| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB [H]
Identifier: 116622616
GI number: 116622616
Start: 4448628
End: 4451075
Strand: Direct
Name: macB [H]
Synonym: Acid_3515
Alternate gene names: 116622616
Gene position: 4448628-4451075 (Clockwise)
Preceding gene: 116622615
Following gene: 116622617
Centisome position: 44.64
GC content: 66.34
Gene sequence:
>2448_bases ATGCGACATGTCCTCCGCCGCCTCGCGCGCTCACCGATGTTTACCGCCGTCTCGCTGGCCACTCTCGCCATCGGCATCGG CGCCAACACCGCGATCTTCAGCGTGATTAACGGCGTCCTACTCAAGCCGCTCCCCTATCCCCATTCCGAGCAGCTCATCG CCCTCTGGCACTCCGCGCCCGGCATCAATATCAAGGAACTCGCCATGGCGCCGTCGCTGTACTTCACGTACGCCGACGAA AATCGCGTCTTCCAGGACGTCGCCATGTGGACCACCAGCACTTCCAGCGTCACCGGACTTGCCGAGCCCGAGGAGGTCCC GCTCCTCTCCGTCACCAACCGCTTCTTCCCCATCCTCCACGCGCAGCCCGCCCTCGGCCGCGCTTTCACCGCCGCCGATG ACGACCCCAAAAGCGAGCGCATCGTGATCCTCTCCGATGCCTGGTGGAAGACCCGCTTTGGCGGCGACCCCGCCATTCTC GGCCGCCGCATCACGGTGGATGGGGTTCCCCGCGAAGTTGTCGGTGTGCTGCCCCCCGCCTTCCGCTTCATGGACCGCAA GCTCACCCTCGTGGTTCCCCTGCGTTTCAACCGCGCCGAGGTGCGCCTCATCAACTTCAGCTACCAGGGCATCGCCCGCC TCAAGCCCGGCGTCACGCTCCAACAGGCCGCCGCCGATGTCGCGCGCATGATTCCTCTGGCACCCGTGAAGTTCCCAGCG AATCCCGATTTCAGCGTCGGAATGTTCTCGAGCGCCCGCATCACTCCCAACCTGCGCTTTCTGAAAGATCACCTGCTGGG TGACATCGGAAACACGCTCTGGGTGCTGATGGGAACCGTCGGGATCGTCCTCCTCATCGCCTGCGCCAACGTCGCCAATC TCCTCCTGGTGCGCGCCGACGGGCGGCGCCAGGAACTCGCGATCCGTGCAGCCCTGGGCGCCGGCTGGGGACGCATCGCG CGCGAACTTCTGCTCGAGAGCATGTCGCTCGGCCTGTCCGGCGGCGCGCTCGGTTTGGCCCTGGCCTACCTCGCGCTCCG TTTGCTCGCCGCCTCCGAGATTGCGCACCTGCCGCGCGCCGGCGAAATCTCCATCGATCCCCTCGTCCTGGCTTACACGC TCGCCATCTCGCTCGCCGCCGGCTTGGTTTTCGGCCTGATTCCCGTCTTCAAGTACGCGCGCCCGCAACTGTCGAATGCC CTGCGCGGCGGCGGCCGGACCCTCAGCCAAAGCCGCGACCGCCACCGCGCGCGCAGCGTCCTCGTCATGGTGCAAGTGGC GCTCGCCATGGTGCTCCTGGTCAGCTCCGGCCTGATGATCCGCACCTTCCAGGCCCTGCGCCACGTGGACCCCGGCTTCT CCCACCCAGAGAATGTTCAGCTTCTGCGCATCGCGATTCCGGAAGCGCAAGTCCAGGATCCCGAGCGCGTGCTGCGTATG CAACACGAGATTCTGAACCGTCTTGCAGCTCTCCCCGGTATCTCCGCGTCCGCACTCACCGACGCGGTAACGATGGACGG CCGCGATTCCAACGATCCGGTGTACGCCGAAGATCACGTCTATCGCGAAGGCACCATTCCGCCCATCCATCGCTTCAAAT TCGTTTCGCCCGGCTATGTCGCGGCCATGGGCAACCGCCTGATCGCCGGCCGCGGGTTCACCTGGAACGACCTGTACACC CAGGCGCCTGTCGCGCTCGTCTCCGAAAATGCCGCGCGTGCCATGTGGCAGACTCCGCACGCCGCCATCGGCAAACGCAT CCGCGCCGGCCAGAAAGACGATTGGCGCGAGGTCATCGGAGTCCTCGCCGACGAGCGCTCCGACGGCGTCGACCGCCATC CGCCCACCACCGTCTATTGGCCGCTGATGCCGAAAAATTTCCAGGGCCAGTCCGTCCGCGTAGTCCGAAGCGTCGCCTTC GTGCTCCGCACCCCGCGCGCGGGCTCCACAACCTTGCAGCCCGAACTCCGCCAGGCCGTGTGGAGCGTGAATCCGAATCT GCCGCTCTCCGGCGTCAGCACCCTGCAGACTATCTACGATCGCTCCCTGTCACGCACTTCTTTCACGCTGCTGATGCTCG CCATCGCCGGCGGAATGGCGCTGCTGCTCGGTCTGGTCGGTATTTACGGCGTGATCTCTTACTCCGTCTCCCAGCGTACG CGCGAAATCGGCATACGCCTGGCGCTGGGCGCTCCGCGGCCGGAAGTCACGCGCATGTTCGTGCGCCACGGACTCGCGCT GTCGGCCGCCGGCGCCGTCTTCGGCCTCGCCGCCGCGCTTGCTCTTACCCGCCTCATGCGCGCGCTCCTCTTCGATGTCA GCCCCACCGATCCGGTCACGTATCTCGCCGTGTTGTCCGCCCTAATTCTCGCTGCCGCCCTGGCCAGCTACCTGCCCGCT CGCCGCGCCTCCTCCGTCGATCCCGCGGACGCACTTCGCGCCGAGTAG
Upstream 100 bases:
>100_bases GGAGCGAATGGCCCGTTCGGAGTCGGCGCTGTCACCGCCTTCTCCGCCGCTGCCTACATCTACCTAACTTCTGCCGCCCC GCGGCGTATCTTAATACAAG
Downstream 100 bases:
>100_bases TCAGGCGTCCCGCGCTCGGCCCGTGCTACCATCCCAGGAAATATGCAACTTCGCCGTCTCGCCCTCCTGCCCCTGGCCTG TACCCTCCTCGCCACCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 815; Mature: 815
Protein sequence:
>815_residues MRHVLRRLARSPMFTAVSLATLAIGIGANTAIFSVINGVLLKPLPYPHSEQLIALWHSAPGINIKELAMAPSLYFTYADE NRVFQDVAMWTTSTSSVTGLAEPEEVPLLSVTNRFFPILHAQPALGRAFTAADDDPKSERIVILSDAWWKTRFGGDPAIL GRRITVDGVPREVVGVLPPAFRFMDRKLTLVVPLRFNRAEVRLINFSYQGIARLKPGVTLQQAAADVARMIPLAPVKFPA NPDFSVGMFSSARITPNLRFLKDHLLGDIGNTLWVLMGTVGIVLLIACANVANLLLVRADGRRQELAIRAALGAGWGRIA RELLLESMSLGLSGGALGLALAYLALRLLAASEIAHLPRAGEISIDPLVLAYTLAISLAAGLVFGLIPVFKYARPQLSNA LRGGGRTLSQSRDRHRARSVLVMVQVALAMVLLVSSGLMIRTFQALRHVDPGFSHPENVQLLRIAIPEAQVQDPERVLRM QHEILNRLAALPGISASALTDAVTMDGRDSNDPVYAEDHVYREGTIPPIHRFKFVSPGYVAAMGNRLIAGRGFTWNDLYT QAPVALVSENAARAMWQTPHAAIGKRIRAGQKDDWREVIGVLADERSDGVDRHPPTTVYWPLMPKNFQGQSVRVVRSVAF VLRTPRAGSTTLQPELRQAVWSVNPNLPLSGVSTLQTIYDRSLSRTSFTLLMLAIAGGMALLLGLVGIYGVISYSVSQRT REIGIRLALGAPRPEVTRMFVRHGLALSAAGAVFGLAAALALTRLMRALLFDVSPTDPVTYLAVLSALILAAALASYLPA RRASSVDPADALRAE
Sequences:
>Translated_815_residues MRHVLRRLARSPMFTAVSLATLAIGIGANTAIFSVINGVLLKPLPYPHSEQLIALWHSAPGINIKELAMAPSLYFTYADE NRVFQDVAMWTTSTSSVTGLAEPEEVPLLSVTNRFFPILHAQPALGRAFTAADDDPKSERIVILSDAWWKTRFGGDPAIL GRRITVDGVPREVVGVLPPAFRFMDRKLTLVVPLRFNRAEVRLINFSYQGIARLKPGVTLQQAAADVARMIPLAPVKFPA NPDFSVGMFSSARITPNLRFLKDHLLGDIGNTLWVLMGTVGIVLLIACANVANLLLVRADGRRQELAIRAALGAGWGRIA RELLLESMSLGLSGGALGLALAYLALRLLAASEIAHLPRAGEISIDPLVLAYTLAISLAAGLVFGLIPVFKYARPQLSNA LRGGGRTLSQSRDRHRARSVLVMVQVALAMVLLVSSGLMIRTFQALRHVDPGFSHPENVQLLRIAIPEAQVQDPERVLRM QHEILNRLAALPGISASALTDAVTMDGRDSNDPVYAEDHVYREGTIPPIHRFKFVSPGYVAAMGNRLIAGRGFTWNDLYT QAPVALVSENAARAMWQTPHAAIGKRIRAGQKDDWREVIGVLADERSDGVDRHPPTTVYWPLMPKNFQGQSVRVVRSVAF VLRTPRAGSTTLQPELRQAVWSVNPNLPLSGVSTLQTIYDRSLSRTSFTLLMLAIAGGMALLLGLVGIYGVISYSVSQRT REIGIRLALGAPRPEVTRMFVRHGLALSAAGAVFGLAAALALTRLMRALLFDVSPTDPVTYLAVLSALILAAALASYLPA RRASSVDPADALRAE >Mature_815_residues MRHVLRRLARSPMFTAVSLATLAIGIGANTAIFSVINGVLLKPLPYPHSEQLIALWHSAPGINIKELAMAPSLYFTYADE NRVFQDVAMWTTSTSSVTGLAEPEEVPLLSVTNRFFPILHAQPALGRAFTAADDDPKSERIVILSDAWWKTRFGGDPAIL GRRITVDGVPREVVGVLPPAFRFMDRKLTLVVPLRFNRAEVRLINFSYQGIARLKPGVTLQQAAADVARMIPLAPVKFPA NPDFSVGMFSSARITPNLRFLKDHLLGDIGNTLWVLMGTVGIVLLIACANVANLLLVRADGRRQELAIRAALGAGWGRIA RELLLESMSLGLSGGALGLALAYLALRLLAASEIAHLPRAGEISIDPLVLAYTLAISLAAGLVFGLIPVFKYARPQLSNA LRGGGRTLSQSRDRHRARSVLVMVQVALAMVLLVSSGLMIRTFQALRHVDPGFSHPENVQLLRIAIPEAQVQDPERVLRM QHEILNRLAALPGISASALTDAVTMDGRDSNDPVYAEDHVYREGTIPPIHRFKFVSPGYVAAMGNRLIAGRGFTWNDLYT QAPVALVSENAARAMWQTPHAAIGKRIRAGQKDDWREVIGVLADERSDGVDRHPPTTVYWPLMPKNFQGQSVRVVRSVAF VLRTPRAGSTTLQPELRQAVWSVNPNLPLSGVSTLQTIYDRSLSRTSFTLLMLAIAGGMALLLGLVGIYGVISYSVSQRT REIGIRLALGAPRPEVTRMFVRHGLALSAAGAVFGLAAALALTRLMRALLFDVSPTDPVTYLAVLSALILAAALASYLPA RRASSVDPADALRAE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=298, Percent_Identity=25.8389261744966, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 88416; Mature: 88416
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVLRRLARSPMFTAVSLATLAIGIGANTAIFSVINGVLLKPLPYPHSEQLIALWHSAP CHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC GINIKELAMAPSLYFTYADENRVFQDVAMWTTSTSSVTGLAEPEEVPLLSVTNRFFPILH CCCHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHC AQPALGRAFTAADDDPKSERIVILSDAWWKTRFGGDPAILGRRITVDGVPREVVGVLPPA CCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCEEEECCCCHHHHHCCCHH FRFMDRKLTLVVPLRFNRAEVRLINFSYQGIARLKPGVTLQQAAADVARMIPLAPVKFPA HHHHCCCEEEEEEEEECCEEEEEEEECCCCHHHCCCCCHHHHHHHHHHHHCCCCCEECCC NPDFSVGMFSSARITPNLRFLKDHLLGDIGNTLWVLMGTVGIVLLIACANVANLLLVRAD CCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC GRRQELAIRAALGAGWGRIARELLLESMSLGLSGGALGLALAYLALRLLAASEIAHLPRA CCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC GEISIDPLVLAYTLAISLAAGLVFGLIPVFKYARPQLSNALRGGGRTLSQSRDRHRARSV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHH LVMVQVALAMVLLVSSGLMIRTFQALRHVDPGFSHPENVQLLRIAIPEAQVQDPERVLRM HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHH QHEILNRLAALPGISASALTDAVTMDGRDSNDPVYAEDHVYREGTIPPIHRFKFVSPGYV HHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCEEECCCEECCCCCCHHHHEEECCCCHH AAMGNRLIAGRGFTWNDLYTQAPVALVSENAARAMWQTPHAAIGKRIRAGQKDDWREVIG HHHCCEEEECCCCCCHHHHHHCCHHHHCCHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHH VLADERSDGVDRHPPTTVYWPLMPKNFQGQSVRVVRSVAFVLRTPRAGSTTLQPELRQAV HHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH WSVNPNLPLSGVSTLQTIYDRSLSRTSFTLLMLAIAGGMALLLGLVGIYGVISYSVSQRT HCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REIGIRLALGAPRPEVTRMFVRHGLALSAAGAVFGLAAALALTRLMRALLFDVSPTDPVT HHCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH YLAVLSALILAAALASYLPARRASSVDPADALRAE HHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHCCC >Mature Secondary Structure MRHVLRRLARSPMFTAVSLATLAIGIGANTAIFSVINGVLLKPLPYPHSEQLIALWHSAP CHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC GINIKELAMAPSLYFTYADENRVFQDVAMWTTSTSSVTGLAEPEEVPLLSVTNRFFPILH CCCHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHC AQPALGRAFTAADDDPKSERIVILSDAWWKTRFGGDPAILGRRITVDGVPREVVGVLPPA CCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCEEEECCCCHHHHHCCCHH FRFMDRKLTLVVPLRFNRAEVRLINFSYQGIARLKPGVTLQQAAADVARMIPLAPVKFPA HHHHCCCEEEEEEEEECCEEEEEEEECCCCHHHCCCCCHHHHHHHHHHHHCCCCCEECCC NPDFSVGMFSSARITPNLRFLKDHLLGDIGNTLWVLMGTVGIVLLIACANVANLLLVRAD CCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC GRRQELAIRAALGAGWGRIARELLLESMSLGLSGGALGLALAYLALRLLAASEIAHLPRA CCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC GEISIDPLVLAYTLAISLAAGLVFGLIPVFKYARPQLSNALRGGGRTLSQSRDRHRARSV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHH LVMVQVALAMVLLVSSGLMIRTFQALRHVDPGFSHPENVQLLRIAIPEAQVQDPERVLRM HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHH QHEILNRLAALPGISASALTDAVTMDGRDSNDPVYAEDHVYREGTIPPIHRFKFVSPGYV HHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCEEECCCEECCCCCCHHHHEEECCCCHH AAMGNRLIAGRGFTWNDLYTQAPVALVSENAARAMWQTPHAAIGKRIRAGQKDDWREVIG HHHCCEEEECCCCCCHHHHHHCCHHHHCCHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHH VLADERSDGVDRHPPTTVYWPLMPKNFQGQSVRVVRSVAFVLRTPRAGSTTLQPELRQAV HHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH WSVNPNLPLSGVSTLQTIYDRSLSRTSFTLLMLAIAGGMALLLGLVGIYGVISYSVSQRT HCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REIGIRLALGAPRPEVTRMFVRHGLALSAAGAVFGLAAALALTRLMRALLFDVSPTDPVT HHCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH YLAVLSALILAAALASYLPARRASSVDPADALRAE HHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]