| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622632
Identifier: 116622632
GI number: 116622632
Start: 4472767
End: 4473333
Strand: Reverse
Name: 116622632
Synonym: Acid_3531
Alternate gene names: NA
Gene position: 4473333-4472767 (Counterclockwise)
Preceding gene: 116622633
Following gene: 116622631
Centisome position: 44.89
GC content: 58.38
Gene sequence:
>567_bases TTGAACGCTTTATCGATAACACGACAGTTCCTGACCATCGGAATTTTCTCGGCATGCTTGTACGCAGCGCCGATCCAATA CAGCATCGCCTTCAACGGCGGCTCACCGACTCCAACTGCGGGGTCTTTCACGTACGATGCCGTCACCACTCAATTCTCGT CGTTCCTCGTGGACTGGCACGGCGCTACTTTTGATCTGACAATTTCCGCAAACAGTCCGATCGGGTCCAATGGCTGTTCT GCGACCGCAGCGCAGTTTTTCGCGGTAATGACAGGGGGACCGGGTGCGTGCGCAGGCACGAATACCCTTGGCTGGCTCGC TGCCATAACGAGCCCGGGGCAGGGTGCCTTCGCCATAAGCGATACAGGCACCGGCAGCGGCCCTCCAGTTGTCGGGATAG GAAATCAAACCGTAAGCCCGGCCCTGCTTACTGTTTCTACCAGTACTTCCGGAAGTTTCCTGGTGACTGAGGTGACGCAG GCGCCGGAACCGTCATCCCTTGTTCTGGCGGTCGGAGGCATCGTCCTGCTCGGATTTACGCGGCGGACGAGAAGGCTGGC CAACTGA
Upstream 100 bases:
>100_bases GAACTTTTGGGACAAAAGTATACCTTAACCTGGAAACGTTGAATGTACCTGCTAAGATGTCTCGATACTGGCGAACGTCT AACCGGCTCGGAGGGGCTAT
Downstream 100 bases:
>100_bases TTCACCAGGTATAACGCAAATGCTGAAAGGGTTTCTTGCTGAACCTGAGCTTGTCATTCAGCCGAAACCCTTAAGCTCTC TCCGGCGTCTTCCGCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MNALSITRQFLTIGIFSACLYAAPIQYSIAFNGGSPTPTAGSFTYDAVTTQFSSFLVDWHGATFDLTISANSPIGSNGCS ATAAQFFAVMTGGPGACAGTNTLGWLAAITSPGQGAFAISDTGTGSGPPVVGIGNQTVSPALLTVSTSTSGSFLVTEVTQ APEPSSLVLAVGGIVLLGFTRRTRRLAN
Sequences:
>Translated_188_residues MNALSITRQFLTIGIFSACLYAAPIQYSIAFNGGSPTPTAGSFTYDAVTTQFSSFLVDWHGATFDLTISANSPIGSNGCS ATAAQFFAVMTGGPGACAGTNTLGWLAAITSPGQGAFAISDTGTGSGPPVVGIGNQTVSPALLTVSTSTSGSFLVTEVTQ APEPSSLVLAVGGIVLLGFTRRTRRLAN >Mature_188_residues MNALSITRQFLTIGIFSACLYAAPIQYSIAFNGGSPTPTAGSFTYDAVTTQFSSFLVDWHGATFDLTISANSPIGSNGCS ATAAQFFAVMTGGPGACAGTNTLGWLAAITSPGQGAFAISDTGTGSGPPVVGIGNQTVSPALLTVSTSTSGSFLVTEVTQ APEPSSLVLAVGGIVLLGFTRRTRRLAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18952; Mature: 18952
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALSITRQFLTIGIFSACLYAAPIQYSIAFNGGSPTPTAGSFTYDAVTTQFSSFLVDWH CCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHEEEEC GATFDLTISANSPIGSNGCSATAAQFFAVMTGGPGACAGTNTLGWLAAITSPGQGAFAIS CCEEEEEEECCCCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEE DTGTGSGPPVVGIGNQTVSPALLTVSTSTSGSFLVTEVTQAPEPSSLVLAVGGIVLLGFT CCCCCCCCCEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCEEEEECC RRTRRLAN HHHHHCCC >Mature Secondary Structure MNALSITRQFLTIGIFSACLYAAPIQYSIAFNGGSPTPTAGSFTYDAVTTQFSSFLVDWH CCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHEEEEC GATFDLTISANSPIGSNGCSATAAQFFAVMTGGPGACAGTNTLGWLAAITSPGQGAFAIS CCEEEEEEECCCCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEE DTGTGSGPPVVGIGNQTVSPALLTVSTSTSGSFLVTEVTQAPEPSSLVLAVGGIVLLGFT CCCCCCCCCEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCEEEEECC RRTRRLAN HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA