| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is copA [H]
Identifier: 116622615
GI number: 116622615
Start: 4445499
End: 4447973
Strand: Direct
Name: copA [H]
Synonym: Acid_3513
Alternate gene names: 116622615
Gene position: 4445499-4447973 (Clockwise)
Preceding gene: 116622614
Following gene: 116622616
Centisome position: 44.61
GC content: 66.99
Gene sequence:
>2475_bases ATGAGTTCCTGCACGCTCTGCGGCCTTCCCGCCGGCCGCAACCCGCTCATCAATGGCGACCAGGCCTTCTGCTGCCTGGG CTGCCTCAACGTCTATTCCATCCTGGGCGAAAGCGGCGTCCTCGCCAGCGGCATCGATTTCCGCGACACCGATCTCTTCC GCGAAAGCCTCCGCCTGGGCCTCATCTCCACCGGCGCCGAACGCGTCAAGCCCACCATCCCCGACACCGCCGAACAGGTC GAAACCGTCTATCACGTATCCGGCATGTGGTGCGCCTCCTGCGCCTGGCTGATCGAGCGCGCCCTGCAATCCGAACGCGG CATTCGCTCCGCCGAAGTCATGTTCTCGAGCGACCTGGTCAAGGTCCGCTATTGTCCCCAGTACATTCCGCCCGCCCGCA TCACGGAGCGCATCGCCGCCCTCGGCTATCGCGCCAGCGAATACTCGGGCGCCTCCGAGTCCGACCACGCTGAGCGCAAA GCCATGCTGCTCCGCATCGGTGTCGCCGGCTTTCTCTGGCTCAACGTAATGATGCTCAGCCTGGTCATCTACGCCAGCTA CTGGGAAGCCATTTCCGACAACGCACGCCGTGTCATTCCCTTCGTCCTGATGGCCCTGACCACACCCGCCGTCTTTTATT CCGCCTGGCCCATTCTGCGCGCCGCCGCGATCGGCCTGCGCCACTTCACCGTGCGAATGGAAGCCTTGCTCGCCGTCGGC ATCACCGCGGCCTACACCTACAGCGCCGTGCAGGCCTTCACCGGCGGCAAGCATTACTATTTCGATACCGCCTGCGCGAT TATCACACTGGTGCTGCTCGGCAAACTCCTCGAGCGCGGCGCCAAGGAGCGCACCGCCAAAGCCATCTCGCTGCTCTACC GCATGATGCCCAAGAAAGCGCGCCTGCTGATCGACGGCCGCGAGACGTTCGTCTCCATCGAGGCCCTCCAGTCGGGCATG ACCTTCCTGGTCAAAGCCGGCGAGCGCATTCCCGCCGATGGCGTGGTGCTCGATGGTATCTCGCACGCCGACGAATCCGT CATCACCGGCGAATCCGCGCCCGTTGCCAAACAGCCCGGCGACCCCGTGATCTGCGGCAGCCTCAACACCGGCGGTGTGC TGGAGATCCGCGCCACCCGCACCGGCGCCGCCAGCACCCTGAGCCAGATCATCCGCTCCGTGGAGTCCGCCATGAGCAGT CGCTCGGAACTGGAGCGCACTGTCGATCGCGCTTCCCGCGCCTTCGCCCCCGCTGTGATCGCGATCGCGCTCGGCACCTT CTCCGTCTGCTCGCTCGCCGGCATGGATTCCGCCACCGCCCTGATGCGCGCCATCGCGGTCCTCGTGATCGCCTGCCCGT GCGCGCTCGGCATGGCCACGCCGCTTGCGATCACCGCCGCCGTGGGCGCCGCATCGCGACGCGGCATCCTGGTGAGCGAT AGCCGTGTTCTCGAAACCGTCCGCAAGATCGACGTAGCCATCCTGGATAAAACCGGCACCCTCACCGAAGGCGATTTCCG CGTAGTCGCTACCTTCCCCGCCGACAGCTCGCCCTTCCTCGCCGCCGTCTCCTCCATCGAGCAATACTCCGAGCATCCCC TCGGCCGCGCCATCACTCGCCGCGCCGCCGAGCTCGGCCTCACCCCGCACCCCGCGCGCGATATTGTCATTCACAAAGGT CTGGGAATCTCCGGCGTGACTGCGGGATCGCGCGTGTGGGTCGGCAATCGCCGCCTGATGGAGGAATGCGTCGGCCCGAT CGCGCCCGCCCTCGCGGCCGCTTCCTCCGCCTGGCAGCACGACGGCCACACCGTCGCCTTCTTCGCGTTCGATGGCAAAG TCGCCGGAGCCATCGCGATGGGCGATGCGATCCGTGCCGACGCCGTGCGCCTCGTCGCCGAACTCAAACGCCGCGGCATT CACACCGCGCTCATTTCGGGCGACGCGCACTCCACCACCGCCGCTATGGCCGCCGCCGCCGGCATCGCCGAGTTCCAGGC CGAGGTGCTCCCTGACGATAAGCTCGCGTGCGTGCGCCGCTACCAGTCCGCGGGCAAGATCGTCGCCATGCTCGGCGACG GCGTCAACGACGCTCCCGCGCTCGCCGGCGCCGATCTCGGCATCGCCCTCGGTACCGGCACCGACCTCGCCATGCAGGCC GCCCCCGTCGTGCTCATGACTCCCGCGCTCGATCGTGTGCTCGAAGTCTTCGACATCGGCCGCGACACCTGGCGCGTCGT CCGCCAGAATCTCTTCTGGGCCTTCTTCTACAATGCCGTGGGGATCACGCTGGCCGTCGCCGGTGTCTTAACCCCCATCC TCGCCGCCGCCGCCATGGTCCTTTCCAGCCTCTCCGTAATCGCCAACTCCCTGCGCCTCTCCGCAATGTGGGACCGCCAC CCCGGTGACGTCACCCAACGAGCCGCGGCCGTAAGGGAGCGCTACCCGCACGCTATCGAACGCAACGCTCCTTGA
Upstream 100 bases:
>100_bases TCGGCGTGGTCTTCGTGCTCTTCATCGGCATTCTGATCGCGGCCTACGTGATCGCGCGCGACGCCAACCCCGTCATGCTG GACGAGCACGGCCACGTGCG
Downstream 100 bases:
>100_bases GCGGTCGCGGCTCCTTATCGCTTCACCCGGATCATCCACGCCGCCGCAGCCCGATGTTCTCCCGGCATCTCCACCCGCAG TACGTCGCCGTCCTGCCTGA
Product: heavy metal translocating P-type ATPase
Products: ADP; Orthophosphate. [C]
Alternate protein names: NA
Number of amino acids: Translated: 824; Mature: 823
Protein sequence:
>824_residues MSSCTLCGLPAGRNPLINGDQAFCCLGCLNVYSILGESGVLASGIDFRDTDLFRESLRLGLISTGAERVKPTIPDTAEQV ETVYHVSGMWCASCAWLIERALQSERGIRSAEVMFSSDLVKVRYCPQYIPPARITERIAALGYRASEYSGASESDHAERK AMLLRIGVAGFLWLNVMMLSLVIYASYWEAISDNARRVIPFVLMALTTPAVFYSAWPILRAAAIGLRHFTVRMEALLAVG ITAAYTYSAVQAFTGGKHYYFDTACAIITLVLLGKLLERGAKERTAKAISLLYRMMPKKARLLIDGRETFVSIEALQSGM TFLVKAGERIPADGVVLDGISHADESVITGESAPVAKQPGDPVICGSLNTGGVLEIRATRTGAASTLSQIIRSVESAMSS RSELERTVDRASRAFAPAVIAIALGTFSVCSLAGMDSATALMRAIAVLVIACPCALGMATPLAITAAVGAASRRGILVSD SRVLETVRKIDVAILDKTGTLTEGDFRVVATFPADSSPFLAAVSSIEQYSEHPLGRAITRRAAELGLTPHPARDIVIHKG LGISGVTAGSRVWVGNRRLMEECVGPIAPALAAASSAWQHDGHTVAFFAFDGKVAGAIAMGDAIRADAVRLVAELKRRGI HTALISGDAHSTTAAMAAAAGIAEFQAEVLPDDKLACVRRYQSAGKIVAMLGDGVNDAPALAGADLGIALGTGTDLAMQA APVVLMTPALDRVLEVFDIGRDTWRVVRQNLFWAFFYNAVGITLAVAGVLTPILAAAAMVLSSLSVIANSLRLSAMWDRH PGDVTQRAAAVRERYPHAIERNAP
Sequences:
>Translated_824_residues MSSCTLCGLPAGRNPLINGDQAFCCLGCLNVYSILGESGVLASGIDFRDTDLFRESLRLGLISTGAERVKPTIPDTAEQV ETVYHVSGMWCASCAWLIERALQSERGIRSAEVMFSSDLVKVRYCPQYIPPARITERIAALGYRASEYSGASESDHAERK AMLLRIGVAGFLWLNVMMLSLVIYASYWEAISDNARRVIPFVLMALTTPAVFYSAWPILRAAAIGLRHFTVRMEALLAVG ITAAYTYSAVQAFTGGKHYYFDTACAIITLVLLGKLLERGAKERTAKAISLLYRMMPKKARLLIDGRETFVSIEALQSGM TFLVKAGERIPADGVVLDGISHADESVITGESAPVAKQPGDPVICGSLNTGGVLEIRATRTGAASTLSQIIRSVESAMSS RSELERTVDRASRAFAPAVIAIALGTFSVCSLAGMDSATALMRAIAVLVIACPCALGMATPLAITAAVGAASRRGILVSD SRVLETVRKIDVAILDKTGTLTEGDFRVVATFPADSSPFLAAVSSIEQYSEHPLGRAITRRAAELGLTPHPARDIVIHKG LGISGVTAGSRVWVGNRRLMEECVGPIAPALAAASSAWQHDGHTVAFFAFDGKVAGAIAMGDAIRADAVRLVAELKRRGI HTALISGDAHSTTAAMAAAAGIAEFQAEVLPDDKLACVRRYQSAGKIVAMLGDGVNDAPALAGADLGIALGTGTDLAMQA APVVLMTPALDRVLEVFDIGRDTWRVVRQNLFWAFFYNAVGITLAVAGVLTPILAAAAMVLSSLSVIANSLRLSAMWDRH PGDVTQRAAAVRERYPHAIERNAP >Mature_823_residues SSCTLCGLPAGRNPLINGDQAFCCLGCLNVYSILGESGVLASGIDFRDTDLFRESLRLGLISTGAERVKPTIPDTAEQVE TVYHVSGMWCASCAWLIERALQSERGIRSAEVMFSSDLVKVRYCPQYIPPARITERIAALGYRASEYSGASESDHAERKA MLLRIGVAGFLWLNVMMLSLVIYASYWEAISDNARRVIPFVLMALTTPAVFYSAWPILRAAAIGLRHFTVRMEALLAVGI TAAYTYSAVQAFTGGKHYYFDTACAIITLVLLGKLLERGAKERTAKAISLLYRMMPKKARLLIDGRETFVSIEALQSGMT FLVKAGERIPADGVVLDGISHADESVITGESAPVAKQPGDPVICGSLNTGGVLEIRATRTGAASTLSQIIRSVESAMSSR SELERTVDRASRAFAPAVIAIALGTFSVCSLAGMDSATALMRAIAVLVIACPCALGMATPLAITAAVGAASRRGILVSDS RVLETVRKIDVAILDKTGTLTEGDFRVVATFPADSSPFLAAVSSIEQYSEHPLGRAITRRAAELGLTPHPARDIVIHKGL GISGVTAGSRVWVGNRRLMEECVGPIAPALAAASSAWQHDGHTVAFFAFDGKVAGAIAMGDAIRADAVRLVAELKRRGIH TALISGDAHSTTAAMAAAAGIAEFQAEVLPDDKLACVRRYQSAGKIVAMLGDGVNDAPALAGADLGIALGTGTDLAMQAA PVVLMTPALDRVLEVFDIGRDTWRVVRQNLFWAFFYNAVGITLAVAGVLTPILAAAAMVLSSLSVIANSLRLSAMWDRHP GDVTQRAAAVRERYPHAIERNAP
Specific function: Involved in copper export [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HMA domains [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=783, Percent_Identity=33.4610472541507, Blast_Score=354, Evalue=2e-97, Organism=Homo sapiens, GI115529486, Length=816, Percent_Identity=31.4950980392157, Blast_Score=332, Evalue=8e-91, Organism=Homo sapiens, GI55743073, Length=583, Percent_Identity=35.8490566037736, Blast_Score=281, Evalue=2e-75, Organism=Homo sapiens, GI118498343, Length=162, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI48762691, Length=273, Percent_Identity=22.7106227106227, Blast_Score=67, Evalue=7e-11, Organism=Homo sapiens, GI48762687, Length=272, Percent_Identity=22.0588235294118, Blast_Score=67, Evalue=7e-11, Organism=Homo sapiens, GI48762689, Length=273, Percent_Identity=22.7106227106227, Blast_Score=67, Evalue=7e-11, Organism=Escherichia coli, GI1786691, Length=738, Percent_Identity=36.3143631436314, Blast_Score=373, Evalue=1e-104, Organism=Escherichia coli, GI1789879, Length=742, Percent_Identity=30.9973045822102, Blast_Score=265, Evalue=1e-71, Organism=Escherichia coli, GI1786914, Length=466, Percent_Identity=31.3304721030043, Blast_Score=152, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17556548, Length=786, Percent_Identity=31.0432569974555, Blast_Score=306, Evalue=4e-83, Organism=Caenorhabditis elegans, GI17531459, Length=132, Percent_Identity=34.0909090909091, Blast_Score=72, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17559224, Length=250, Percent_Identity=24, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71997262, Length=313, Percent_Identity=23.3226837060703, Blast_Score=66, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6320475, Length=751, Percent_Identity=29.4274300932091, Blast_Score=291, Evalue=2e-79, Organism=Saccharomyces cerevisiae, GI6319772, Length=595, Percent_Identity=30.2521008403361, Blast_Score=259, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6321430, Length=529, Percent_Identity=24.007561436673, Blast_Score=91, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6325221, Length=521, Percent_Identity=23.4165067178503, Blast_Score=88, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6321271, Length=175, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI221329854, Length=542, Percent_Identity=32.1033210332103, Blast_Score=218, Evalue=2e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR000695 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 87478; Mature: 87347
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: PS00154 ATPASE_E1_E2 ; PS01047 HMA_1 ; PS50846 HMA_2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSCTLCGLPAGRNPLINGDQAFCCLGCLNVYSILGESGVLASGIDFRDTDLFRESLRLG CCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHH LISTGAERVKPTIPDTAEQVETVYHVSGMWCASCAWLIERALQSERGIRSAEVMFSSDLV HHHCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCE KVRYCPQYIPPARITERIAALGYRASEYSGASESDHAERKAMLLRIGVAGFLWLNVMMLS EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LVIYASYWEAISDNARRVIPFVLMALTTPAVFYSAWPILRAAAIGLRHFTVRMEALLAVG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITAAYTYSAVQAFTGGKHYYFDTACAIITLVLLGKLLERGAKERTAKAISLLYRMMPKKA HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHH RLLIDGRETFVSIEALQSGMTFLVKAGERIPADGVVLDGISHADESVITGESAPVAKQPG EEEEECHHHHHHHHHHHCCCCEEEECCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCC DPVICGSLNTGGVLEIRATRTGAASTLSQIIRSVESAMSSRSELERTVDRASRAFAPAVI CCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIALGTFSVCSLAGMDSATALMRAIAVLVIACPCALGMATPLAITAAVGAASRRGILVSD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEC SRVLETVRKIDVAILDKTGTLTEGDFRVVATFPADSSPFLAAVSSIEQYSEHPLGRAITR HHHHHHHHHHHHEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHH RAAELGLTPHPARDIVIHKGLGISGVTAGSRVWVGNRRLMEECVGPIAPALAAASSAWQH HHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCC DGHTVAFFAFDGKVAGAIAMGDAIRADAVRLVAELKRRGIHTALISGDAHSTTAAMAAAA CCCEEEEEEECCCEECHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH GIAEFQAEVLPDDKLACVRRYQSAGKIVAMLGDGVNDAPALAGADLGIALGTGTDLAMQA HHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHH APVVLMTPALDRVLEVFDIGRDTWRVVRQNLFWAFFYNAVGITLAVAGVLTPILAAAAMV CCEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSLSVIANSLRLSAMWDRHPGDVTQRAAAVRERYPHAIERNAP HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SSCTLCGLPAGRNPLINGDQAFCCLGCLNVYSILGESGVLASGIDFRDTDLFRESLRLG CCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHH LISTGAERVKPTIPDTAEQVETVYHVSGMWCASCAWLIERALQSERGIRSAEVMFSSDLV HHHCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCE KVRYCPQYIPPARITERIAALGYRASEYSGASESDHAERKAMLLRIGVAGFLWLNVMMLS EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LVIYASYWEAISDNARRVIPFVLMALTTPAVFYSAWPILRAAAIGLRHFTVRMEALLAVG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITAAYTYSAVQAFTGGKHYYFDTACAIITLVLLGKLLERGAKERTAKAISLLYRMMPKKA HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHH RLLIDGRETFVSIEALQSGMTFLVKAGERIPADGVVLDGISHADESVITGESAPVAKQPG EEEEECHHHHHHHHHHHCCCCEEEECCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCC DPVICGSLNTGGVLEIRATRTGAASTLSQIIRSVESAMSSRSELERTVDRASRAFAPAVI CCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIALGTFSVCSLAGMDSATALMRAIAVLVIACPCALGMATPLAITAAVGAASRRGILVSD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEC SRVLETVRKIDVAILDKTGTLTEGDFRVVATFPADSSPFLAAVSSIEQYSEHPLGRAITR HHHHHHHHHHHHEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHH RAAELGLTPHPARDIVIHKGLGISGVTAGSRVWVGNRRLMEECVGPIAPALAAASSAWQH HHHHCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCC DGHTVAFFAFDGKVAGAIAMGDAIRADAVRLVAELKRRGIHTALISGDAHSTTAAMAAAA CCCEEEEEEECCCEECHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH GIAEFQAEVLPDDKLACVRRYQSAGKIVAMLGDGVNDAPALAGADLGIALGTGTDLAMQA HHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHH APVVLMTPALDRVLEVFDIGRDTWRVVRQNLFWAFFYNAVGITLAVAGVLTPILAAAAMV CCEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSLSVIANSLRLSAMWDRHPGDVTQRAAAVRERYPHAIERNAP HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA