| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622492
Identifier: 116622492
GI number: 116622492
Start: 4293636
End: 4295141
Strand: Direct
Name: 116622492
Synonym: Acid_3390
Alternate gene names: NA
Gene position: 4293636-4295141 (Clockwise)
Preceding gene: 116622489
Following gene: 116622493
Centisome position: 43.08
GC content: 64.48
Gene sequence:
>1506_bases ATGCTGGTCCAGGTGATCGCCCACGCCAGGCGCCGTCTGTGGTGGAATGCGCTGCTGTTTCAATTGACTGTTGCTGCGAC CGTGGGATTGCTCGTGCTCGTGCTAATGCTGCTCCTGGGGACCGACGTGATCGCCGCCCGGTGGCCGGTTCTCCTGCCCT TAACCTGTCTGGCAGCGGGCATCTGGTTGGCTTGGCGGCGCCTGCCGGCATTCTCTCCCACCGCGGAGTTCCTGGACCGC CGCTTGAAGCTTCCGGATACCCTGGCGACGGCGCTGTTCTTTTCAAGCCCTCATCCGGAGCGTAGTTGCGGGGAGGAATT TCCGCTCGCGCTGCGCACGCAGGCCGCGCGCATCGCGGAGGGCGTGAATCTCCGAGAGGTGGTGCCGGTGAAAATGCCGC GCTCCGTTCTCTTCCCGGCCTTGCTGGCGGTTGCCGCGGCGTCCCTGTTCGTGGTGCGCTACCAATCCGCCGCGCGGCTC GATCTCAAGGAGCCGATGGGGATCATGCTGCGGCAACTGATGGAAGGCGCGCGGAGTGAAGTGGCCCGGCTTGTGGAGGA ATTAAAGCCGGCCAGAATTTTGGAACGGATGAAGGGCGAAGAGGCCCGGAAGAGTACGCCCTCTCCGGATGGCGAGAGCG CGGATGGCAAACCGCCTGGCCCAGGCGACTCGAACTCCTCCGAGCGAGGTTCTGCGGCGACGGCGGAGCAGGAGAAGCCG AAGCCCGATACCTTTGCGGGCGAGCGGGAGCCCAGGGAAGGCGAGCCCAAGCAGGGGGATCAGGTCGCCGCCGACTCGCA ATCCGGGGCGGCGCGGAGTGGCACTGAGCGGCAGGGAAAAGAGGGTTCCCAGCAGCAGCAGCAGCAACAGCAGGGCGCCG GGAACCAGACGGCATCTTCCAGCGGCGGCTCGGGCATGGTGAACAAAGTCAAAGACGCTCTGGCGAACCTGATGTCCGCG CTGAAGCCGCCTTCGGGCGCGGCCGGAGGCCAGCAGGCGATGAACGGACAAGACAACCGCGCATCCGGCAACAACCAGAA AAAAGGCGCGGCCGATGCCGGCTCCGCGAGCGGGGAAAAGGGCGAAGGGGAATCGTCGAAACCGGGGAATGCGATGGCGG GCGGCGCCGGCCAGTCGGGCGAATCGCAAGCCGAGAAATTGCAAGGCACAGGCGCCGGAAACAACGAGGGCTCGAAGGAA ATCCGCACCGCCGAACAACTGGAAGCGATGGGAAAGCTTGACCGGGTATTCGGCAAACGGGCCGAAAACGTCAGCGGAGA AATGACCGTGCAGGCCCCGCCCGGACCACAGAATTTGAGGACACCGTACGCGCAGCGGGAAGCGGAGCATTCTTCCGTGG AAACCACCGCGATGCGCGATGAGGTGCCGGTTGCATTTCAGGATTACGTACAGCACTACTACGACCTGCTGAGGCGGGAA GAGGCGTCAACGAGACGCCAGGGACGAGTAATGGCAACTGCCCGGAAGTCCCGAACTGTCAGATAA
Upstream 100 bases:
>100_bases GACTAACATTCGCCGGCCGCTAAGAGCCGCTTAACCCTTTGCACAGGAAATAGTGGGCCATTCACCCGTGTCTTCCATCA AGTTCTGCAGGTGGTGAGAG
Downstream 100 bases:
>100_bases AGACCTGAGGGTGGGTACCGATAATCGCCATTTTATTGGGACTCATGCCTCTATTTTGCATCGAGGTTAACGTGAGGAGA GAACTGCTAGGCCCGCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MLVQVIAHARRRLWWNALLFQLTVAATVGLLVLVLMLLLGTDVIAARWPVLLPLTCLAAGIWLAWRRLPAFSPTAEFLDR RLKLPDTLATALFFSSPHPERSCGEEFPLALRTQAARIAEGVNLREVVPVKMPRSVLFPALLAVAAASLFVVRYQSAARL DLKEPMGIMLRQLMEGARSEVARLVEELKPARILERMKGEEARKSTPSPDGESADGKPPGPGDSNSSERGSAATAEQEKP KPDTFAGEREPREGEPKQGDQVAADSQSGAARSGTERQGKEGSQQQQQQQQGAGNQTASSSGGSGMVNKVKDALANLMSA LKPPSGAAGGQQAMNGQDNRASGNNQKKGAADAGSASGEKGEGESSKPGNAMAGGAGQSGESQAEKLQGTGAGNNEGSKE IRTAEQLEAMGKLDRVFGKRAENVSGEMTVQAPPGPQNLRTPYAQREAEHSSVETTAMRDEVPVAFQDYVQHYYDLLRRE EASTRRQGRVMATARKSRTVR
Sequences:
>Translated_501_residues MLVQVIAHARRRLWWNALLFQLTVAATVGLLVLVLMLLLGTDVIAARWPVLLPLTCLAAGIWLAWRRLPAFSPTAEFLDR RLKLPDTLATALFFSSPHPERSCGEEFPLALRTQAARIAEGVNLREVVPVKMPRSVLFPALLAVAAASLFVVRYQSAARL DLKEPMGIMLRQLMEGARSEVARLVEELKPARILERMKGEEARKSTPSPDGESADGKPPGPGDSNSSERGSAATAEQEKP KPDTFAGEREPREGEPKQGDQVAADSQSGAARSGTERQGKEGSQQQQQQQQGAGNQTASSSGGSGMVNKVKDALANLMSA LKPPSGAAGGQQAMNGQDNRASGNNQKKGAADAGSASGEKGEGESSKPGNAMAGGAGQSGESQAEKLQGTGAGNNEGSKE IRTAEQLEAMGKLDRVFGKRAENVSGEMTVQAPPGPQNLRTPYAQREAEHSSVETTAMRDEVPVAFQDYVQHYYDLLRRE EASTRRQGRVMATARKSRTVR >Mature_501_residues MLVQVIAHARRRLWWNALLFQLTVAATVGLLVLVLMLLLGTDVIAARWPVLLPLTCLAAGIWLAWRRLPAFSPTAEFLDR RLKLPDTLATALFFSSPHPERSCGEEFPLALRTQAARIAEGVNLREVVPVKMPRSVLFPALLAVAAASLFVVRYQSAARL DLKEPMGIMLRQLMEGARSEVARLVEELKPARILERMKGEEARKSTPSPDGESADGKPPGPGDSNSSERGSAATAEQEKP KPDTFAGEREPREGEPKQGDQVAADSQSGAARSGTERQGKEGSQQQQQQQQGAGNQTASSSGGSGMVNKVKDALANLMSA LKPPSGAAGGQQAMNGQDNRASGNNQKKGAADAGSASGEKGEGESSKPGNAMAGGAGQSGESQAEKLQGTGAGNNEGSKE IRTAEQLEAMGKLDRVFGKRAENVSGEMTVQAPPGPQNLRTPYAQREAEHSSVETTAMRDEVPVAFQDYVQHYYDLLRRE EASTRRQGRVMATARKSRTVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53625; Mature: 53625
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVQVIAHARRRLWWNALLFQLTVAATVGLLVLVLMLLLGTDVIAARWPVLLPLTCLAAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHH IWLAWRRLPAFSPTAEFLDRRLKLPDTLATALFFSSPHPERSCGEEFPLALRTQAARIAE HHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHH GVNLREVVPVKMPRSVLFPALLAVAAASLFVVRYQSAARLDLKEPMGIMLRQLMEGARSE CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VARLVEELKPARILERMKGEEARKSTPSPDGESADGKPPGPGDSNSSERGSAATAEQEKP HHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KPDTFAGEREPREGEPKQGDQVAADSQSGAARSGTERQGKEGSQQQQQQQQGAGNQTASS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC SGGSGMVNKVKDALANLMSALKPPSGAAGGQQAMNGQDNRASGNNQKKGAADAGSASGEK CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GEGESSKPGNAMAGGAGQSGESQAEKLQGTGAGNNEGSKEIRTAEQLEAMGKLDRVFGKR CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AENVSGEMTVQAPPGPQNLRTPYAQREAEHSSVETTAMRDEVPVAFQDYVQHYYDLLRRE HCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH EASTRRQGRVMATARKSRTVR HHHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure MLVQVIAHARRRLWWNALLFQLTVAATVGLLVLVLMLLLGTDVIAARWPVLLPLTCLAAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHH IWLAWRRLPAFSPTAEFLDRRLKLPDTLATALFFSSPHPERSCGEEFPLALRTQAARIAE HHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHH GVNLREVVPVKMPRSVLFPALLAVAAASLFVVRYQSAARLDLKEPMGIMLRQLMEGARSE CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VARLVEELKPARILERMKGEEARKSTPSPDGESADGKPPGPGDSNSSERGSAATAEQEKP HHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KPDTFAGEREPREGEPKQGDQVAADSQSGAARSGTERQGKEGSQQQQQQQQGAGNQTASS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC SGGSGMVNKVKDALANLMSALKPPSGAAGGQQAMNGQDNRASGNNQKKGAADAGSASGEK CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC GEGESSKPGNAMAGGAGQSGESQAEKLQGTGAGNNEGSKEIRTAEQLEAMGKLDRVFGKR CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AENVSGEMTVQAPPGPQNLRTPYAQREAEHSSVETTAMRDEVPVAFQDYVQHYYDLLRRE HCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH EASTRRQGRVMATARKSRTVR HHHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA