| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622693
Identifier: 116622693
GI number: 116622693
Start: 4549946
End: 4550515
Strand: Direct
Name: 116622693
Synonym: Acid_3592
Alternate gene names: NA
Gene position: 4549946-4550515 (Clockwise)
Preceding gene: 116622692
Following gene: 116622694
Centisome position: 45.66
GC content: 63.86
Gene sequence:
>570_bases TTGGAACGCCAGCTCTCCGGGTTGCGGCCCGGGGAACAGGCTTGCATAATTAAAACTATGAAAATGGATGAGTTGCGAGC CGTACAGGCACCACTTAAGGAGAAGTACCGGGCGGAGCCGGGGACGGCGATGATCACGCTGTGGGCGGACGGGCGAATTG GGGAGCAGGTGTCGTGCAGTGTGCAGACCGGGAGGGCGCTGGTAGAAGCGGGACTGCATCCGGCGACCGGGGGCGGCGGG ACGCTGGCGTGTTCCGGGGATATGTTGCTGGAGGCGCTGGCGGCGTGCGCGGGAGTGACGATGGCAGCGGTGGCGAAATC AACTGGAATTGTACTGCGCGGCGGCACGGTGCGGGCGGAGGGCGACCTGGATTTTCGAGGCACGCTGGGAGTCTCGAAGG ATGTACCGGTCGGGTTCCAGAAGATCCGGCTGGAGTTCGATGTAGATACCGACGCATCGGAGGAGCAGATTGCGACGCTG CGGCGGCTCACCGAGAGGTATTGCGTGGTTTACCAGACGCTGCGACAGGGGGCCGCGATGTCGGTCACGGTGAACGGGTG GGGAGAGTAG
Upstream 100 bases:
>100_bases TCCCGCCAAATGGGGTGGCCGTGCGACGTATGTGGGCCGAAGTTGCATCCTCTCAGTGAGTTAACACGGGAAAAATAAAT TTGATGTTGCGGTGAACGGG
Downstream 100 bases:
>100_bases CTACCGCCGGGGCGCGCAAAGAACGTAAAGAGAACTTACTAAACAGAGCGAAGGCGATGGATCATACTTTGTGACCGTAA AAGGAGTATGCTTCAGTAAC
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC-Like Protein; Osmc Family Protein
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MERQLSGLRPGEQACIIKTMKMDELRAVQAPLKEKYRAEPGTAMITLWADGRIGEQVSCSVQTGRALVEAGLHPATGGGG TLACSGDMLLEALAACAGVTMAAVAKSTGIVLRGGTVRAEGDLDFRGTLGVSKDVPVGFQKIRLEFDVDTDASEEQIATL RRLTERYCVVYQTLRQGAAMSVTVNGWGE
Sequences:
>Translated_189_residues MERQLSGLRPGEQACIIKTMKMDELRAVQAPLKEKYRAEPGTAMITLWADGRIGEQVSCSVQTGRALVEAGLHPATGGGG TLACSGDMLLEALAACAGVTMAAVAKSTGIVLRGGTVRAEGDLDFRGTLGVSKDVPVGFQKIRLEFDVDTDASEEQIATL RRLTERYCVVYQTLRQGAAMSVTVNGWGE >Mature_189_residues MERQLSGLRPGEQACIIKTMKMDELRAVQAPLKEKYRAEPGTAMITLWADGRIGEQVSCSVQTGRALVEAGLHPATGGGG TLACSGDMLLEALAACAGVTMAAVAKSTGIVLRGGTVRAEGDLDFRGTLGVSKDVPVGFQKIRLEFDVDTDASEEQIATL RRLTERYCVVYQTLRQGAAMSVTVNGWGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20077; Mature: 20077
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERQLSGLRPGEQACIIKTMKMDELRAVQAPLKEKYRAEPGTAMITLWADGRIGEQVSCS CCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEE VQTGRALVEAGLHPATGGGGTLACSGDMLLEALAACAGVTMAAVAKSTGIVLRGGTVRAE HHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHCHHHHHHHHCCCEEEECCEEEEC GDLDFRGTLGVSKDVPVGFQKIRLEFDVDTDASEEQIATLRRLTERYCVVYQTLRQGAAM CCCCEEECCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE SVTVNGWGE EEEECCCCC >Mature Secondary Structure MERQLSGLRPGEQACIIKTMKMDELRAVQAPLKEKYRAEPGTAMITLWADGRIGEQVSCS CCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEE VQTGRALVEAGLHPATGGGGTLACSGDMLLEALAACAGVTMAAVAKSTGIVLRGGTVRAE HHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHCHHHHHHHHCCCEEEECCEEEEC GDLDFRGTLGVSKDVPVGFQKIRLEFDVDTDASEEQIATLRRLTERYCVVYQTLRQGAAM CCCCEEECCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE SVTVNGWGE EEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA