| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622462
Identifier: 116622462
GI number: 116622462
Start: 4255744
End: 4258695
Strand: Direct
Name: 116622462
Synonym: Acid_3360
Alternate gene names: NA
Gene position: 4255744-4258695 (Clockwise)
Preceding gene: 116622459
Following gene: 116622464
Centisome position: 42.7
GC content: 64.36
Gene sequence:
>2952_bases TTGCTCCGTCCCGTCCTGCTGTTCGCGCTCACCACTCTCACCTCTCACGCACAATCCGCCGACTTTCGCTGGGTTCGTCA ACTCGGCGGCGCTGCCGGCCAGGCAATCGCCGGCATGGCCACGGATCCCCAGGGCAACATCTACGTCGCCGGCAACACCA CATCAGTCGATTTCCCCGTCCGCGGCGCTATCCAGCCGCATCCCGCCGGCTCCGGCATCTTTCGCGTCGATGGTCCCGGC GCGGCCTGGAAAAATCTGTACCAGGCCGGTGCCACCGCCGCATACGCCCTCGCGGTGGATCCGCGCGCGCCGAACAAAAT CTACGCCGGCACCGCCACCGGCCTCTTGCGATCTCGTGATAGCGGTGAGTCTTGGACCCCCGCCATCTCCTTTGGCGTCA GGGTTAATGCGCTCACGGTAGATCCCGCCAATTCCGGCGTGGTCTATGCGGCTAGCCAGGGCCAGGGCTTCTACAAATCA CTCGACTCCGGTTTCACCTGGTTGCCGATCAATAACGGCGTTCCCGCCGATAGCGATGGCCGCGTCTTTGTGTTCGGGAT CTGGATCGACCCGCATAACTCCGCCGTGCTGCTGGCCGCTTCTTCTGTAGGAGGGCTGCTGCGCTCCACCGATTCCGGCG CTTCCTGGACCGTAATCATTTCTTCTGTAGTGCCTCTGCAGGTCTCTAGCGTCGCGTTCGACCCGGTCCATGCCGGCGTG GTCTACGCTACGGAGTCCCGCCTCATGGTCGTCAGTAAAGACGATGGCCTTACCTGGAATCCTCTCGGCCAGGTGGAACT CGGCTACCAGTCGCCGACTGTCATCCTGCCCGACCCCACCCATGAGAACGTCCTCTATGCCTCTAGCGACAGCGCCCTCT GGAAGAGCGCGGATGCCGGCGCCACATGGCAACGCAAGATTGATCAGTTCTCCGCCAACTTGACCCTTGATCACTTCACC AATGCCATCTATGCCGTCCTCGGAGCCCGCCTCGTTGTCACCACCGATGGCTTCGATACCACGACGCCCATCGGGCCGCT GATCTTCACCACGCTGGTCACGCTCGCGGCCGGCGGCGGCCGGGTCTTCGTGGGCGCGCAAAGCTCCACCGATATCTTCG TCGCCAAACTCGATCCCGATGGCAACACCATCTTCGCCACCTACTTCGGGGGCAGCGCCACCGATCTGGCCAGCGCCCTT GGGGTGGATTCCGCCGGTGGCGTTTACGTCACGGGCACCACTCAGTCGCTCGACTTTCCGTTTTCCGCCGGTGCCTTCTC GGGAGCCGGGCGCGCCTTCCTCTTCAAATTGAATCCCGATGGCTCGCTGGCCTATGCCACTGGCCTGCAGGGAGGAACAC CGAACGCCATCGCGGTGGATGCCGCCGGCCGCGCCGTGGTTACCGGTGTCTCGAGCGGCGATTTGCCCGTTACCCCCGGC GCCTGGCAGACAAAGTTTCTGTTCACCTTTTGCGGTCCCGGCTGCCAGTTCGTGCCGCCCCCAACCAACGCTTTTGTGGC CGAATTCGATTCCGCCGGGGCCTCGCTCGTCTTCGCGACTTACCTTGGCTCCGAAACCGAGTCGGCCGCCGCCCTCACCC TGACCCCCGACGGCTCGATCGTAGTCGCGGGCAAGCGAACCCTATACCAGCTCGATTCCTCCGGTTCATCCTTGCTCCGT TCGAAGTCTCTTCCCGCCGATATTCGAGCGCTCTCCACCGACGCCAGGGGGAACATCCTGGCCGCCGGCAGCACCCAGGA CGCACTCTTTCCCACGACACCGGGCGCATTCCAGACAACTCTCTACCGGCTCCCGACACTTCCCGGCACGCTCGGTAACA CAGGCTCGGGCGACGTGTTTGTGACGCGGCTGGATTCCGAATTGAATATTCTGAATTCCACATTGCTCGCGGGCGAGGCC TCCGAGATCGCCTTGAGCGTCGAACCCTCGGCCAGCGGCAATATCATCGTCGGCGGCTCCACGTACTCCCAGGGCTTCCC CTCTCACGGCCCGGTGCAGTCGCCCTTCTCGCCCACTACCGGCTTCCTCTCCCAACTCACGCCAGACCTCTCGGCGCTGG TCTTCTCCACTTTCACCGGCGACAACCGCCCTTTCTTCGTGCGCTCCGTGGCCGCCACGCCAGATGGCGGCGTCGTCCTG GCGGGCTCTACCAGCCAGCCTCCTTTTTTCAATTTCACTGCGCTCTTTCCCGATACGGCGACTCAGGCCTACGTGGTTCG TGCCGATCCCACGCCGAGCAACCAGCCCAATCCGGCGCCGCGTATCGATCGCGTGGTTAACGCAGCGAGCCAGCTCGCCA GCGCCCTTTCTCCACGGGAAACCATCCAGGTCCGCGGCGATTTCTTCGACGCCGAAGCAGCCCTCTATCTCAACGGCGAT GCCCTTCCGTTGCAGTCCCACGACCGCACCACCCTCATCGCCGCCGTTCCGACCGAGTTGTCGATGAGGGGCGCCGCCAC CATCCAGGTCCGCGCCGCCGGCGGGACCGCCTCGATCCTGGTCCCCACGGCCGCAGCCTCGCCCGGCGTCTTCTCTCGTG ACGCCACCGGCAGTGGCCAGGGCTACATCCTCAACAAGGACGGCTCCCTCAACTCGCCCGACAACCCCGCCGCCGAGGGC GAACCCATCACCATCTGCGCCACCGGTGTCGGCTCCATGACCTTCGATCACGACTACGCCGTCACGGACGCGGTGGTCGA TGTGCGCGTGGACGGATTCTCCGCTGCCGGCATTGCTGCTGTCCTCGGCCCCGCGCCCGGACTCCCCGGCGACGTCTACC AGATTTCCGTGTACGTCCCGCACCCCGTCGATTTCGTTGCGTCCAACCCGAACCTGAAGGATTTTGTCATGCCGCCGCAG GTGGGCGTGACGCTCATCGTCAACGGCGTTCCGAGCCAGGCAGGTATCGCTCTCTCGGTGGGGAATCGATAA
Upstream 100 bases:
>100_bases TCAGATCCCCCCGCACACCGTTCGCCTCGTCCACTAACCTGTATCGATTGATGTACTCTGATAGGTGCCGCGCCCGGAAA CCGGAAACCGAGGTGTGCCT
Downstream 100 bases:
>100_bases GCGCTCGCTTATTCGTGGGTTTCGCCGGTGGCCTGCTCGTCCAGCAGACGCACCATGTCGCTTAAGTGAAACGGCTTCCG GATGAAGCCCTGGGTCCGCA
Product: BNR repeat-containing glycosyl hydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 983; Mature: 983
Protein sequence:
>983_residues MLRPVLLFALTTLTSHAQSADFRWVRQLGGAAGQAIAGMATDPQGNIYVAGNTTSVDFPVRGAIQPHPAGSGIFRVDGPG AAWKNLYQAGATAAYALAVDPRAPNKIYAGTATGLLRSRDSGESWTPAISFGVRVNALTVDPANSGVVYAASQGQGFYKS LDSGFTWLPINNGVPADSDGRVFVFGIWIDPHNSAVLLAASSVGGLLRSTDSGASWTVIISSVVPLQVSSVAFDPVHAGV VYATESRLMVVSKDDGLTWNPLGQVELGYQSPTVILPDPTHENVLYASSDSALWKSADAGATWQRKIDQFSANLTLDHFT NAIYAVLGARLVVTTDGFDTTTPIGPLIFTTLVTLAAGGGRVFVGAQSSTDIFVAKLDPDGNTIFATYFGGSATDLASAL GVDSAGGVYVTGTTQSLDFPFSAGAFSGAGRAFLFKLNPDGSLAYATGLQGGTPNAIAVDAAGRAVVTGVSSGDLPVTPG AWQTKFLFTFCGPGCQFVPPPTNAFVAEFDSAGASLVFATYLGSETESAAALTLTPDGSIVVAGKRTLYQLDSSGSSLLR SKSLPADIRALSTDARGNILAAGSTQDALFPTTPGAFQTTLYRLPTLPGTLGNTGSGDVFVTRLDSELNILNSTLLAGEA SEIALSVEPSASGNIIVGGSTYSQGFPSHGPVQSPFSPTTGFLSQLTPDLSALVFSTFTGDNRPFFVRSVAATPDGGVVL AGSTSQPPFFNFTALFPDTATQAYVVRADPTPSNQPNPAPRIDRVVNAASQLASALSPRETIQVRGDFFDAEAALYLNGD ALPLQSHDRTTLIAAVPTELSMRGAATIQVRAAGGTASILVPTAAASPGVFSRDATGSGQGYILNKDGSLNSPDNPAAEG EPITICATGVGSMTFDHDYAVTDAVVDVRVDGFSAAGIAAVLGPAPGLPGDVYQISVYVPHPVDFVASNPNLKDFVMPPQ VGVTLIVNGVPSQAGIALSVGNR
Sequences:
>Translated_983_residues MLRPVLLFALTTLTSHAQSADFRWVRQLGGAAGQAIAGMATDPQGNIYVAGNTTSVDFPVRGAIQPHPAGSGIFRVDGPG AAWKNLYQAGATAAYALAVDPRAPNKIYAGTATGLLRSRDSGESWTPAISFGVRVNALTVDPANSGVVYAASQGQGFYKS LDSGFTWLPINNGVPADSDGRVFVFGIWIDPHNSAVLLAASSVGGLLRSTDSGASWTVIISSVVPLQVSSVAFDPVHAGV VYATESRLMVVSKDDGLTWNPLGQVELGYQSPTVILPDPTHENVLYASSDSALWKSADAGATWQRKIDQFSANLTLDHFT NAIYAVLGARLVVTTDGFDTTTPIGPLIFTTLVTLAAGGGRVFVGAQSSTDIFVAKLDPDGNTIFATYFGGSATDLASAL GVDSAGGVYVTGTTQSLDFPFSAGAFSGAGRAFLFKLNPDGSLAYATGLQGGTPNAIAVDAAGRAVVTGVSSGDLPVTPG AWQTKFLFTFCGPGCQFVPPPTNAFVAEFDSAGASLVFATYLGSETESAAALTLTPDGSIVVAGKRTLYQLDSSGSSLLR SKSLPADIRALSTDARGNILAAGSTQDALFPTTPGAFQTTLYRLPTLPGTLGNTGSGDVFVTRLDSELNILNSTLLAGEA SEIALSVEPSASGNIIVGGSTYSQGFPSHGPVQSPFSPTTGFLSQLTPDLSALVFSTFTGDNRPFFVRSVAATPDGGVVL AGSTSQPPFFNFTALFPDTATQAYVVRADPTPSNQPNPAPRIDRVVNAASQLASALSPRETIQVRGDFFDAEAALYLNGD ALPLQSHDRTTLIAAVPTELSMRGAATIQVRAAGGTASILVPTAAASPGVFSRDATGSGQGYILNKDGSLNSPDNPAAEG EPITICATGVGSMTFDHDYAVTDAVVDVRVDGFSAAGIAAVLGPAPGLPGDVYQISVYVPHPVDFVASNPNLKDFVMPPQ VGVTLIVNGVPSQAGIALSVGNR >Mature_983_residues MLRPVLLFALTTLTSHAQSADFRWVRQLGGAAGQAIAGMATDPQGNIYVAGNTTSVDFPVRGAIQPHPAGSGIFRVDGPG AAWKNLYQAGATAAYALAVDPRAPNKIYAGTATGLLRSRDSGESWTPAISFGVRVNALTVDPANSGVVYAASQGQGFYKS LDSGFTWLPINNGVPADSDGRVFVFGIWIDPHNSAVLLAASSVGGLLRSTDSGASWTVIISSVVPLQVSSVAFDPVHAGV VYATESRLMVVSKDDGLTWNPLGQVELGYQSPTVILPDPTHENVLYASSDSALWKSADAGATWQRKIDQFSANLTLDHFT NAIYAVLGARLVVTTDGFDTTTPIGPLIFTTLVTLAAGGGRVFVGAQSSTDIFVAKLDPDGNTIFATYFGGSATDLASAL GVDSAGGVYVTGTTQSLDFPFSAGAFSGAGRAFLFKLNPDGSLAYATGLQGGTPNAIAVDAAGRAVVTGVSSGDLPVTPG AWQTKFLFTFCGPGCQFVPPPTNAFVAEFDSAGASLVFATYLGSETESAAALTLTPDGSIVVAGKRTLYQLDSSGSSLLR SKSLPADIRALSTDARGNILAAGSTQDALFPTTPGAFQTTLYRLPTLPGTLGNTGSGDVFVTRLDSELNILNSTLLAGEA SEIALSVEPSASGNIIVGGSTYSQGFPSHGPVQSPFSPTTGFLSQLTPDLSALVFSTFTGDNRPFFVRSVAATPDGGVVL AGSTSQPPFFNFTALFPDTATQAYVVRADPTPSNQPNPAPRIDRVVNAASQLASALSPRETIQVRGDFFDAEAALYLNGD ALPLQSHDRTTLIAAVPTELSMRGAATIQVRAAGGTASILVPTAAASPGVFSRDATGSGQGYILNKDGSLNSPDNPAAEG EPITICATGVGSMTFDHDYAVTDAVVDVRVDGFSAAGIAAVLGPAPGLPGDVYQISVYVPHPVDFVASNPNLKDFVMPPQ VGVTLIVNGVPSQAGIALSVGNR
Specific function: Unknown
COG id: COG3291
COG function: function code R; FOG: PKD repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101050; Mature: 101050
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPVLLFALTTLTSHAQSADFRWVRQLGGAAGQAIAGMATDPQGNIYVAGNTTSVDFPV CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEECEEECCCCCEEEECCCEEECCCC RGAIQPHPAGSGIFRVDGPGAAWKNLYQAGATAAYALAVDPRAPNKIYAGTATGLLRSRD CCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCEEEECCHHHHHCCCC SGESWTPAISFGVRVNALTVDPANSGVVYAASQGQGFYKSLDSGFTWLPINNGVPADSDG CCCCCCCEEEECEEEEEEEECCCCCCEEEEECCCCHHHHHHCCCEEEEEECCCCCCCCCC RVFVFGIWIDPHNSAVLLAASSVGGLLRSTDSGASWTVIISSVVPLQVSSVAFDPVHAGV CEEEEEEEECCCCCEEEEEECCCCCHHCCCCCCCEEEEEEEEECCEEEEEEEECCCCCCE VYATESRLMVVSKDDGLTWNPLGQVELGYQSPTVILPDPTHENVLYASSDSALWKSADAG EEEECCEEEEEECCCCCEECCCCCEEECCCCCEEEECCCCCCCEEEECCCCCCEECCCCC ATWQRKIDQFSANLTLDHFTNAIYAVLGARLVVTTDGFDTTTPIGPLIFTTLVTLAAGGG CHHHHHHHHHHCCEEHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCC RVFVGAQSSTDIFVAKLDPDGNTIFATYFGGSATDLASALGVDSAGGVYVTGTTQSLDFP EEEEECCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCCEEEEECCCCCCCC FSAGAFSGAGRAFLFKLNPDGSLAYATGLQGGTPNAIAVDAAGRAVVTGVSSGDLPVTPG CCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCCC AWQTKFLFTFCGPGCQFVPPPTNAFVAEFDSAGASLVFATYLGSETESAAALTLTPDGSI CCCEEEEEEEECCCCEECCCCCCCEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCCE VVAGKRTLYQLDSSGSSLLRSKSLPADIRALSTDARGNILAAGSTQDALFPTTPGAFQTT EEECCCEEEEECCCCHHHHHHCCCCHHHEEECCCCCCCEEEECCCCCCCCCCCCCHHHHH LYRLPTLPGTLGNTGSGDVFVTRLDSELNILNSTLLAGEASEIALSVEPSASGNIIVGGS EEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHEEECCCCCEEEEEECCCCCCCEEECCC TYSQGFPSHGPVQSPFSPTTGFLSQLTPDLSALVFSTFTGDNRPFFVRSVAATPDGGVVL CCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHEEEEEEECCCCCCEEEEEEECCCCCCEEE AGSTSQPPFFNFTALFPDTATQAYVVRADPTPSNQPNPAPRIDRVVNAASQLASALSPRE ECCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCE TIQVRGDFFDAEAALYLNGDALPLQSHDRTTLIAAVPTELSMRGAATIQVRAAGGTASIL EEEEECCEECCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEE VPTAAASPGVFSRDATGSGQGYILNKDGSLNSPDNPAAEGEPITICATGVGSMTFDHDYA EEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCE VTDAVVDVRVDGFSAAGIAAVLGPAPGLPGDVYQISVYVPHPVDFVASNPNLKDFVMPPQ EEEEEEEEEECCCCCCCHHEEECCCCCCCCCEEEEEEEECCCCEEEECCCCCCEEECCCC VGVTLIVNGVPSQAGIALSVGNR CCEEEEEECCCCCCCEEEEECCC >Mature Secondary Structure MLRPVLLFALTTLTSHAQSADFRWVRQLGGAAGQAIAGMATDPQGNIYVAGNTTSVDFPV CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEECEEECCCCCEEEECCCEEECCCC RGAIQPHPAGSGIFRVDGPGAAWKNLYQAGATAAYALAVDPRAPNKIYAGTATGLLRSRD CCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCEEEECCHHHHHCCCC SGESWTPAISFGVRVNALTVDPANSGVVYAASQGQGFYKSLDSGFTWLPINNGVPADSDG CCCCCCCEEEECEEEEEEEECCCCCCEEEEECCCCHHHHHHCCCEEEEEECCCCCCCCCC RVFVFGIWIDPHNSAVLLAASSVGGLLRSTDSGASWTVIISSVVPLQVSSVAFDPVHAGV CEEEEEEEECCCCCEEEEEECCCCCHHCCCCCCCEEEEEEEEECCEEEEEEEECCCCCCE VYATESRLMVVSKDDGLTWNPLGQVELGYQSPTVILPDPTHENVLYASSDSALWKSADAG EEEECCEEEEEECCCCCEECCCCCEEECCCCCEEEECCCCCCCEEEECCCCCCEECCCCC ATWQRKIDQFSANLTLDHFTNAIYAVLGARLVVTTDGFDTTTPIGPLIFTTLVTLAAGGG CHHHHHHHHHHCCEEHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCC RVFVGAQSSTDIFVAKLDPDGNTIFATYFGGSATDLASALGVDSAGGVYVTGTTQSLDFP EEEEECCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCCEEEEECCCCCCCC FSAGAFSGAGRAFLFKLNPDGSLAYATGLQGGTPNAIAVDAAGRAVVTGVSSGDLPVTPG CCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCCCCC AWQTKFLFTFCGPGCQFVPPPTNAFVAEFDSAGASLVFATYLGSETESAAALTLTPDGSI CCCEEEEEEEECCCCEECCCCCCCEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCCE VVAGKRTLYQLDSSGSSLLRSKSLPADIRALSTDARGNILAAGSTQDALFPTTPGAFQTT EEECCCEEEEECCCCHHHHHHCCCCHHHEEECCCCCCCEEEECCCCCCCCCCCCCHHHHH LYRLPTLPGTLGNTGSGDVFVTRLDSELNILNSTLLAGEASEIALSVEPSASGNIIVGGS EEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHEEECCCCCEEEEEECCCCCCCEEECCC TYSQGFPSHGPVQSPFSPTTGFLSQLTPDLSALVFSTFTGDNRPFFVRSVAATPDGGVVL CCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHEEEEEEECCCCCCEEEEEEECCCCCCEEE AGSTSQPPFFNFTALFPDTATQAYVVRADPTPSNQPNPAPRIDRVVNAASQLASALSPRE ECCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCE TIQVRGDFFDAEAALYLNGDALPLQSHDRTTLIAAVPTELSMRGAATIQVRAAGGTASIL EEEEECCEECCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEE VPTAAASPGVFSRDATGSGQGYILNKDGSLNSPDNPAAEGEPITICATGVGSMTFDHDYA EEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCE VTDAVVDVRVDGFSAAGIAAVLGPAPGLPGDVYQISVYVPHPVDFVASNPNLKDFVMPPQ EEEEEEEEEECCCCCCCHHEEECCCCCCCCCEEEEEEEECCCCEEEECCCCCCEEECCCC VGVTLIVNGVPSQAGIALSVGNR CCEEEEEECCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA