| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622487
Identifier: 116622487
GI number: 116622487
Start: 4287317
End: 4287991
Strand: Direct
Name: 116622487
Synonym: Acid_3385
Alternate gene names: NA
Gene position: 4287317-4287991 (Clockwise)
Preceding gene: 116622482
Following gene: 116622488
Centisome position: 43.02
GC content: 62.07
Gene sequence:
>675_bases ATGCGCCTGCGCCTTGTGCCGCGCATCCGCCGAACCATGCGCATTGCAACGTATATTGCCCTGGCCGCCTCGGCCTTTTC TCCGCTGTGCGTGGCGCAACAATGGGAACTCGGTGCGACCGGCGGATACGGATTTTACGTCAACCCCACAATTACGGGTA ATTCCGGATCGGCGGAGCCGGGATTCGCCCCCAAGGGAGTGATCGGCGTGGTGTTCGGCCAGGACATGTACGAACACGTC GGCGGTGAGATCCGCTGGCTCTATCAGTACGGCGGCCCGCAGCTGAAGTCCGGCGGCGTGCTGACTAGTGCGACGGGCTA CTCGAACGCGGTGACTTACGACGTGCTGTTCCACACCGCGGGCCGGGAGGCAAACCTCCGCCCGTACTTCTCCGCCGGAG CGGGAATCAAGGTTTACACCAGCAGTGAGCTGAGATTCCTGGGGCCCCCGCCGACGAGCCCCGCGGTGTTGCTGCACAGG ACCCAAGTGGAGCCCGCGATCAGCGCCGGAGCCGGATTGAAGTATCGAGTGACGCATCGGATGTTAGTCAGACTGGACTT TCGGACTTACTTCAGCCCGGCCCCGGATGAAATCTTTCGCCCGCTAGGACAGGCAAGAATCCGCGGCTGGATCTATAACT TTGCGCCCTTGGGCGGTGTCAGCCTGGTATTTTGA
Upstream 100 bases:
>100_bases TCGACGCCTGTAGGGCCTTTCAGCGCCATAGTTTGGGGATACACTCAGGAAACCGCGAGAGCAACAAAACGTCCATCCAG CGGACGCGCATGGCAAAATA
Downstream 100 bases:
>100_bases GATGCCGTGTTCGCGGGAGTCCCTTCGCTCCTGGCGGCTTGCGTGTGCCGCTGTGGACCCCCGCCCCCCCGGGCAGCGCG GCAAAGCCTCACCGCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MRLRLVPRIRRTMRIATYIALAASAFSPLCVAQQWELGATGGYGFYVNPTITGNSGSAEPGFAPKGVIGVVFGQDMYEHV GGEIRWLYQYGGPQLKSGGVLTSATGYSNAVTYDVLFHTAGREANLRPYFSAGAGIKVYTSSELRFLGPPPTSPAVLLHR TQVEPAISAGAGLKYRVTHRMLVRLDFRTYFSPAPDEIFRPLGQARIRGWIYNFAPLGGVSLVF
Sequences:
>Translated_224_residues MRLRLVPRIRRTMRIATYIALAASAFSPLCVAQQWELGATGGYGFYVNPTITGNSGSAEPGFAPKGVIGVVFGQDMYEHV GGEIRWLYQYGGPQLKSGGVLTSATGYSNAVTYDVLFHTAGREANLRPYFSAGAGIKVYTSSELRFLGPPPTSPAVLLHR TQVEPAISAGAGLKYRVTHRMLVRLDFRTYFSPAPDEIFRPLGQARIRGWIYNFAPLGGVSLVF >Mature_224_residues MRLRLVPRIRRTMRIATYIALAASAFSPLCVAQQWELGATGGYGFYVNPTITGNSGSAEPGFAPKGVIGVVFGQDMYEHV GGEIRWLYQYGGPQLKSGGVLTSATGYSNAVTYDVLFHTAGREANLRPYFSAGAGIKVYTSSELRFLGPPPTSPAVLLHR TQVEPAISAGAGLKYRVTHRMLVRLDFRTYFSPAPDEIFRPLGQARIRGWIYNFAPLGGVSLVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24411; Mature: 24411
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRLVPRIRRTMRIATYIALAASAFSPLCVAQQWELGATGGYGFYVNPTITGNSGSAEP CCEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCEEECCCCCCCC GFAPKGVIGVVFGQDMYEHVGGEIRWLYQYGGPQLKSGGVLTSATGYSNAVTYDVLFHTA CCCCCCEEEEEECCHHHHHCCCEEEEEEECCCCEECCCCEEEECCCCCCEEEEEEEEEEC GREANLRPYFSAGAGIKVYTSSELRFLGPPPTSPAVLLHRTQVEPAISAGAGLKYRVTHR CCCCCCCEEECCCCCEEEEECCCEEEECCCCCCCEEEEEECCCCCHHHCCCCEEEEEEEE MLVRLDFRTYFSPAPDEIFRPLGQARIRGWIYNFAPLGGVSLVF EEEEEEHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCEEEEC >Mature Secondary Structure MRLRLVPRIRRTMRIATYIALAASAFSPLCVAQQWELGATGGYGFYVNPTITGNSGSAEP CCEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCEEECCCCCCCC GFAPKGVIGVVFGQDMYEHVGGEIRWLYQYGGPQLKSGGVLTSATGYSNAVTYDVLFHTA CCCCCCEEEEEECCHHHHHCCCEEEEEEECCCCEECCCCEEEECCCCCCEEEEEEEEEEC GREANLRPYFSAGAGIKVYTSSELRFLGPPPTSPAVLLHRTQVEPAISAGAGLKYRVTHR CCCCCCCEEECCCCCEEEEECCCEEEECCCCCCCEEEEEECCCCCHHHCCCCEEEEEEEE MLVRLDFRTYFSPAPDEIFRPLGQARIRGWIYNFAPLGGVSLVF EEEEEEHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA