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The map label for this gene is yebA [C]

Identifier: 116622668

GI number: 116622668

Start: 4517833

End: 4518735

Strand: Reverse

Name: yebA [C]

Synonym: Acid_3567

Alternate gene names: 116622668

Gene position: 4518735-4517833 (Counterclockwise)

Preceding gene: 116622670

Following gene: 116622667

Centisome position: 45.34

GC content: 59.36

Gene sequence:

>903_bases
ATGAAACAGGAATATTTTGTTCTGGTTTTGGCCCACTCGATTCGTGGGCGGTTGCGACGCGTTCACATACCTCATACCGC
GGTTTATGCAGTTCTCGGTTTAGCTCTTCTAGGTTGTTTCTCCGCATTCGGATTCGTCGCCAGTTATGCCCGCATGGCGT
TTAAAGTCGCCAATTACAATGCACTGAAGAGTGAGGCCGACGCGCTTCGCACGCGTTACCAGAATCTGCAGAAAGTGGTC
AGCGAGACCAACGTGCAGATGGCCAGCCTGCAACTGTACGCCAAGGAAGTTTCCGTGGCATACGGAATTAAGCAGAAACT
GGAAGGCCCGTCGGACATCACCGCGGAAGGCAAACTGGTCCCGAGTTTTGCAGAAAGCTTGAACGAATATAACTACCTGG
TGAGCGCCGAAAAGCTCTCGATGTCCAACCGGAGATCGCGGAGTTTCAGCGGCCTCGGCGGCATCAAGGCTGTGCCGAGC
CTGTGGCCGGTGGAAGGCCGACTGATGAGCGGCTTCGCGCAGCGCACGGACCCGTTCTCGGGTGAAGGCGCGTTCCACAA
GGGCGTGGATATCACGGCGCCCACGGGCACCACTGTTCGGACCACGGCGGATGGCGTGGTGATCCAGGCCGAGATGGTCG
CGGGCGGCTACGGGCGCCTGGTGATCGTGGATCACGGCAACGGCGTGCAAACCTATTACGCGCACTTGTCGAAGATTTCG
GTCCACGCAGGGCAGGAAGTGCGCCGCGGCGAAATCGTGGGCCTGGTCGGCAGCAGCGGACGCACCACGGCGCCGCATTT
GCACTACGAGGTCCGGGTGGGCGGCACCCCGATGAATCCTTCGCGGTATCTGGCGAACTCCACGATCTTCCGGCAGGCGC
CGAAAGATATTCCGTTCCAGTAG

Upstream 100 bases:

>100_bases
TTTGAGATTCGCCAATGTATTTTGTTAGAAATAGCCCCACCGGGCCCCCGGGGAATCTTGTTTCGCCCCGAATCCAAAAG
GGAGTCCGGCCGGAGAGACT

Downstream 100 bases:

>100_bases
ATTCAGAGGGCCTTCCTGGGGAAGGCTTTCTTTTCTCGCGGAGCCGCAGAGCCGCAGAGTAACGCAAAGAAAAACGACGA
AGATCCAGCAGCCGCTACTT

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKQEYFVLVLAHSIRGRLRRVHIPHTAVYAVLGLALLGCFSAFGFVASYARMAFKVANYNALKSEADALRTRYQNLQKVV
SETNVQMASLQLYAKEVSVAYGIKQKLEGPSDITAEGKLVPSFAESLNEYNYLVSAEKLSMSNRRSRSFSGLGGIKAVPS
LWPVEGRLMSGFAQRTDPFSGEGAFHKGVDITAPTGTTVRTTADGVVIQAEMVAGGYGRLVIVDHGNGVQTYYAHLSKIS
VHAGQEVRRGEIVGLVGSSGRTTAPHLHYEVRVGGTPMNPSRYLANSTIFRQAPKDIPFQ

Sequences:

>Translated_300_residues
MKQEYFVLVLAHSIRGRLRRVHIPHTAVYAVLGLALLGCFSAFGFVASYARMAFKVANYNALKSEADALRTRYQNLQKVV
SETNVQMASLQLYAKEVSVAYGIKQKLEGPSDITAEGKLVPSFAESLNEYNYLVSAEKLSMSNRRSRSFSGLGGIKAVPS
LWPVEGRLMSGFAQRTDPFSGEGAFHKGVDITAPTGTTVRTTADGVVIQAEMVAGGYGRLVIVDHGNGVQTYYAHLSKIS
VHAGQEVRRGEIVGLVGSSGRTTAPHLHYEVRVGGTPMNPSRYLANSTIFRQAPKDIPFQ
>Mature_300_residues
MKQEYFVLVLAHSIRGRLRRVHIPHTAVYAVLGLALLGCFSAFGFVASYARMAFKVANYNALKSEADALRTRYQNLQKVV
SETNVQMASLQLYAKEVSVAYGIKQKLEGPSDITAEGKLVPSFAESLNEYNYLVSAEKLSMSNRRSRSFSGLGGIKAVPS
LWPVEGRLMSGFAQRTDPFSGEGAFHKGVDITAPTGTTVRTTADGVVIQAEMVAGGYGRLVIVDHGNGVQTYYAHLSKIS
VHAGQEVRRGEIVGLVGSSGRTTAPHLHYEVRVGGTPMNPSRYLANSTIFRQAPKDIPFQ

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=115, Percent_Identity=44.3478260869565, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1789099, Length=123, Percent_Identity=37.3983739837398, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI87082297, Length=134, Percent_Identity=37.3134328358209, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082174, Length=124, Percent_Identity=32.258064516129, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 32630; Mature: 32630

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQEYFVLVLAHSIRGRLRRVHIPHTAVYAVLGLALLGCFSAFGFVASYARMAFKVANYN
CCCCEEEEEEEHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ALKSEADALRTRYQNLQKVVSETNVQMASLQLYAKEVSVAYGIKQKLEGPSDITAEGKLV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PSFAESLNEYNYLVSAEKLSMSNRRSRSFSGLGGIKAVPSLWPVEGRLMSGFAQRTDPFS
HHHHHHHHHHHEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
GEGAFHKGVDITAPTGTTVRTTADGVVIQAEMVAGGYGRLVIVDHGNGVQTYYAHLSKIS
CCCCEECCEEEECCCCCEEEEECCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHE
VHAGQEVRRGEIVGLVGSSGRTTAPHLHYEVRVGGTPMNPSRYLANSTIFRQAPKDIPFQ
ECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHCCHHHHCCCCCCCCC
>Mature Secondary Structure
MKQEYFVLVLAHSIRGRLRRVHIPHTAVYAVLGLALLGCFSAFGFVASYARMAFKVANYN
CCCCEEEEEEEHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ALKSEADALRTRYQNLQKVVSETNVQMASLQLYAKEVSVAYGIKQKLEGPSDITAEGKLV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PSFAESLNEYNYLVSAEKLSMSNRRSRSFSGLGGIKAVPSLWPVEGRLMSGFAQRTDPFS
HHHHHHHHHHHEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
GEGAFHKGVDITAPTGTTVRTTADGVVIQAEMVAGGYGRLVIVDHGNGVQTYYAHLSKIS
CCCCEECCEEEECCCCCEEEEECCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHE
VHAGQEVRRGEIVGLVGSSGRTTAPHLHYEVRVGGTPMNPSRYLANSTIFRQAPKDIPFQ
ECCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]