| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622488
Identifier: 116622488
GI number: 116622488
Start: 4288357
End: 4289781
Strand: Direct
Name: 116622488
Synonym: Acid_3386
Alternate gene names: NA
Gene position: 4288357-4289781 (Clockwise)
Preceding gene: 116622487
Following gene: 116622489
Centisome position: 43.03
GC content: 60.28
Gene sequence:
>1425_bases ATGAAGACGCGAATCGTGCCGGCAGTCGCTGTTGTCGCTATTTGCATCATGCTCGCGGCGTGCAGTAAGTCGGAGGCGGC CGGCGACATCGGCGTGGTGAAGGCGCAAGAGGCGCGGCAGATCGCCACAGACGCGTATATCTTTGGCTATCCGCTGGTGA CGATGGAGATGACCCGGCGAGTCATGACCAATACCGCGAAGCCGGATGGGACACATGCGCCGATGGGTCAGTTTGCCAAC GCGAGAACTTACCCGGACTCGAGTTTCCGCGATGTCACCGCGCCGAATGCCGATACTCTGTACTCGATTGCGTGGCTGGA ACTGTCGCACGAGCCCTATATCTTCAGCATCCCTGACAGCAACGGCCGGTATTATCTGATGCCGGTGCTGGATGCCTTCT CGAACGTATTCCAGTCTCCCGGCAAGCGCACCACCGGAACCAAGGCGCAAAGATACGCGCTGACCAGCCCTGGGTGGAAA GGCAGGCTGCCCGCCGGAATTACGCAGTACAAATCGCCCACTAACCTCGTGTGGATCCTGGGGCGGACCTATTGCACCGG CACGCCGCAGGATTACAAAGAGGTCCACGCCTTTCAGGATCAACTCTCGCTGGTGCCGCTGAGCGCCTATGGCAAAACCT ACAGAGCGCGCGACGGCGCCGTGAATCCGAAAATCGACAAACACACGGCGATCCGGGAACAGGTCAGCCGGATGGACGGA GCCGTGTTCTTCAAGCTGATGATGGAACTGATGAAACAGAATCCACCTGTGCCCGCGGACGCGCCGATCGTGAACCGGAT GGGGAAGATCGGGCTCGTTCCCGGCGAGGATTTCGATATCGGCAAGTACGAAGCGGGCGTGGCGGCGGCGATCAAGGACA TTCCAAAGACGGCGCTGGCCAAGATCGTGGCCCACCGGGACGCAATCGGCTACATGAAAAATGGTTGGGTCATTTCCAAG CGGGGCGGCATATACGGTACGGATTATCTGCTGCGCGCCACTTTCGCGTACTTCGGGCTCGGCGCGAACCGGCCCCTGGA CGCGATCTATCCTATGGCCGAGACCGACGCGGATGGAGGGGCTTTCAACGGCGCCAAGAAGTACGTGATGCACTTCGACA GGGGCGAATTGCCGCCGGTGAACGCGTTCTGGTCCCTCACCATGTACAACGGCGAGATGTTCTTTGTGGCGAATCCGCTG AACCGCTACACGCTCAGCCAGCGCGACAAACTGAAGTTCAATCCGGATGGCTCGGTGGACTTCTATGTACAGGCCGGTAA TCCGGGCCGCGAGAAGGAGGCCAACTGGCTGCCGGCGCCGCGGGACAAGTTCGTGCTGATGATGCGGTTGTACTGGCCGA AGGAGACGCCGCCCTCGATCCTGGATGGGACCTGGAATCCGCCCGCGGTCCAAAGAGCGAATTGA
Upstream 100 bases:
>100_bases TCAATCCCGTAGGAGAAGTGTCAAAGCTTGCAGATATCCCGGATTTTGCATCCCGCCCTCGCCGATCGGAATCATTCCGG CAGTGCGAGGAGTACCGCCT
Downstream 100 bases:
>100_bases ACATCACTTGAAGTAAGCGATGCAGCCTGCCCATTTAGCCGTATCGCCGTTCATGGATAGCCTGGTAGACTGGCGCTCGG ACTGGGCCTGGGGACTCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MKTRIVPAVAVVAICIMLAACSKSEAAGDIGVVKAQEARQIATDAYIFGYPLVTMEMTRRVMTNTAKPDGTHAPMGQFAN ARTYPDSSFRDVTAPNADTLYSIAWLELSHEPYIFSIPDSNGRYYLMPVLDAFSNVFQSPGKRTTGTKAQRYALTSPGWK GRLPAGITQYKSPTNLVWILGRTYCTGTPQDYKEVHAFQDQLSLVPLSAYGKTYRARDGAVNPKIDKHTAIREQVSRMDG AVFFKLMMELMKQNPPVPADAPIVNRMGKIGLVPGEDFDIGKYEAGVAAAIKDIPKTALAKIVAHRDAIGYMKNGWVISK RGGIYGTDYLLRATFAYFGLGANRPLDAIYPMAETDADGGAFNGAKKYVMHFDRGELPPVNAFWSLTMYNGEMFFVANPL NRYTLSQRDKLKFNPDGSVDFYVQAGNPGREKEANWLPAPRDKFVLMMRLYWPKETPPSILDGTWNPPAVQRAN
Sequences:
>Translated_474_residues MKTRIVPAVAVVAICIMLAACSKSEAAGDIGVVKAQEARQIATDAYIFGYPLVTMEMTRRVMTNTAKPDGTHAPMGQFAN ARTYPDSSFRDVTAPNADTLYSIAWLELSHEPYIFSIPDSNGRYYLMPVLDAFSNVFQSPGKRTTGTKAQRYALTSPGWK GRLPAGITQYKSPTNLVWILGRTYCTGTPQDYKEVHAFQDQLSLVPLSAYGKTYRARDGAVNPKIDKHTAIREQVSRMDG AVFFKLMMELMKQNPPVPADAPIVNRMGKIGLVPGEDFDIGKYEAGVAAAIKDIPKTALAKIVAHRDAIGYMKNGWVISK RGGIYGTDYLLRATFAYFGLGANRPLDAIYPMAETDADGGAFNGAKKYVMHFDRGELPPVNAFWSLTMYNGEMFFVANPL NRYTLSQRDKLKFNPDGSVDFYVQAGNPGREKEANWLPAPRDKFVLMMRLYWPKETPPSILDGTWNPPAVQRAN >Mature_474_residues MKTRIVPAVAVVAICIMLAACSKSEAAGDIGVVKAQEARQIATDAYIFGYPLVTMEMTRRVMTNTAKPDGTHAPMGQFAN ARTYPDSSFRDVTAPNADTLYSIAWLELSHEPYIFSIPDSNGRYYLMPVLDAFSNVFQSPGKRTTGTKAQRYALTSPGWK GRLPAGITQYKSPTNLVWILGRTYCTGTPQDYKEVHAFQDQLSLVPLSAYGKTYRARDGAVNPKIDKHTAIREQVSRMDG AVFFKLMMELMKQNPPVPADAPIVNRMGKIGLVPGEDFDIGKYEAGVAAAIKDIPKTALAKIVAHRDAIGYMKNGWVISK RGGIYGTDYLLRATFAYFGLGANRPLDAIYPMAETDADGGAFNGAKKYVMHFDRGELPPVNAFWSLTMYNGEMFFVANPL NRYTLSQRDKLKFNPDGSVDFYVQAGNPGREKEANWLPAPRDKFVLMMRLYWPKETPPSILDGTWNPPAVQRAN
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52523; Mature: 52523
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRIVPAVAVVAICIMLAACSKSEAAGDIGVVKAQEARQIATDAYIFGYPLVTMEMTRR CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHCEEEECCCHHHHHHHHH VMTNTAKPDGTHAPMGQFANARTYPDSSFRDVTAPNADTLYSIAWLELSHEPYIFSIPDS HHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCC NGRYYLMPVLDAFSNVFQSPGKRTTGTKAQRYALTSPGWKGRLPAGITQYKSPTNLVWIL CCCEEEEHHHHHHHHHHHCCCCCCCCCCHHEEEECCCCCCCCCCCCHHHCCCCCCEEEEE GRTYCTGTPQDYKEVHAFQDQLSLVPLSAYGKTYRARDGAVNPKIDKHTAIREQVSRMDG ECEEECCCCHHHHHHHHHHHHHCEEEEHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH AVFFKLMMELMKQNPPVPADAPIVNRMGKIGLVPGEDFDIGKYEAGVAAAIKDIPKTALA HHHHHHHHHHHHCCCCCCCCCHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHCCHHHHH KIVAHRDAIGYMKNGWVISKRGGIYGTDYLLRATFAYFGLGANRPLDAIYPMAETDADGG HHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCC AFNGAKKYVMHFDRGELPPVNAFWSLTMYNGEMFFVANPLNRYTLSQRDKLKFNPDGSVD CCCCHHHEEEEECCCCCCCCCEEEEEEEECCEEEEEECCHHHCCCCCCCCEEECCCCCEE FYVQAGNPGREKEANWLPAPRDKFVLMMRLYWPKETPPSILDGTWNPPAVQRAN EEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure MKTRIVPAVAVVAICIMLAACSKSEAAGDIGVVKAQEARQIATDAYIFGYPLVTMEMTRR CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHCEEEECCCHHHHHHHHH VMTNTAKPDGTHAPMGQFANARTYPDSSFRDVTAPNADTLYSIAWLELSHEPYIFSIPDS HHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCC NGRYYLMPVLDAFSNVFQSPGKRTTGTKAQRYALTSPGWKGRLPAGITQYKSPTNLVWIL CCCEEEEHHHHHHHHHHHCCCCCCCCCCHHEEEECCCCCCCCCCCCHHHCCCCCCEEEEE GRTYCTGTPQDYKEVHAFQDQLSLVPLSAYGKTYRARDGAVNPKIDKHTAIREQVSRMDG ECEEECCCCHHHHHHHHHHHHHCEEEEHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHH AVFFKLMMELMKQNPPVPADAPIVNRMGKIGLVPGEDFDIGKYEAGVAAAIKDIPKTALA HHHHHHHHHHHHCCCCCCCCCHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHCCHHHHH KIVAHRDAIGYMKNGWVISKRGGIYGTDYLLRATFAYFGLGANRPLDAIYPMAETDADGG HHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCC AFNGAKKYVMHFDRGELPPVNAFWSLTMYNGEMFFVANPLNRYTLSQRDKLKFNPDGSVD CCCCHHHEEEEECCCCCCCCCEEEEEEEECCEEEEEECCHHHCCCCCCCCEEECCCCCEE FYVQAGNPGREKEANWLPAPRDKFVLMMRLYWPKETPPSILDGTWNPPAVQRAN EEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA