Click here to switch to the map view.

The map label for this gene is 116622680

Identifier: 116622680

GI number: 116622680

Start: 4530020

End: 4530907

Strand: Reverse

Name: 116622680

Synonym: Acid_3579

Alternate gene names: NA

Gene position: 4530907-4530020 (Counterclockwise)

Preceding gene: 116622684

Following gene: 116622679

Centisome position: 45.47

GC content: 58.67

Gene sequence:

>888_bases
ATGGGAGACGTTCTGGGTAAGAATAGCCTTTTCACCGGCATAGCCAAAGCCGCATTTCTTACGCTTTTTGTGGCGGTAAT
AACTGCTCCGAACGCGTGGGGAACTTATATCATTTTCGGGCAGTCCGCCACCACGGTCTCCACCGGGGCACAGGTCCATC
CGCAGGCAACCTTCACCTTCGATACCACCGCGCACACCATCGAGATTGAACTCTTGAACCTCCAGCAAAATGCGGGGGGC
GTTATCCAACTCATCAGCGGTATTGAATTCACGCTCTCGAACTACTCGGGATTGGTGGGCGGCAGCGTGCCCGTTGCGAC
TGATTTCAGCCTGGTCAGCCTTGGCAATGGCGGCGTTCCCACGGTCTCTACCGGGGTTGCGGGCTGGGCGTTTCAGAGCC
TGACCACCACCACCATGACTCTGTGCGCGATCTGCAATCCGGCGGTCACGGTTGCAACTCCAGACGCCGGACCCAGCAAA
CTTATCCTCGGCGGCCCAGATCCGGCCACCGGGTTGGCGGACACCTACTCCAATGCCAACGGCTCGATGCTGAATAGCGG
CCACAATCCCTTCATTCTAGGCAGCGGAGACACCTACAGCGCGGGCTCGACGCTCGGGCCGGCCGCAAAATCGACGCCGA
CGTGGGTGCTCAGCGTGCCCAACATCACGGCCGCCACCACGGTCAGTTCGGTGACGTTCCATTTCAACACCACCTACAGT
ACGACGGCGGATTACGAGGTCGATAACTTTGGTTATACGCCCGAACCGGAGTCGAATATTCTGATGATCACCGGACTGGG
AATGGTGTTGCTCGCTGGCGGCGCGCGGCGCTATCGAAATCGACGAAGCCTGGTACCGGCGCTACCGAAAACTCCAACAG
TAACCTAA

Upstream 100 bases:

>100_bases
TGTGTATTCATTGACTTGCCAAAATCGCTCGGCTAGCCTTGTAAAGATTATTACCGAATTGATCGTCCAATAAAAATTTC
TTGATTCGTTCGATGAGGGT

Downstream 100 bases:

>100_bases
GACCTATTGTTTTGGGCCGCATCGGCCGATTAGGTTGTTAGTTAGAGTGTCTTGCGCGAGTAGTCGCGGAGCCTGTCTAG
GACTCTTGTTGTGGATGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MGDVLGKNSLFTGIAKAAFLTLFVAVITAPNAWGTYIIFGQSATTVSTGAQVHPQATFTFDTTAHTIEIELLNLQQNAGG
VIQLISGIEFTLSNYSGLVGGSVPVATDFSLVSLGNGGVPTVSTGVAGWAFQSLTTTTMTLCAICNPAVTVATPDAGPSK
LILGGPDPATGLADTYSNANGSMLNSGHNPFILGSGDTYSAGSTLGPAAKSTPTWVLSVPNITAATTVSSVTFHFNTTYS
TTADYEVDNFGYTPEPESNILMITGLGMVLLAGGARRYRNRRSLVPALPKTPTVT

Sequences:

>Translated_295_residues
MGDVLGKNSLFTGIAKAAFLTLFVAVITAPNAWGTYIIFGQSATTVSTGAQVHPQATFTFDTTAHTIEIELLNLQQNAGG
VIQLISGIEFTLSNYSGLVGGSVPVATDFSLVSLGNGGVPTVSTGVAGWAFQSLTTTTMTLCAICNPAVTVATPDAGPSK
LILGGPDPATGLADTYSNANGSMLNSGHNPFILGSGDTYSAGSTLGPAAKSTPTWVLSVPNITAATTVSSVTFHFNTTYS
TTADYEVDNFGYTPEPESNILMITGLGMVLLAGGARRYRNRRSLVPALPKTPTVT
>Mature_294_residues
GDVLGKNSLFTGIAKAAFLTLFVAVITAPNAWGTYIIFGQSATTVSTGAQVHPQATFTFDTTAHTIEIELLNLQQNAGGV
IQLISGIEFTLSNYSGLVGGSVPVATDFSLVSLGNGGVPTVSTGVAGWAFQSLTTTTMTLCAICNPAVTVATPDAGPSKL
ILGGPDPATGLADTYSNANGSMLNSGHNPFILGSGDTYSAGSTLGPAAKSTPTWVLSVPNITAATTVSSVTFHFNTTYST
TADYEVDNFGYTPEPESNILMITGLGMVLLAGGARRYRNRRSLVPALPKTPTVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30324; Mature: 30192

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDVLGKNSLFTGIAKAAFLTLFVAVITAPNAWGTYIIFGQSATTVSTGAQVHPQATFTF
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCEECCCEEEEE
DTTAHTIEIELLNLQQNAGGVIQLISGIEFTLSNYSGLVGGSVPVATDFSLVSLGNGGVP
CCCEEEEEEEEEEECCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCC
TVSTGVAGWAFQSLTTTTMTLCAICNPAVTVATPDAGPSKLILGGPDPATGLADTYSNAN
CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCHHHCCCCC
GSMLNSGHNPFILGSGDTYSAGSTLGPAAKSTPTWVLSVPNITAATTVSSVTFHFNTTYS
CCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEEECCCC
TTADYEVDNFGYTPEPESNILMITGLGMVLLAGGARRYRNRRSLVPALPKTPTVT
CCCCEEECCCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
GDVLGKNSLFTGIAKAAFLTLFVAVITAPNAWGTYIIFGQSATTVSTGAQVHPQATFTF
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCEECCCEEEEE
DTTAHTIEIELLNLQQNAGGVIQLISGIEFTLSNYSGLVGGSVPVATDFSLVSLGNGGVP
CCCEEEEEEEEEEECCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCC
TVSTGVAGWAFQSLTTTTMTLCAICNPAVTVATPDAGPSKLILGGPDPATGLADTYSNAN
CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCHHHCCCCC
GSMLNSGHNPFILGSGDTYSAGSTLGPAAKSTPTWVLSVPNITAATTVSSVTFHFNTTYS
CCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEEECCCC
TTADYEVDNFGYTPEPESNILMITGLGMVLLAGGARRYRNRRSLVPALPKTPTVT
CCCCEEECCCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA