| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622592
Identifier: 116622592
GI number: 116622592
Start: 4413549
End: 4415663
Strand: Reverse
Name: 116622592
Synonym: Acid_3490
Alternate gene names: NA
Gene position: 4415663-4413549 (Counterclockwise)
Preceding gene: 116622593
Following gene: 116622591
Centisome position: 44.31
GC content: 63.4
Gene sequence:
>2115_bases ATGAGACATCGTGTTCTATCGTGCGCATTGCTGGCGGCGGCGGTGTTGGTTCCGCCGCGGGCGCCCGGCCAGCAGCCCGG CGTGCCCACAGTCAAGACGACGGTGGACGAAGTCCTGCTCGACCTGATCGTGCGCGATAAGAAGGGTAAGCCGGTCACGG ATCTGAGGCCCTCCGACATTACCGTTGTCGATAACGGAGCGAAACAGACACTCACCTCCTTCCGCCTGGTGACCGGCGTG GAAGCGGTGACCTCCAGCGGCGCCCGGACGGCGCTCGACCCGCTCCGCCAGCTGCGCCTGGTAACGCTCGCCTTTGAAGC CATGGGTGAGGCCGATCAACGCAAGCTCGCACGCGCCGCCGCGATCGACCTGATCAAAGGCGAGCAAGGCACTAACGTGT ATTACGCGGTGGTCGTGATCAATACGCAGCTGCTGGTGCTGCAGCAGTTCACGAACGACAAGGCGGCGCTGACGAAGGCG ATCGAGCACGCCACGGGAGGGCTCGGCGGTCCGGGCCTGGCTTCGGAATCGGACGCGATCCTGAGCCAGTTGAAACGCAA TCTGGGGAATCAGAACGGAGCCGATCAGGATGGCAACCTGCTCGCCGCGGCCAGCGCCACCGCGAGCCAACCGGTCGCGA ACGGGGCGGACGCCCTTCAGGCCAAGCTCGCGTCCGTCATGCTGGACATGCTGCGTATGGATGCCGCGGTCGGCTCGCAG GGCACGCGGCTCACGCTCTCCGCCCTGAGGGCGCTTGTGAATGGACTGAGATCCATGCCTGGCCGCAAATCGGTAGTCTA TTTCACCTGGGGCATGTATCTCACGCCGGAACTGGACGCGTCGTTTCACGGCCTGATCAGCACCGCGAACCGGGAGAACG TCACGTTCTATTCCGTGGATACGCGCGGCGTGATGACCGGGGCGCAAAACGCCGGAGCCCGCGGCCAGCTGGCGGGCGCG GCGCGCGCCAGCGCAACCACGATGACACAGACCTCGGGCGCGGTCACGAAAGACCAGGTGATGGCGTCGGACAATGCCGA AGTTGCGGCAAGGGCGAACGTCCAGGAATCACTTCGCGACCTGGCCGAATCGACAGGCGGCTTCCTGATCGGCGACAGCA ATGACCTTCGAGGTCCCCTGCACCACGTCAACGAAGAGATCAGCAGCTACTACGAAGTCTCTTTCAATCCGGGCATCCAG AATTACGACGGCAGTTTCCGAAAACTCGCGGTCAATGCCAACCGGAAGGACCTGGTAATTCATGCGCGCACCGGCTACTT CGCGCTGCCGCCCGAAGCTCGTGCCGGCGGATTGCAGCCCTTCGAAGTGCCCTTGCTGAACGTGCTGTCCGATTCCACGG TCTCCGAAGATGTCAAATTCCGCGCGGGCACCCTCTTGCTGCAGCCCAAGGCAGAGGCAACCAGCGTTTCCGTGCTTGTG GAAGTGCCGCTGCATGAGCTGCAGCCCAAAGGCGGCAGCGTGCACTGCTCGCTGGCCGCCCTGGTGAAGAACGACAAGGG CGAAGTTGTCCAGAAGCTGACCCGTGACCGCAGTTTTCAGGTGACCGCGGACCAGCTCAAGCTCGGCCACTTTCTGGACA AGATGACAGTCGCGCTGACGCCGGGGCAGTACAGCCTGGAGTCTGCCGTGATGGATCGGGAGAGCGGCAAGGTAGGGACG CAGCGCTCGCAATTCACGGTGCCCGCAGGCGTCAGGGGGGTCGGGATCTCATCGCTCACCCCGATGCGCTCCTACACACC GAATGCAAAAGGTCTCGACCCGGACGATCCCTTTCAGTTCCAGGGAGGCAGTGTCACACCCACGCTGGACCTGACGGTCA AGAAGGCGCCGAACACGGCTCTTCGACTGTTCTTCACGGTGTACCAGGACGCCTCGGTTCGCACGGCACCGACGGTAGAG ATCGAGTTCCTACAGGCCGGCAAGAGCTTGACGAAAGTCCCGATGCAACTGCCGTCGGCGGATGCTCAGGGCAGGATCCC GTACCTCATGACGATTCCCGCCGAGTCGATTCCCTCGGGGAGCTACGAGGTTCGCGCAACAGCCCGGCAGGGCGGCACGA CCGCTGCATCCGCCACGATGATTCAGATTGAGTAA
Upstream 100 bases:
>100_bases CTATTCGCGGCTGGGACGCAAGCAGGATGCAGCACGTGAGCTTGCGGAATTTAAGCGCCTGGAACAGCTCGGAAAGTAAT CGGCACTCGAGGAGGCCCTG
Downstream 100 bases:
>100_bases GTGTTTTCAGCAGCGTTAACGCGGATCCTTTGGTGTCTGTTAACGCAGACCCGAAGCGTTAACGGACTTGAACCCCGGTT CCACCGCCGTGTATACTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 704; Mature: 704
Protein sequence:
>704_residues MRHRVLSCALLAAAVLVPPRAPGQQPGVPTVKTTVDEVLLDLIVRDKKGKPVTDLRPSDITVVDNGAKQTLTSFRLVTGV EAVTSSGARTALDPLRQLRLVTLAFEAMGEADQRKLARAAAIDLIKGEQGTNVYYAVVVINTQLLVLQQFTNDKAALTKA IEHATGGLGGPGLASESDAILSQLKRNLGNQNGADQDGNLLAAASATASQPVANGADALQAKLASVMLDMLRMDAAVGSQ GTRLTLSALRALVNGLRSMPGRKSVVYFTWGMYLTPELDASFHGLISTANRENVTFYSVDTRGVMTGAQNAGARGQLAGA ARASATTMTQTSGAVTKDQVMASDNAEVAARANVQESLRDLAESTGGFLIGDSNDLRGPLHHVNEEISSYYEVSFNPGIQ NYDGSFRKLAVNANRKDLVIHARTGYFALPPEARAGGLQPFEVPLLNVLSDSTVSEDVKFRAGTLLLQPKAEATSVSVLV EVPLHELQPKGGSVHCSLAALVKNDKGEVVQKLTRDRSFQVTADQLKLGHFLDKMTVALTPGQYSLESAVMDRESGKVGT QRSQFTVPAGVRGVGISSLTPMRSYTPNAKGLDPDDPFQFQGGSVTPTLDLTVKKAPNTALRLFFTVYQDASVRTAPTVE IEFLQAGKSLTKVPMQLPSADAQGRIPYLMTIPAESIPSGSYEVRATARQGGTTAASATMIQIE
Sequences:
>Translated_704_residues MRHRVLSCALLAAAVLVPPRAPGQQPGVPTVKTTVDEVLLDLIVRDKKGKPVTDLRPSDITVVDNGAKQTLTSFRLVTGV EAVTSSGARTALDPLRQLRLVTLAFEAMGEADQRKLARAAAIDLIKGEQGTNVYYAVVVINTQLLVLQQFTNDKAALTKA IEHATGGLGGPGLASESDAILSQLKRNLGNQNGADQDGNLLAAASATASQPVANGADALQAKLASVMLDMLRMDAAVGSQ GTRLTLSALRALVNGLRSMPGRKSVVYFTWGMYLTPELDASFHGLISTANRENVTFYSVDTRGVMTGAQNAGARGQLAGA ARASATTMTQTSGAVTKDQVMASDNAEVAARANVQESLRDLAESTGGFLIGDSNDLRGPLHHVNEEISSYYEVSFNPGIQ NYDGSFRKLAVNANRKDLVIHARTGYFALPPEARAGGLQPFEVPLLNVLSDSTVSEDVKFRAGTLLLQPKAEATSVSVLV EVPLHELQPKGGSVHCSLAALVKNDKGEVVQKLTRDRSFQVTADQLKLGHFLDKMTVALTPGQYSLESAVMDRESGKVGT QRSQFTVPAGVRGVGISSLTPMRSYTPNAKGLDPDDPFQFQGGSVTPTLDLTVKKAPNTALRLFFTVYQDASVRTAPTVE IEFLQAGKSLTKVPMQLPSADAQGRIPYLMTIPAESIPSGSYEVRATARQGGTTAASATMIQIE >Mature_704_residues MRHRVLSCALLAAAVLVPPRAPGQQPGVPTVKTTVDEVLLDLIVRDKKGKPVTDLRPSDITVVDNGAKQTLTSFRLVTGV EAVTSSGARTALDPLRQLRLVTLAFEAMGEADQRKLARAAAIDLIKGEQGTNVYYAVVVINTQLLVLQQFTNDKAALTKA IEHATGGLGGPGLASESDAILSQLKRNLGNQNGADQDGNLLAAASATASQPVANGADALQAKLASVMLDMLRMDAAVGSQ GTRLTLSALRALVNGLRSMPGRKSVVYFTWGMYLTPELDASFHGLISTANRENVTFYSVDTRGVMTGAQNAGARGQLAGA ARASATTMTQTSGAVTKDQVMASDNAEVAARANVQESLRDLAESTGGFLIGDSNDLRGPLHHVNEEISSYYEVSFNPGIQ NYDGSFRKLAVNANRKDLVIHARTGYFALPPEARAGGLQPFEVPLLNVLSDSTVSEDVKFRAGTLLLQPKAEATSVSVLV EVPLHELQPKGGSVHCSLAALVKNDKGEVVQKLTRDRSFQVTADQLKLGHFLDKMTVALTPGQYSLESAVMDRESGKVGT QRSQFTVPAGVRGVGISSLTPMRSYTPNAKGLDPDDPFQFQGGSVTPTLDLTVKKAPNTALRLFFTVYQDASVRTAPTVE IEFLQAGKSLTKVPMQLPSADAQGRIPYLMTIPAESIPSGSYEVRATARQGGTTAASATMIQIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74667; Mature: 74667
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHRVLSCALLAAAVLVPPRAPGQQPGVPTVKTTVDEVLLDLIVRDKKGKPVTDLRPSDI CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE TVVDNGAKQTLTSFRLVTGVEAVTSSGARTALDPLRQLRLVTLAFEAMGEADQRKLARAA EEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AIDLIKGEQGTNVYYAVVVINTQLLVLQQFTNDKAALTKAIEHATGGLGGPGLASESDAI HHHHEECCCCCCEEEEEEEECCEEEEEEHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHH LSQLKRNLGNQNGADQDGNLLAAASATASQPVANGADALQAKLASVMLDMLRMDAAVGSQ HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC GTRLTLSALRALVNGLRSMPGRKSVVYFTWGMYLTPELDASFHGLISTANRENVTFYSVD CCEEHHHHHHHHHHHHHCCCCCCEEEEEEECEEECCCCCCCHHHHEEECCCCCEEEEEEC TRGVMTGAQNAGARGQLAGAARASATTMTQTSGAVTKDQVMASDNAEVAARANVQESLRD CCEEECCCCCCCCCCCCCCCHHCCCCEEECCCCCCCHHHEEECCCCCEEECCCHHHHHHH LAESTGGFLIGDSNDLRGPLHHVNEEISSYYEVSFNPGIQNYDGSFRKLAVNANRKDLVI HHHHCCCEEEECCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCCCEEEEEECCCCCEEEE HARTGYFALPPEARAGGLQPFEVPLLNVLSDSTVSEDVKFRAGTLLLQPKAEATSVSVLV EECCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCEEEECCCCCCCEEEEEE EVPLHELQPKGGSVHCSLAALVKNDKGEVVQKLTRDRSFQVTADQLKLGHFLDKMTVALT ECCHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCEEEEEC PGQYSLESAVMDRESGKVGTQRSQFTVPAGVRGVGISSLTPMRSYTPNAKGLDPDDPFQF CCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE QGGSVTPTLDLTVKKAPNTALRLFFTVYQDASVRTAPTVEIEFLQAGKSLTKVPMQLPSA CCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCHHHHCCCCCCCC DAQGRIPYLMTIPAESIPSGSYEVRATARQGGTTAASATMIQIE CCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEC >Mature Secondary Structure MRHRVLSCALLAAAVLVPPRAPGQQPGVPTVKTTVDEVLLDLIVRDKKGKPVTDLRPSDI CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE TVVDNGAKQTLTSFRLVTGVEAVTSSGARTALDPLRQLRLVTLAFEAMGEADQRKLARAA EEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AIDLIKGEQGTNVYYAVVVINTQLLVLQQFTNDKAALTKAIEHATGGLGGPGLASESDAI HHHHEECCCCCCEEEEEEEECCEEEEEEHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHH LSQLKRNLGNQNGADQDGNLLAAASATASQPVANGADALQAKLASVMLDMLRMDAAVGSQ HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC GTRLTLSALRALVNGLRSMPGRKSVVYFTWGMYLTPELDASFHGLISTANRENVTFYSVD CCEEHHHHHHHHHHHHHCCCCCCEEEEEEECEEECCCCCCCHHHHEEECCCCCEEEEEEC TRGVMTGAQNAGARGQLAGAARASATTMTQTSGAVTKDQVMASDNAEVAARANVQESLRD CCEEECCCCCCCCCCCCCCCHHCCCCEEECCCCCCCHHHEEECCCCCEEECCCHHHHHHH LAESTGGFLIGDSNDLRGPLHHVNEEISSYYEVSFNPGIQNYDGSFRKLAVNANRKDLVI HHHHCCCEEEECCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCCCEEEEEECCCCCEEEE HARTGYFALPPEARAGGLQPFEVPLLNVLSDSTVSEDVKFRAGTLLLQPKAEATSVSVLV EECCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCEEEECCCCCCCEEEEEE EVPLHELQPKGGSVHCSLAALVKNDKGEVVQKLTRDRSFQVTADQLKLGHFLDKMTVALT ECCHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHCCCCEEEEHHHHHHHHHHHCEEEEEC PGQYSLESAVMDRESGKVGTQRSQFTVPAGVRGVGISSLTPMRSYTPNAKGLDPDDPFQF CCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE QGGSVTPTLDLTVKKAPNTALRLFFTVYQDASVRTAPTVEIEFLQAGKSLTKVPMQLPSA CCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCHHHHCCCCCCCC DAQGRIPYLMTIPAESIPSGSYEVRATARQGGTTAASATMIQIE CCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA