| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622682
Identifier: 116622682
GI number: 116622682
Start: 4531476
End: 4533200
Strand: Direct
Name: 116622682
Synonym: Acid_3581
Alternate gene names: NA
Gene position: 4531476-4533200 (Clockwise)
Preceding gene: 116622681
Following gene: 116622683
Centisome position: 45.47
GC content: 63.77
Gene sequence:
>1725_bases GTGGGTCTAAATCAACGTTGTTCCCTGGCGTTCACCGCCGCAGTCCTTCTTTCCACAGGTGTTCTGAGCGCGGCTCCCCG TCTCCGCCTGGTTTCCAGTACCGTCGGACCGGTTTCCATTGCGCAGGGCGCCAACGGCGCGCCGCAGACGGTGGAAATCT ATAATGCCGGCGATGGCTCCCTTTCTCCCAAGATCTCCTCCTCCGTTCCCTGGATCGGGACCTCGGCCGGCACGCAAACC AACTGCGTAGGACGTGTGGGCGTTTGTATTCCACTCCAGATTTCGTTGAATACCTCGAGTCTTCCAGCGGGGATCACCAC CGGCATTGTCACGGTCGCCGATAACGACGCCAGTGTCGTCGATGCACCGCAGACGATCACGGTGACGGTCGCGATCGGCG GCGCCGTACCCTCCAGCGTGGACGTCTACGCTGCCCCCGGCAGCGCGCGTGACATTGAATTTTCCACCAACAGCCAGCTC GTCGGCATCGCCAAGACGAACGATGGCGCCTCGTGGCTCTCGCTCTCCGTCGATGGCACCGGAACCTTCCGCTTTCTGTT TCCCTATCGGATTCACGTCGCACCGCCGGCCACCATGGCGTCCGGGACCTATTCCGGCACCGTGACGAGCTCCGGCTCGA ATTTCGCGCCCGACAACAAGTCGATCCCGGTTACCATGCGGGTTACCACGCAGCCGATCGCGCAGGCCTCTTCTTCGCAC GTTCAGGTGCGCCTCGCGCAGGGAGCCCCGCCCCTGACCACTGCCGTTTCGCTGAGCAACCTGGGGCAGGGAACCCTGGC CCTGCAGGGAGCGCTGGTAAACGGCGCCGCGTGGCTCACCGCCACCACTGCCGGGAATGCCGCGGTGCTGACTTTCGATG CCGGCTCCATGTCTCCCGGAACCTATAGCGGCACGGTCACGCTCACCTCGAATGCCGCGAACATCATCGCCCCCATCCCG GTGGATTTCACCGTGGTGGCCAAAGGCGCGCCCGTGATTAATTATCAGGGCGTGGTGGATAACGGGACCTTCGCTGCCGG AGACACCGTGGCCCGCGGCGATGTCATGGTGGTGCTCGGCGACCAGTTATCGTTCGCTCCTCTTACCGTTGGCAAAGCGC CTCCGCTCGACACGCAGGTGGGCGGCGCCAGCGTCACGGTGAACGGCCGTCAGGCCCCCATGTATTATTCCTCGTACGGC CAGCTGGCCTTCCAGCTGCCCTATGAGATCAGCAACGGGACGGCTGTGGTCCAGGTGCAGCGCGATGGGCTTAGCAGCAA CCCGGTATCCGTGCAGGTGGCCGACCGCGCACCGCGGCTGCTATTGATAGGCGTCGGCACCTATGGCGCCATCCAGAATC AGGACCTGAGCATTCCCATGCCGGTAGGCTCGTTCCCCGGGGTCAATACGCATCCCGCTAAAGCAGGCGACGCACTGACC ATTTACGCGATCGGGCTCGGCCCCACGAATCCCGGGGTCGTCAGCGGTCAGCCGGCTCCGGCCACTTCGCCGTTCGCTCC ACTGACCGCCACCGCGACGATCAATTTCGGCGCAGGCCCCGGCGGTATGGTCGTGGTGCCGCTCTACGCCGGATTGACCC CGACCTTCGCCGGTCTCTATCAGATCAACGTGGTAGTCCCGCCAGGTCTGCCGAAGGGCGCCATCGATCTGACCGTCAAT TTCAGCGACTCGTCCAGCAACGCCGTGCAGATCTACGTCCAATAA
Upstream 100 bases:
>100_bases GCTATCGTCAGATGCAATGGTTCGGCGTGGCCGAAGTTGCCGTGTTTCTGGTGATCCTCGCGGTCGGTTATATCTGGGCG TATAAGAAGGGTGCTCTCGA
Downstream 100 bases:
>100_bases GTTCGCCGTCCATGCGAACCGCGACCGTGAGGGAGCGATCTCGTTAGGGATCTGACAACGCACGTACAATAGAGGTTTGG CCTCAGTGAAACCTAATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 574; Mature: 573
Protein sequence:
>574_residues MGLNQRCSLAFTAAVLLSTGVLSAAPRLRLVSSTVGPVSIAQGANGAPQTVEIYNAGDGSLSPKISSSVPWIGTSAGTQT NCVGRVGVCIPLQISLNTSSLPAGITTGIVTVADNDASVVDAPQTITVTVAIGGAVPSSVDVYAAPGSARDIEFSTNSQL VGIAKTNDGASWLSLSVDGTGTFRFLFPYRIHVAPPATMASGTYSGTVTSSGSNFAPDNKSIPVTMRVTTQPIAQASSSH VQVRLAQGAPPLTTAVSLSNLGQGTLALQGALVNGAAWLTATTAGNAAVLTFDAGSMSPGTYSGTVTLTSNAANIIAPIP VDFTVVAKGAPVINYQGVVDNGTFAAGDTVARGDVMVVLGDQLSFAPLTVGKAPPLDTQVGGASVTVNGRQAPMYYSSYG QLAFQLPYEISNGTAVVQVQRDGLSSNPVSVQVADRAPRLLLIGVGTYGAIQNQDLSIPMPVGSFPGVNTHPAKAGDALT IYAIGLGPTNPGVVSGQPAPATSPFAPLTATATINFGAGPGGMVVVPLYAGLTPTFAGLYQINVVVPPGLPKGAIDLTVN FSDSSSNAVQIYVQ
Sequences:
>Translated_574_residues MGLNQRCSLAFTAAVLLSTGVLSAAPRLRLVSSTVGPVSIAQGANGAPQTVEIYNAGDGSLSPKISSSVPWIGTSAGTQT NCVGRVGVCIPLQISLNTSSLPAGITTGIVTVADNDASVVDAPQTITVTVAIGGAVPSSVDVYAAPGSARDIEFSTNSQL VGIAKTNDGASWLSLSVDGTGTFRFLFPYRIHVAPPATMASGTYSGTVTSSGSNFAPDNKSIPVTMRVTTQPIAQASSSH VQVRLAQGAPPLTTAVSLSNLGQGTLALQGALVNGAAWLTATTAGNAAVLTFDAGSMSPGTYSGTVTLTSNAANIIAPIP VDFTVVAKGAPVINYQGVVDNGTFAAGDTVARGDVMVVLGDQLSFAPLTVGKAPPLDTQVGGASVTVNGRQAPMYYSSYG QLAFQLPYEISNGTAVVQVQRDGLSSNPVSVQVADRAPRLLLIGVGTYGAIQNQDLSIPMPVGSFPGVNTHPAKAGDALT IYAIGLGPTNPGVVSGQPAPATSPFAPLTATATINFGAGPGGMVVVPLYAGLTPTFAGLYQINVVVPPGLPKGAIDLTVN FSDSSSNAVQIYVQ >Mature_573_residues GLNQRCSLAFTAAVLLSTGVLSAAPRLRLVSSTVGPVSIAQGANGAPQTVEIYNAGDGSLSPKISSSVPWIGTSAGTQTN CVGRVGVCIPLQISLNTSSLPAGITTGIVTVADNDASVVDAPQTITVTVAIGGAVPSSVDVYAAPGSARDIEFSTNSQLV GIAKTNDGASWLSLSVDGTGTFRFLFPYRIHVAPPATMASGTYSGTVTSSGSNFAPDNKSIPVTMRVTTQPIAQASSSHV QVRLAQGAPPLTTAVSLSNLGQGTLALQGALVNGAAWLTATTAGNAAVLTFDAGSMSPGTYSGTVTLTSNAANIIAPIPV DFTVVAKGAPVINYQGVVDNGTFAAGDTVARGDVMVVLGDQLSFAPLTVGKAPPLDTQVGGASVTVNGRQAPMYYSSYGQ LAFQLPYEISNGTAVVQVQRDGLSSNPVSVQVADRAPRLLLIGVGTYGAIQNQDLSIPMPVGSFPGVNTHPAKAGDALTI YAIGLGPTNPGVVSGQPAPATSPFAPLTATATINFGAGPGGMVVVPLYAGLTPTFAGLYQINVVVPPGLPKGAIDLTVNF SDSSSNAVQIYVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57715; Mature: 57584
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLNQRCSLAFTAAVLLSTGVLSAAPRLRLVSSTVGPVSIAQGANGAPQTVEIYNAGDGS CCCCCCCCHHHHHHHHHHCCHHHCCCCEEEEECCCCCEEEECCCCCCCCEEEEEECCCCC LSPKISSSVPWIGTSAGTQTNCVGRVGVCIPLQISLNTSSLPAGITTGIVTVADNDASVV CCCCCCCCCCEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCEEE DAPQTITVTVAIGGAVPSSVDVYAAPGSARDIEFSTNSQLVGIAKTNDGASWLSLSVDGT ECCCEEEEEEEECCCCCCCEEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEEECCC GTFRFLFPYRIHVAPPATMASGTYSGTVTSSGSNFAPDNKSIPVTMRVTTQPIAQASSSH EEEEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCHHHCCCCCE VQVRLAQGAPPLTTAVSLSNLGQGTLALQGALVNGAAWLTATTAGNAAVLTFDAGSMSPG EEEEEECCCCCCEEEEEHHCCCCCEEEEEEEEECCEEEEEEECCCCEEEEEEECCCCCCC TYSGTVTLTSNAANIIAPIPVDFTVVAKGAPVINYQGVVDNGTFAAGDTVARGDVMVVLG CEEEEEEEECCCCEEEEECCCCEEEEECCCCEEEEEEEECCCCEECCCEEECCCEEEEEC DQLSFAPLTVGKAPPLDTQVGGASVTVNGRQAPMYYSSYGQLAFQLPYEISNGTAVVQVQ CCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEECEEECCCEEEEEEE RDGLSSNPVSVQVADRAPRLLLIGVGTYGAIQNQDLSIPMPVGSFPGVNTHPAKAGDALT ECCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEE IYAIGLGPTNPGVVSGQPAPATSPFAPLTATATINFGAGPGGMVVVPLYAGLTPTFAGLY EEEEEECCCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCEEEEE QINVVVPPGLPKGAIDLTVNFSDSSSNAVQIYVQ EEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEC >Mature Secondary Structure GLNQRCSLAFTAAVLLSTGVLSAAPRLRLVSSTVGPVSIAQGANGAPQTVEIYNAGDGS CCCCCCCHHHHHHHHHHCCHHHCCCCEEEEECCCCCEEEECCCCCCCCEEEEEECCCCC LSPKISSSVPWIGTSAGTQTNCVGRVGVCIPLQISLNTSSLPAGITTGIVTVADNDASVV CCCCCCCCCCEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCEEE DAPQTITVTVAIGGAVPSSVDVYAAPGSARDIEFSTNSQLVGIAKTNDGASWLSLSVDGT ECCCEEEEEEEECCCCCCCEEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEEECCC GTFRFLFPYRIHVAPPATMASGTYSGTVTSSGSNFAPDNKSIPVTMRVTTQPIAQASSSH EEEEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCHHHCCCCCE VQVRLAQGAPPLTTAVSLSNLGQGTLALQGALVNGAAWLTATTAGNAAVLTFDAGSMSPG EEEEEECCCCCCEEEEEHHCCCCCEEEEEEEEECCEEEEEEECCCCEEEEEEECCCCCCC TYSGTVTLTSNAANIIAPIPVDFTVVAKGAPVINYQGVVDNGTFAAGDTVARGDVMVVLG CEEEEEEEECCCCEEEEECCCCEEEEECCCCEEEEEEEECCCCEECCCEEECCCEEEEEC DQLSFAPLTVGKAPPLDTQVGGASVTVNGRQAPMYYSSYGQLAFQLPYEISNGTAVVQVQ CCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEECEEECCCEEEEEEE RDGLSSNPVSVQVADRAPRLLLIGVGTYGAIQNQDLSIPMPVGSFPGVNTHPAKAGDALT ECCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEE IYAIGLGPTNPGVVSGQPAPATSPFAPLTATATINFGAGPGGMVVVPLYAGLTPTFAGLY EEEEEECCCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCEEEEE QINVVVPPGLPKGAIDLTVNFSDSSSNAVQIYVQ EEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA