| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622489
Identifier: 116622489
GI number: 116622489
Start: 4289801
End: 4290295
Strand: Direct
Name: 116622489
Synonym: Acid_3387
Alternate gene names: NA
Gene position: 4289801-4290295 (Clockwise)
Preceding gene: 116622488
Following gene: 116622492
Centisome position: 43.05
GC content: 61.82
Gene sequence:
>495_bases ATGCAGCCTGCCCATTTAGCCGTATCGCCGTTCATGGATAGCCTGGTAGACTGGCGCTCGGACTGGGCCTGGGGACTCCC GCTGATCGTGTTCACGGTGGTCATTCACGTATGCGGCCTGCTCATCATCAGCGACAGAGTCGATCGCGTCCACAACGCGA TGGCCGCGCGTTATAGCGACAACGTTCTGTTCGTCATGGTGATCGCGGTGACCACCTTGCTTGCTACCGGCCTGCACTGG TTCGAAGCAATGATCTGGGCCACGGCTTTCGTGAGGTTGGGCGCGCTGAACGATGACAGCACCGCGGTGCTCTACTCGCT GAGCGCGATGACAACCTACGGTCACGCGGACCTGTATCTGTCGCGGCGCTGGCAGCTCTTGGGAGCCATGGAGGCCCTGA ACGGAATGCTGCTCTTCGGCCTCACCACGGCCGTCCTGTTCGGCATCATTCAACAGGCGCGGCAGGTCCGGAGCGCGAAA CGGCGGCGTGGCTAA
Upstream 100 bases:
>100_bases CGGTTGTACTGGCCGAAGGAGACGCCGCCCTCGATCCTGGATGGGACCTGGAATCCGCCCGCGGTCCAAAGAGCGAATTG AACATCACTTGAAGTAAGCG
Downstream 100 bases:
>100_bases CGGGCGCGGGAGGCGCTGCCCCGCGATGTGCCGCGTGCCTGAAAGTAAGCCACGGCGCTTTGGTATTTCGGATCCTGCGG GTTCAGCTCGACGGCCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MQPAHLAVSPFMDSLVDWRSDWAWGLPLIVFTVVIHVCGLLIISDRVDRVHNAMAARYSDNVLFVMVIAVTTLLATGLHW FEAMIWATAFVRLGALNDDSTAVLYSLSAMTTYGHADLYLSRRWQLLGAMEALNGMLLFGLTTAVLFGIIQQARQVRSAK RRRG
Sequences:
>Translated_164_residues MQPAHLAVSPFMDSLVDWRSDWAWGLPLIVFTVVIHVCGLLIISDRVDRVHNAMAARYSDNVLFVMVIAVTTLLATGLHW FEAMIWATAFVRLGALNDDSTAVLYSLSAMTTYGHADLYLSRRWQLLGAMEALNGMLLFGLTTAVLFGIIQQARQVRSAK RRRG >Mature_164_residues MQPAHLAVSPFMDSLVDWRSDWAWGLPLIVFTVVIHVCGLLIISDRVDRVHNAMAARYSDNVLFVMVIAVTTLLATGLHW FEAMIWATAFVRLGALNDDSTAVLYSLSAMTTYGHADLYLSRRWQLLGAMEALNGMLLFGLTTAVLFGIIQQARQVRSAK RRRG
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18310; Mature: 18310
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPAHLAVSPFMDSLVDWRSDWAWGLPLIVFTVVIHVCGLLIISDRVDRVHNAMAARYSD CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NVLFVMVIAVTTLLATGLHWFEAMIWATAFVRLGALNDDSTAVLYSLSAMTTYGHADLYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHH SRRWQLLGAMEALNGMLLFGLTTAVLFGIIQQARQVRSAKRRRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQPAHLAVSPFMDSLVDWRSDWAWGLPLIVFTVVIHVCGLLIISDRVDRVHNAMAARYSD CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NVLFVMVIAVTTLLATGLHWFEAMIWATAFVRLGALNDDSTAVLYSLSAMTTYGHADLYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHH SRRWQLLGAMEALNGMLLFGLTTAVLFGIIQQARQVRSAKRRRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA