCPSLVTLAKKDGDGVFL
RPCNAGDGESCFVLASLRYAARDYERSAVLFRQACDAGWERGCGGLAELYRAGLGVPADPARAASYFERACHAGIAASCN
ALGRQRQACELSLRAATDNSAYFHAGAPQPDAAFCVSEPRP

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65729; Mature: 65598

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAAAPRAEKAPSQRVSPLGLALGMIAGLAAFSLIPWVLENPRLAGSVWAACGALLSVA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LAVYVRASRAGRVLRIEVSPRKVHYVQLAMHTSIYIYWGWYWREVYHYAPLIAAQIVFFY
HHHHHHHCCCCCEEEEEECCCEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
ALDMLVCWWRRDTFILGFGPFPIVLSTNLFLWFHDDWFYLQFLMIATAVLFKEFVKWERD
HHHHHHHHHCCCEEEEEECCCCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
GRRTHIFNPSAIALAIFSVVLLATGGTHISWAEEVSISLGRPSYMYLWIFATGIVVQSLF
CCEEEEECCHHHHHHHHHHHHHHCCCCCEEEHHHHEEECCCCCEEEHHHHHHHHHHHHHH
RVTLVTLSAAAALVALNLAYTAITGVYYFVDATIPIAVFLGLHLLVTDPATSPRRNIGKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
IFGAMYGAAVFLLYAVLGWLGMPTFYDKLLCVPPMNLTARWLDRVSLRIEKRFGPVLDGW
HHHHHHHHHHHHHHHHHHHCCCCHHHHCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCC
SPGRLNLAHMAVWIALFAGILSAGLVGSNHPGTHSEFWRRACEEGRRGACATWVRATNVA
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCE
CSHGSGTACYQLGLALDAGFVIPRHAGDAGKNFARACDLKTPGSCPSLVTLAKKDGDGVF
EECCCCCHHHEEHHHHCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCEEE
LRPCNAGDGESCFVLASLRYAARDYERSAVLFRQACDAGWERGCGGLAELYRAGLGVPAD
EEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
PARAASYFERACHAGIAASCNALGRQRQACELSLRAATDNSAYFHAGAPQPDAAFCVSEP
HHHHHHHHHHHHHCCHHHHHHHHHCCCHHHEEEEEEECCCCCEEECCCCCCCCEEECCCC
RP
CC
>Mature Secondary Structure 
TLAAAPRAEKAPSQRVSPLGLALGMIAGLAAFSLIPWVLENPRLAGSVWAACGALLSVA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LAVYVRASRAGRVLRIEVSPRKVHYVQLAMHTSIYIYWGWYWREVYHYAPLIAAQIVFFY
HHHHHHHCCCCCEEEEEECCCEEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
ALDMLVCWWRRDTFILGFGPFPIVLSTNLFLWFHDDWFYLQFLMIATAVLFKEFVKWERD
HHHHHHHHHCCCEEEEEECCCCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
GRRTHIFNPSAIALAIFSVVLLATGGTHISWAEEVSISLGRPSYMYLWIFATGIVVQSLF
CCEEEEECCHHHHHHHHHHHHHHCCCCCEEEHHHHEEECCCCCEEEHHHHHHHHHHHHHH
RVTLVTLSAAAALVALNLAYTAITGVYYFVDATIPIAVFLGLHLLVTDPATSPRRNIGKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
IFGAMYGAAVFLLYAVLGWLGMPTFYDKLLCVPPMNLTARWLDRVSLRIEKRFGPVLDGW
HHHHHHHHHHHHHHHHHHHCCCCHHHHCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCC
SPGRLNLAHMAVWIALFAGILSAGLVGSNHPGTHSEFWRRACEEGRRGACATWVRATNVA
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCE
CSHGSGTACYQLGLALDAGFVIPRHAGDAGKNFARACDLKTPGSCPSLVTLAKKDGDGVF
EECCCCCHHHEEHHHHCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCEEE
LRPCNAGDGESCFVLASLRYAARDYERSAVLFRQACDAGWERGCGGLAELYRAGLGVPAD
EEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
PARAASYFERACHAGIAASCNALGRQRQACELSLRAATDNSAYFHAGAPQPDAAFCVSEP
HHHHHHHHHHHHHCCHHHHHHHHHCCCHHHEEEEEEECCCCCEEECCCCCCCCEEECCCC
RP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA