| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622613
Identifier: 116622613
GI number: 116622613
Start: 4443412
End: 4444101
Strand: Direct
Name: 116622613
Synonym: Acid_3511
Alternate gene names: NA
Gene position: 4443412-4444101 (Clockwise)
Preceding gene: 116622612
Following gene: 116622614
Centisome position: 44.59
GC content: 69.42
Gene sequence:
>690_bases GTGACCCCGTTCGACCTCACCCTCCCGCTCGCCCTCGGCCTGGTCAGCAGCCTCCACTGCGCCCAGATGTGCGGCCCCAT CGTCCTTTCCTACAGCATGGCCGGACGCAGCACACCCGCCGGACACCTCTGCTACAACGCGGGACGCATCGCGACCTACG CACTCCTCGGCGCCGCCGCCGGCGGGCTGGGCGGCGCGATGGGCCTCCTCGGCCGCCTCGCCGGAATCCAGCAGGCTGCT TCTTTGATCGCGGGCTGCCTCATGCTGCTCGCCGGAGTCCTCCTCTCCGGTGCCGTCCCCGCCCAATCCCTTGTACGGAT CGATCGCCTCGGTCTCTCGCGCCTCTACTCGCGCACCGCCGGCAAGCTCATGCTCTCCCCTTCGCCTGTCGCCAAACTGA CTCTCGGACTGGCCCTCGGCTTCCTCCCCTGCGGCCTCCTCTACGCCGCCCTCCTCAAAGCCATGTCCACCGGATCGGCC GCGGCCGGCGCTCTCTCGATGGCGGCATTCGGCACCGGAACTGCCGGAGCACTCCTCGCCATCGGCATCTTTTCATCCAC CCTGAAACGCGGTCTCGGCCGTTGGAGCGGCGTACTCTCCGCCGCTTCCGTCGCCGCCATGGGCCTGTTCCTGATCTGGC GGGGCGTCGCTGCCCGCGTCCCCGCGATGAGTTGCCATGCCGGCGTCTAA
Upstream 100 bases:
>100_bases GCGAGTGCGTCACCGTCCCCACGGTCAACACCAAGCTCCTGCCTGGTGGGGCAGCCAATCCTGGCTGCAGCCGGCTTCCA GCCGGCTCCCGGAGCGCGAC
Downstream 100 bases:
>100_bases TTCCGGCTATCACCGCCTCCGCAAACAGGTGCACGCGGGCTGTTTCCTGATCTTTATCCTGCTCCCGTTCTTCAACGTGG TGCGCTTCGATATCCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTPFDLTLPLALGLVSSLHCAQMCGPIVLSYSMAGRSTPAGHLCYNAGRIATYALLGAAAGGLGGAMGLLGRLAGIQQAA SLIAGCLMLLAGVLLSGAVPAQSLVRIDRLGLSRLYSRTAGKLMLSPSPVAKLTLGLALGFLPCGLLYAALLKAMSTGSA AAGALSMAAFGTGTAGALLAIGIFSSTLKRGLGRWSGVLSAASVAAMGLFLIWRGVAARVPAMSCHAGV
Sequences:
>Translated_229_residues MTPFDLTLPLALGLVSSLHCAQMCGPIVLSYSMAGRSTPAGHLCYNAGRIATYALLGAAAGGLGGAMGLLGRLAGIQQAA SLIAGCLMLLAGVLLSGAVPAQSLVRIDRLGLSRLYSRTAGKLMLSPSPVAKLTLGLALGFLPCGLLYAALLKAMSTGSA AAGALSMAAFGTGTAGALLAIGIFSSTLKRGLGRWSGVLSAASVAAMGLFLIWRGVAARVPAMSCHAGV >Mature_228_residues TPFDLTLPLALGLVSSLHCAQMCGPIVLSYSMAGRSTPAGHLCYNAGRIATYALLGAAAGGLGGAMGLLGRLAGIQQAAS LIAGCLMLLAGVLLSGAVPAQSLVRIDRLGLSRLYSRTAGKLMLSPSPVAKLTLGLALGFLPCGLLYAALLKAMSTGSAA AGALSMAAFGTGTAGALLAIGIFSSTLKRGLGRWSGVLSAASVAAMGLFLIWRGVAARVPAMSCHAGV
Specific function: Unknown
COG id: COG2836
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22745; Mature: 22613
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFDLTLPLALGLVSSLHCAQMCGPIVLSYSMAGRSTPAGHLCYNAGRIATYALLGAAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHH GGLGGAMGLLGRLAGIQQAASLIAGCLMLLAGVLLSGAVPAQSLVRIDRLGLSRLYSRTA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC GKLMLSPSPVAKLTLGLALGFLPCGLLYAALLKAMSTGSAAAGALSMAAFGTGTAGALLA CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH IGIFSSTLKRGLGRWSGVLSAASVAAMGLFLIWRGVAARVPAMSCHAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure TPFDLTLPLALGLVSSLHCAQMCGPIVLSYSMAGRSTPAGHLCYNAGRIATYALLGAAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHH GGLGGAMGLLGRLAGIQQAASLIAGCLMLLAGVLLSGAVPAQSLVRIDRLGLSRLYSRTA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC GKLMLSPSPVAKLTLGLALGFLPCGLLYAALLKAMSTGSAAAGALSMAAFGTGTAGALLA CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH IGIFSSTLKRGLGRWSGVLSAASVAAMGLFLIWRGVAARVPAMSCHAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA