| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116622446
Identifier: 116622446
GI number: 116622446
Start: 4233110
End: 4234051
Strand: Direct
Name: 116622446
Synonym: Acid_3344
Alternate gene names: NA
Gene position: 4233110-4234051 (Clockwise)
Preceding gene: 116622445
Following gene: 116622447
Centisome position: 42.48
GC content: 59.24
Gene sequence:
>942_bases ATGACTAGACGAAGACTTATCACCTTCCTGGCATCTTGTGCCGTGGGCGCCCTTCTCGCCGTGCCTTCGCACGCGCAGGT GTACACGCTGACCAAGGACCAGCTCATCGACCTAACGTCGCAAAACAAGTTCGACCGCTTTCCCGATGGACGGCCGAAGA TCCCCGATGCCCTTCTGGAACGGGCGCGCGGCATGTCGGCCGAAGAGGTTTGGGGCGGCTTGAATCTGAATGCCGGCGGG GGTGGAAGAGGCGGGCCTGCCTACCGCAATCAGTATGAGGACAATTTCCAGGTGCTGCACCCCAAGCTGAAATTGGTGGG CCGCGCCTTCACGGTGCAGTTCATGCCAGCGCGCCCCGATATGGATGCGTATGCCAATGCCAAAGCCAAGGCCGCCGGCC TGGGTGACCGCATCTACAACCAAACCGCGATCGACATGCTTCAGCCGGGCGACGTCCTTGTGGTCGATCTCTTCGGGAAG GTGGACGGCGGGACCATCGTGGGCGACAATCTTTTCTACTACATCATGAAGGCGACGAAGACGGGCGGCATCGTGGTGGA CGGCGCGGTTCGCGACCTGGAAGGCATCTCCGACATGATGATGCCCGCATATTTCCGCAGGACTCACCCCAGCGCAATCG CCAACGTGACGCTCACCGGCATCAACGTTCCGGTTCGAATCGGGAACACGACGGTGATGCCTGGCGATATGGTGGTGGGC GATCCGGAGGGAGTTTATTTCGTGCCGCCCCACCTGGTGCAACAGGTGGTGGACAATGCCGACACGATCCACATTCACGA CGAGTGGACGCGCAAGAAATTCGACGAGGGCAAGTACAAATCGACGGATATATACGGCAGTCCGAAGGATCCGGCGCTTA AAAAGGAATACGACGAGTATCTCCAAAAGCGTCGTGCGGAAATTCAGAAGGGCGGGAAGTGA
Upstream 100 bases:
>100_bases CGAAGTGGTCAAGCAGCACCTGGGTGAGCCGGGTTATTTTGAAGCCACACCGTACTGGAATGTAGACCGGTCCAACGACC GTCAGTGGAGCTGAAACCGT
Downstream 100 bases:
>100_bases GATGAAGCGTAAGCTGCTTCTGGCCGGGCTACCGGCGCTTGTGGTGGGCGGATGGCTGCTGGCGCAGCCATCCGGGGAAG AGAACATCATCGAGGGTTTT
Product: demethylmenaquinone methyltransferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTRRRLITFLASCAVGALLAVPSHAQVYTLTKDQLIDLTSQNKFDRFPDGRPKIPDALLERARGMSAEEVWGGLNLNAGG GGRGGPAYRNQYEDNFQVLHPKLKLVGRAFTVQFMPARPDMDAYANAKAKAAGLGDRIYNQTAIDMLQPGDVLVVDLFGK VDGGTIVGDNLFYYIMKATKTGGIVVDGAVRDLEGISDMMMPAYFRRTHPSAIANVTLTGINVPVRIGNTTVMPGDMVVG DPEGVYFVPPHLVQQVVDNADTIHIHDEWTRKKFDEGKYKSTDIYGSPKDPALKKEYDEYLQKRRAEIQKGGK
Sequences:
>Translated_313_residues MTRRRLITFLASCAVGALLAVPSHAQVYTLTKDQLIDLTSQNKFDRFPDGRPKIPDALLERARGMSAEEVWGGLNLNAGG GGRGGPAYRNQYEDNFQVLHPKLKLVGRAFTVQFMPARPDMDAYANAKAKAAGLGDRIYNQTAIDMLQPGDVLVVDLFGK VDGGTIVGDNLFYYIMKATKTGGIVVDGAVRDLEGISDMMMPAYFRRTHPSAIANVTLTGINVPVRIGNTTVMPGDMVVG DPEGVYFVPPHLVQQVVDNADTIHIHDEWTRKKFDEGKYKSTDIYGSPKDPALKKEYDEYLQKRRAEIQKGGK >Mature_312_residues TRRRLITFLASCAVGALLAVPSHAQVYTLTKDQLIDLTSQNKFDRFPDGRPKIPDALLERARGMSAEEVWGGLNLNAGGG GRGGPAYRNQYEDNFQVLHPKLKLVGRAFTVQFMPARPDMDAYANAKAKAAGLGDRIYNQTAIDMLQPGDVLVVDLFGKV DGGTIVGDNLFYYIMKATKTGGIVVDGAVRDLEGISDMMMPAYFRRTHPSAIANVTLTGINVPVRIGNTTVMPGDMVVGD PEGVYFVPPHLVQQVVDNADTIHIHDEWTRKKFDEGKYKSTDIYGSPKDPALKKEYDEYLQKRRAEIQKGGK
Specific function: Unknown
COG id: COG0684
COG function: function code H; Demethylmenaquinone methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the RraA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005493 [H]
Pfam domain/function: PF03737 Methyltransf_6 [H]
EC number: NA
Molecular weight: Translated: 34464; Mature: 34333
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRRLITFLASCAVGALLAVPSHAQVYTLTKDQLIDLTSQNKFDRFPDGRPKIPDALLE CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHEECCCCCCCCCCCCCCCCCCHHHHH RARGMSAEEVWGGLNLNAGGGGRGGPAYRNQYEDNFQVLHPKLKLVGRAFTVQFMPARPD HHCCCCHHHHHCCCEECCCCCCCCCCHHHCCCCCCCEEECHHHHHHCEEEEEEEECCCCC MDAYANAKAKAAGLGDRIYNQTAIDMLQPGDVLVVDLFGKVDGGTIVGDNLFYYIMKATK CHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCEEEEEEEECC TGGIVVDGAVRDLEGISDMMMPAYFRRTHPSAIANVTLTGINVPVRIGNTTVMPGDMVVG CCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECEEEEEECCEEECCCCEEEE DPEGVYFVPPHLVQQVVDNADTIHIHDEWTRKKFDEGKYKSTDIYGSPKDPALKKEYDEY CCCCEEECCHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH LQKRRAEIQKGGK HHHHHHHHHCCCC >Mature Secondary Structure TRRRLITFLASCAVGALLAVPSHAQVYTLTKDQLIDLTSQNKFDRFPDGRPKIPDALLE CHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHEECCCCCCCCCCCCCCCCCCHHHHH RARGMSAEEVWGGLNLNAGGGGRGGPAYRNQYEDNFQVLHPKLKLVGRAFTVQFMPARPD HHCCCCHHHHHCCCEECCCCCCCCCCHHHCCCCCCCEEECHHHHHHCEEEEEEEECCCCC MDAYANAKAKAAGLGDRIYNQTAIDMLQPGDVLVVDLFGKVDGGTIVGDNLFYYIMKATK CHHHCCCCHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCCEEEEEEEECC TGGIVVDGAVRDLEGISDMMMPAYFRRTHPSAIANVTLTGINVPVRIGNTTVMPGDMVVG CCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECEEEEEECCEEECCCCEEEE DPEGVYFVPPHLVQQVVDNADTIHIHDEWTRKKFDEGKYKSTDIYGSPKDPALKKEYDEY CCCCEEECCHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH LQKRRAEIQKGGK HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]