| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622472
Identifier: 116622472
GI number: 116622472
Start: 4270314
End: 4272665
Strand: Direct
Name: 116622472
Synonym: Acid_3370
Alternate gene names: NA
Gene position: 4270314-4272665 (Clockwise)
Preceding gene: 116622471
Following gene: 116622473
Centisome position: 42.85
GC content: 63.27
Gene sequence:
>2352_bases ATGCAACTTCATCGACTGATCCTGGTGAGCGGTCTTCTCATCCTGGCGGGACTCGCCACGCGGGCGCGCGCGCAGGCTCC GGCCCCCGCGCCCACCACCATCAAGACCGAAACCCGCCTCGTCCTCGTGGACATTGTCGTCACCAAGAAGGGCCAGTATG TCGATGACCTGGAGATGAAGAACTTCAAGGTCTGGGAAGACAACAAGGAGCAGCAGCTCAAGACGTTCTCCTTCGGCGCC GACCCGAACAGCCCCGCCGGGCAGAAGCGCTACATCGTGCTCTTCTTCGACAACTCCACCATGAGCATGGGCGAGCAGGC GCAGGCACGGCAGGCCGCCGCCCACTTCATCGAATCCAACGCCGGCCCCGACCGTCTCATCGCGGTCGTCAACTATACGG GCGCCGTGCAGGTCGCGCAGAACTTCACCGACGATATCGACCGCCTCAAGCAGGTCGTGAGCGGCATTAAAGTCTCCGCG ATCGCTCCCGGCGCGGAGCGCGCCTCTCTCGGCCGCGGTGGTCCGCGCCTCGGCGGCGCTGGCGATTTCAGCTCTCGCAG CATGCTGCTCGCTTTGCGCGGCATGGCCAAGAACCTGTCTGACGTTCCCGGCCGCAAGAGCCTGATCCTTCTCACCTCCG GTTTCCCGCTCACCAACGAAGGCCGCTCCGAGGCCAACGCCGCCATCGACGCCTGCAACAAATCCAACGTCGCCATCTAT CCCATCGATGCACGCGGATTGAATGGCCAGGGCGGCCTGGATGCCGATCCTCTCGGTGTTCGCCGCGGCGGGCGCGCCGC GCTCGATCTGCCTGCGCCCTTCCGGCCCGCCGGTCTCGCCCTCGCGGCGTCGCCGGTGATCCGGATCGCGAACTTCCTGC TCGCCATGGAACCCGAGCAGGTCGGCGGCGCCCGTACCGGCAGCACCGGCGGAGCCACCGGCGGCAGCCCAGGCGGTAGC ACCGGCGGTACGCGCGGCACGCCGGGCGGCAGTCCGGGGGGTAACCCCGCCGGCACTACCGGCCGTCCCACGGGAGGCGT TCCACCCAACTCGGGGGGAACCACGCGCGGCACCAACACGAACAACAGCACCGGCGTCAACAACAATAACAACAACAATA ACAACGGCCGCGGCGGATACAATCCCAACGACCCCAACAATCCCTACAACCGCAATAACCCGTACAACAATCCCGCGCGC CTGAATATCCCTGAATTTCCCGGCGCCACCAACAACCAGAACGTCATGTACCTCTTGGCGGAAGGCACCGGCGGCTTTGT GATCACCAACACCAATGACCTGATCGGCGGCATGAAGAAGATTGGCCAGGAGCAGAACCAGTACTACATCGTCGGCTACA CGCCCCCCGAATCGCCGGAAGGCAGCTGCCACACTTTGCGAGTCAAAGTTGATCGCGGCGGCACCGCCGTTCGCTCGCGC GCCGGCTATTGCAATGTAAAGGGCAACGATGTGCTCGCCGGCAGCCCCATCGAGAAGACGCTCGAAAGCCGCGCCACCGG TACCACAGCGGGCACTATCGCCGCCGCCATGCGAGCGCCCTTCTTCTATACCGGGGAAAACACCGCGCGCGTCGCCGTGG CCATCGAAATTCCCTCGGAGAGTATCCAGTTTGAAAAGGTGAAGGGGAAGATGCACTCCACCGTCAACGTGCTCGGCATC GCTTACAAGCAGGACGGTAGCGTAGGGGCCCGCTTCAGCGACGCGGTCAAACTGGAATTCGAAAACCAGAAGGAAGTGCA GGCCTTCAAAGCCGCACCGATGCACTACGAGAATCAATTCGACATCGCCTCCGGCACTTACAACCTCAAAGTGGTCTTCG ATTCCGGCGGCCAGAGCTTCGGGAAACTCGACACGCCGCTTATGATCAACGCCTACGATGGCGCCGCATTCGCAGTCAGC GGTGTCGCGTTCAGCCAGAAATTCGGCAAGGTCACGGAGTCCGATGCCAAGCTGGATTCGGTGCTGCTCGAAGGCCGCTC ACCGCTGGTCGCCGGACCCAACCAGTTCACGCCCACCGGCCTCTCCAGTTTCAAGGCTTCGGAAACCGTGGGCCTGTACT TTGAGGTCTACGACAATGCCGTAAACGCCGAGACCAAGCTGAATGTTGCCGCGCAATTGCGCATCCTCGACGCCAAGACT CTGGCGGTATTGAACGATTCCGGCAATGTGCTGATCGATAACTACGTTCGCCCCGGCAACCCGGTGGTCGCCGCCGCCCT CAAGCTGCCGCTCGCCGAACTCAAGCCCGGCGCGTACCGGCTCGAGTTGAAGGCGCTCGATTCCGCCGGGAACTTCGCCA CCCGCACGGCCGACTTCGAAATTAAGCCGTAA
Upstream 100 bases:
>100_bases CCGGGCAATTACGCTGTCCGGCTCGTGGTCAGGGACACCGAAGGTCAACTGATGTCGGCGCAGAACGGCGTCGTCGAAAT TCCGTATTGAGAGGTATAGC
Downstream 100 bases:
>100_bases CGCGGAGCACTTAGTGCCGCGGTTCTCGGCACGGTTGGAGACAGTAGGTCTCCAACCCGGAGAGTCACGTGCTACCGGAA AGGCATGGTTCGAACCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 783; Mature: 783
Protein sequence:
>783_residues MQLHRLILVSGLLILAGLATRARAQAPAPAPTTIKTETRLVLVDIVVTKKGQYVDDLEMKNFKVWEDNKEQQLKTFSFGA DPNSPAGQKRYIVLFFDNSTMSMGEQAQARQAAAHFIESNAGPDRLIAVVNYTGAVQVAQNFTDDIDRLKQVVSGIKVSA IAPGAERASLGRGGPRLGGAGDFSSRSMLLALRGMAKNLSDVPGRKSLILLTSGFPLTNEGRSEANAAIDACNKSNVAIY PIDARGLNGQGGLDADPLGVRRGGRAALDLPAPFRPAGLALAASPVIRIANFLLAMEPEQVGGARTGSTGGATGGSPGGS TGGTRGTPGGSPGGNPAGTTGRPTGGVPPNSGGTTRGTNTNNSTGVNNNNNNNNNGRGGYNPNDPNNPYNRNNPYNNPAR LNIPEFPGATNNQNVMYLLAEGTGGFVITNTNDLIGGMKKIGQEQNQYYIVGYTPPESPEGSCHTLRVKVDRGGTAVRSR AGYCNVKGNDVLAGSPIEKTLESRATGTTAGTIAAAMRAPFFYTGENTARVAVAIEIPSESIQFEKVKGKMHSTVNVLGI AYKQDGSVGARFSDAVKLEFENQKEVQAFKAAPMHYENQFDIASGTYNLKVVFDSGGQSFGKLDTPLMINAYDGAAFAVS GVAFSQKFGKVTESDAKLDSVLLEGRSPLVAGPNQFTPTGLSSFKASETVGLYFEVYDNAVNAETKLNVAAQLRILDAKT LAVLNDSGNVLIDNYVRPGNPVVAAALKLPLAELKPGAYRLELKALDSAGNFATRTADFEIKP
Sequences:
>Translated_783_residues MQLHRLILVSGLLILAGLATRARAQAPAPAPTTIKTETRLVLVDIVVTKKGQYVDDLEMKNFKVWEDNKEQQLKTFSFGA DPNSPAGQKRYIVLFFDNSTMSMGEQAQARQAAAHFIESNAGPDRLIAVVNYTGAVQVAQNFTDDIDRLKQVVSGIKVSA IAPGAERASLGRGGPRLGGAGDFSSRSMLLALRGMAKNLSDVPGRKSLILLTSGFPLTNEGRSEANAAIDACNKSNVAIY PIDARGLNGQGGLDADPLGVRRGGRAALDLPAPFRPAGLALAASPVIRIANFLLAMEPEQVGGARTGSTGGATGGSPGGS TGGTRGTPGGSPGGNPAGTTGRPTGGVPPNSGGTTRGTNTNNSTGVNNNNNNNNNGRGGYNPNDPNNPYNRNNPYNNPAR LNIPEFPGATNNQNVMYLLAEGTGGFVITNTNDLIGGMKKIGQEQNQYYIVGYTPPESPEGSCHTLRVKVDRGGTAVRSR AGYCNVKGNDVLAGSPIEKTLESRATGTTAGTIAAAMRAPFFYTGENTARVAVAIEIPSESIQFEKVKGKMHSTVNVLGI AYKQDGSVGARFSDAVKLEFENQKEVQAFKAAPMHYENQFDIASGTYNLKVVFDSGGQSFGKLDTPLMINAYDGAAFAVS GVAFSQKFGKVTESDAKLDSVLLEGRSPLVAGPNQFTPTGLSSFKASETVGLYFEVYDNAVNAETKLNVAAQLRILDAKT LAVLNDSGNVLIDNYVRPGNPVVAAALKLPLAELKPGAYRLELKALDSAGNFATRTADFEIKP >Mature_783_residues MQLHRLILVSGLLILAGLATRARAQAPAPAPTTIKTETRLVLVDIVVTKKGQYVDDLEMKNFKVWEDNKEQQLKTFSFGA DPNSPAGQKRYIVLFFDNSTMSMGEQAQARQAAAHFIESNAGPDRLIAVVNYTGAVQVAQNFTDDIDRLKQVVSGIKVSA IAPGAERASLGRGGPRLGGAGDFSSRSMLLALRGMAKNLSDVPGRKSLILLTSGFPLTNEGRSEANAAIDACNKSNVAIY PIDARGLNGQGGLDADPLGVRRGGRAALDLPAPFRPAGLALAASPVIRIANFLLAMEPEQVGGARTGSTGGATGGSPGGS TGGTRGTPGGSPGGNPAGTTGRPTGGVPPNSGGTTRGTNTNNSTGVNNNNNNNNNGRGGYNPNDPNNPYNRNNPYNNPAR LNIPEFPGATNNQNVMYLLAEGTGGFVITNTNDLIGGMKKIGQEQNQYYIVGYTPPESPEGSCHTLRVKVDRGGTAVRSR AGYCNVKGNDVLAGSPIEKTLESRATGTTAGTIAAAMRAPFFYTGENTARVAVAIEIPSESIQFEKVKGKMHSTVNVLGI AYKQDGSVGARFSDAVKLEFENQKEVQAFKAAPMHYENQFDIASGTYNLKVVFDSGGQSFGKLDTPLMINAYDGAAFAVS GVAFSQKFGKVTESDAKLDSVLLEGRSPLVAGPNQFTPTGLSSFKASETVGLYFEVYDNAVNAETKLNVAAQLRILDAKT LAVLNDSGNVLIDNYVRPGNPVVAAALKLPLAELKPGAYRLELKALDSAGNFATRTADFEIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82279; Mature: 82279
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLHRLILVSGLLILAGLATRARAQAPAPAPTTIKTETRLVLVDIVVTKKGQYVDDLEMK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEEEEEECCCCCCCCCCCC NFKVWEDNKEQQLKTFSFGADPNSPAGQKRYIVLFFDNSTMSMGEQAQARQAAAHFIESN CEEEECCCCHHEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCC AGPDRLIAVVNYTGAVQVAQNFTDDIDRLKQVVSGIKVSAIAPGAERASLGRGGPRLGGA CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCCCCCCC GDFSSRSMLLALRGMAKNLSDVPGRKSLILLTSGFPLTNEGRSEANAAIDACNKSNVAIY CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEE PIDARGLNGQGGLDADPLGVRRGGRAALDLPAPFRPAGLALAASPVIRIANFLLAMEPEQ EECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHHHEECHHH VGGARTGSTGGATGGSPGGSTGGTRGTPGGSPGGNPAGTTGRPTGGVPPNSGGTTRGTNT HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NNSTGVNNNNNNNNNGRGGYNPNDPNNPYNRNNPYNNPARLNIPEFPGATNNQNVMYLLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEE EGTGGFVITNTNDLIGGMKKIGQEQNQYYIVGYTPPESPEGSCHTLRVKVDRGGTAVRSR ECCCCEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCHHCC AGYCNVKGNDVLAGSPIEKTLESRATGTTAGTIAAAMRAPFFYTGENTARVAVAIEIPSE CCEEECCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCEEEEEEEECCCC SIQFEKVKGKMHSTVNVLGIAYKQDGSVGARFSDAVKLEFENQKEVQAFKAAPMHYENQF CCCHHHHHCHHHCEEEEEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCE DIASGTYNLKVVFDSGGQSFGKLDTPLMINAYDGAAFAVSGVAFSQKFGKVTESDAKLDS EEECCEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECHHHHHHHCCCCCCCHHHHH VLLEGRSPLVAGPNQFTPTGLSSFKASETVGLYFEVYDNAVNAETKLNVAAQLRILDAKT HHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEEECEE LAVLNDSGNVLIDNYVRPGNPVVAAALKLPLAELKPGAYRLELKALDSAGNFATRTADFE EEEEECCCCEEEECCCCCCCCEEEHHHHCCHHHCCCCEEEEEEEEECCCCCCEEEEECEE IKP ECC >Mature Secondary Structure MQLHRLILVSGLLILAGLATRARAQAPAPAPTTIKTETRLVLVDIVVTKKGQYVDDLEMK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEEEEEECCCCCCCCCCCC NFKVWEDNKEQQLKTFSFGADPNSPAGQKRYIVLFFDNSTMSMGEQAQARQAAAHFIESN CEEEECCCCHHEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCC AGPDRLIAVVNYTGAVQVAQNFTDDIDRLKQVVSGIKVSAIAPGAERASLGRGGPRLGGA CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCCCCCCC GDFSSRSMLLALRGMAKNLSDVPGRKSLILLTSGFPLTNEGRSEANAAIDACNKSNVAIY CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEE PIDARGLNGQGGLDADPLGVRRGGRAALDLPAPFRPAGLALAASPVIRIANFLLAMEPEQ EECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHHHEECHHH VGGARTGSTGGATGGSPGGSTGGTRGTPGGSPGGNPAGTTGRPTGGVPPNSGGTTRGTNT HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NNSTGVNNNNNNNNNGRGGYNPNDPNNPYNRNNPYNNPARLNIPEFPGATNNQNVMYLLA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEE EGTGGFVITNTNDLIGGMKKIGQEQNQYYIVGYTPPESPEGSCHTLRVKVDRGGTAVRSR ECCCCEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCHHCC AGYCNVKGNDVLAGSPIEKTLESRATGTTAGTIAAAMRAPFFYTGENTARVAVAIEIPSE CCEEECCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCEEEEEEEECCCC SIQFEKVKGKMHSTVNVLGIAYKQDGSVGARFSDAVKLEFENQKEVQAFKAAPMHYENQF CCCHHHHHCHHHCEEEEEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCE DIASGTYNLKVVFDSGGQSFGKLDTPLMINAYDGAAFAVSGVAFSQKFGKVTESDAKLDS EEECCEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECHHHHHHHCCCCCCCHHHHH VLLEGRSPLVAGPNQFTPTGLSSFKASETVGLYFEVYDNAVNAETKLNVAAQLRILDAKT HHHCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEEECEE LAVLNDSGNVLIDNYVRPGNPVVAAALKLPLAELKPGAYRLELKALDSAGNFATRTADFE EEEEECCCCEEEECCCCCCCCEEEHHHHCCHHHCCCCEEEEEEEEECCCCCCEEEEECEE IKP ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA