| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622467
Identifier: 116622467
GI number: 116622467
Start: 4263125
End: 4263916
Strand: Reverse
Name: 116622467
Synonym: Acid_3365
Alternate gene names: NA
Gene position: 4263916-4263125 (Counterclockwise)
Preceding gene: 116622468
Following gene: 116622466
Centisome position: 42.79
GC content: 59.22
Gene sequence:
>792_bases ATGACTGCGACACAACTTACTCACAACGTAGTATCCAGAGACGAATGGCTGCAGGTGCGCGTTGCGCTTCTTGCGGCGGA GAAAGAATTGACCCACCGTCGCGACGAACTCGCGCGGCGACGCCGCGAACTGCCGTGGGAACGCGTCGAAAAGAATTACG CCTTTGAAGGTCCCCACGGCAGGGAGACGCTGGCCGACCTGTTCGCCGGACGCAGCCAGCTGATCATTTACCACTTCATG TTTGGCCCCACATGGGAAGAAGGCTGCAAATCCTGCTCCCTTGTGGCAGATCACTTCGATGGGCCGCAGATTCACCTGGC GCAGCGCGACACGGCCTTCGCGGTAGTCTCGCGCGCGCCGATGCCGCGGATCCAAGCCTTTCAAGACCGCATGGGCTGGC GCTTCCACTGGGTTTCGGCATTCGGCACGGATTTCAACCGCGATTACGGGGTGAATTTCACGAAAGAGGAACTCGCGGGC GAAGTCACTTACAACTACGGCAAACAGCGCTTCGGATCGGAGGAAGCTCCGGGCATCAGCGTGTTCTACAAGGCAGGGGA CGAGATCTTTCATACTTACTCGACCTATGGACGCGGGTTGGATGGCCTGATGGGAACGTATCAGCTCCTCGATCTCGTTC CCAAGGGCCGCGATGAGGATGGCCTGAAATTCGCGATGTCGTGGGTGCGCCACCACGATAAGTACGGTGACGATTACGCT GTGGACGCCAAGACCGGCTATCAGCAGCCGCGCGAAACCGAGGGGTGCTCCAAACACGAGGAGTGTGCGTGA
Upstream 100 bases:
>100_bases CTAACTGGAGGGCCAACCGAAACCCCGCGCAGGCACCGGCAAGACACGTGTGTCTGCACGTAACCGCTTACCCGTAACCA CTTACGAAAGAGGAAATCCG
Downstream 100 bases:
>100_bases TGACCGGGCAGTGCTGCACGGGCGGGGGGCGGCGGCGCCGCCTCGCCCGCCGTTGCGTGTCGGCCGCGGCCTCCGTGCTG CCGGGGGCCGCTCTGGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTATQLTHNVVSRDEWLQVRVALLAAEKELTHRRDELARRRRELPWERVEKNYAFEGPHGRETLADLFAGRSQLIIYHFM FGPTWEEGCKSCSLVADHFDGPQIHLAQRDTAFAVVSRAPMPRIQAFQDRMGWRFHWVSAFGTDFNRDYGVNFTKEELAG EVTYNYGKQRFGSEEAPGISVFYKAGDEIFHTYSTYGRGLDGLMGTYQLLDLVPKGRDEDGLKFAMSWVRHHDKYGDDYA VDAKTGYQQPRETEGCSKHEECA
Sequences:
>Translated_263_residues MTATQLTHNVVSRDEWLQVRVALLAAEKELTHRRDELARRRRELPWERVEKNYAFEGPHGRETLADLFAGRSQLIIYHFM FGPTWEEGCKSCSLVADHFDGPQIHLAQRDTAFAVVSRAPMPRIQAFQDRMGWRFHWVSAFGTDFNRDYGVNFTKEELAG EVTYNYGKQRFGSEEAPGISVFYKAGDEIFHTYSTYGRGLDGLMGTYQLLDLVPKGRDEDGLKFAMSWVRHHDKYGDDYA VDAKTGYQQPRETEGCSKHEECA >Mature_262_residues TATQLTHNVVSRDEWLQVRVALLAAEKELTHRRDELARRRRELPWERVEKNYAFEGPHGRETLADLFAGRSQLIIYHFMF GPTWEEGCKSCSLVADHFDGPQIHLAQRDTAFAVVSRAPMPRIQAFQDRMGWRFHWVSAFGTDFNRDYGVNFTKEELAGE VTYNYGKQRFGSEEAPGISVFYKAGDEIFHTYSTYGRGLDGLMGTYQLLDLVPKGRDEDGLKFAMSWVRHHDKYGDDYAV DAKTGYQQPRETEGCSKHEECA
Specific function: Unknown
COG id: COG4312
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30288; Mature: 30157
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATQLTHNVVSRDEWLQVRVALLAAEKELTHRRDELARRRRELPWERVEKNYAFEGPHG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC RETLADLFAGRSQLIIYHFMFGPTWEEGCKSCSLVADHFDGPQIHLAQRDTAFAVVSRAP HHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCC MPRIQAFQDRMGWRFHWVSAFGTDFNRDYGVNFTKEELAGEVTYNYGKQRFGSEEAPGIS CHHHHHHHHHCCCEEEEEEHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCEE VFYKAGDEIFHTYSTYGRGLDGLMGTYQLLDLVPKGRDEDGLKFAMSWVRHHDKYGDDYA EEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEE VDAKTGYQQPRETEGCSKHEECA EECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TATQLTHNVVSRDEWLQVRVALLAAEKELTHRRDELARRRRELPWERVEKNYAFEGPHG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC RETLADLFAGRSQLIIYHFMFGPTWEEGCKSCSLVADHFDGPQIHLAQRDTAFAVVSRAP HHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCC MPRIQAFQDRMGWRFHWVSAFGTDFNRDYGVNFTKEELAGEVTYNYGKQRFGSEEAPGIS CHHHHHHHHHCCCEEEEEEHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCEE VFYKAGDEIFHTYSTYGRGLDGLMGTYQLLDLVPKGRDEDGLKFAMSWVRHHDKYGDDYA EEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEE VDAKTGYQQPRETEGCSKHEECA EECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA