| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622444
Identifier: 116622444
GI number: 116622444
Start: 4230637
End: 4231671
Strand: Direct
Name: 116622444
Synonym: Acid_3342
Alternate gene names: NA
Gene position: 4230637-4231671 (Clockwise)
Preceding gene: 116622443
Following gene: 116622445
Centisome position: 42.45
GC content: 65.7
Gene sequence:
>1035_bases ATGAGCCTCCGCATTGCGATGATCGCCGCCTTCTTCAGTGTGCCGCTTATCGCCCAGGTGGCGCCGATCCCGATCAAGGT CGTAGTGGTGACGATGTTCGAGCGCGGCGAAGACACGGGCGACGCGCCGGGCGAGTACCAACTCTGGGTGGAGCGCGAGC ATCTCGACCGCGTGATTCCGCTCGCGGCCGGTTATCGCCACGTCCGCGTCAATAAGGATGGTGTGCTCGGCATGGTCACG GGCATCGGCACGGCGAAGGCCGCGGCATCCGTGATGGCGCTCGGTATGGACCGGCGCTTCGATCTCTCCAAGGCGTATTG GGTGGTGGCGGGGATCGGCGGCGGCGATCCCGCGGACGTGTCGCTGGGCTCCGCGGTGTGGGCTGACCACGTGATCGACG GCGATATCGCGTACGAGATCGACGCGCGCGAGATCCCCGCCGACTGGCCCACCGGCATCGTGCCTTTGCGGAAACTACGG CCTTACGAGGCGCCCGTTCGCGCCGAACTCGAGGGCGAACTGTACACGCTCAATCCGGCGCTGGTCGGGTGGGCCTACCG GCTCACGAAGGATGTCGCGCTCACCGACACCGCGGCAATTCGGACAGCGCGCGCGCGGTTCACGGGATTCCCCAATGCGT TGAAGCCTCCCTTCGTGACGCACGGCGACACGATTTCCGGCAGCACGTTCTGGCATGGAACGCGCATGGATGCGTGGGCC AATGCGTGGGCGCGATACTTTAGCGGCGGCAACTACATGATCGCCGCGATGGAGGATTCGGGCACGATGCAGGCGCTCAC GTTCCTGGCCAAGGCCGGCCGCGCGGACTTCGGGCGTGTCCTGGTCCTGCGCACAGTGAGCAACTACGATCGCGAAGCGC CCGGTTCTACTCCGGCCGAGAGCCTGAAGGGGCTTGTGTTCGGCAACTACTCGGCCTATTTGCCGGCGCTTGAGGCCGCG CAGATTGTCGGCGACAAGGTGGTCCGCTACCTGGTGGAACACTGGGCCGCTTGCGAATCAACGCTTCCCCGCTAA
Upstream 100 bases:
>100_bases GGCTCATTGGCGACGCAAGTTATTTGCGGCGCGCAGCGGATGTGCAAGAGATCGCTCCCTCACGGTCGCGGTTCGCGGCA GCAGTGTTAGACTCGTGCGG
Downstream 100 bases:
>100_bases GGGGCGCGGGTTGTGTTGCAAACCAAAATAGAATACGATCTGGTTGTCGCTGAGAGGTTCCGAAAGGGGGATTCACTCGA TGCCGCTGGATCGCACGAGG
Product: purine nucleoside permease
Products: NA
Alternate protein names: Purine Nucleoside Permease Protein; Purine Nucleoside Permease Family Protein; CNT Family Concentrative Nucleoside/H+ Anitporter; Purine Nucleoside Permease Family; Purine Nucleoside Permease-Like Protein; NUP-Family Purine Nucleoside Permease; Purine Nucleoside Transporter; Inosine/Uridine-Preferring Nucleoside Hydrolase; Lipoprotein
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSLRIAMIAAFFSVPLIAQVAPIPIKVVVVTMFERGEDTGDAPGEYQLWVEREHLDRVIPLAAGYRHVRVNKDGVLGMVT GIGTAKAAASVMALGMDRRFDLSKAYWVVAGIGGGDPADVSLGSAVWADHVIDGDIAYEIDAREIPADWPTGIVPLRKLR PYEAPVRAELEGELYTLNPALVGWAYRLTKDVALTDTAAIRTARARFTGFPNALKPPFVTHGDTISGSTFWHGTRMDAWA NAWARYFSGGNYMIAAMEDSGTMQALTFLAKAGRADFGRVLVLRTVSNYDREAPGSTPAESLKGLVFGNYSAYLPALEAA QIVGDKVVRYLVEHWAACESTLPR
Sequences:
>Translated_344_residues MSLRIAMIAAFFSVPLIAQVAPIPIKVVVVTMFERGEDTGDAPGEYQLWVEREHLDRVIPLAAGYRHVRVNKDGVLGMVT GIGTAKAAASVMALGMDRRFDLSKAYWVVAGIGGGDPADVSLGSAVWADHVIDGDIAYEIDAREIPADWPTGIVPLRKLR PYEAPVRAELEGELYTLNPALVGWAYRLTKDVALTDTAAIRTARARFTGFPNALKPPFVTHGDTISGSTFWHGTRMDAWA NAWARYFSGGNYMIAAMEDSGTMQALTFLAKAGRADFGRVLVLRTVSNYDREAPGSTPAESLKGLVFGNYSAYLPALEAA QIVGDKVVRYLVEHWAACESTLPR >Mature_343_residues SLRIAMIAAFFSVPLIAQVAPIPIKVVVVTMFERGEDTGDAPGEYQLWVEREHLDRVIPLAAGYRHVRVNKDGVLGMVTG IGTAKAAASVMALGMDRRFDLSKAYWVVAGIGGGDPADVSLGSAVWADHVIDGDIAYEIDAREIPADWPTGIVPLRKLRP YEAPVRAELEGELYTLNPALVGWAYRLTKDVALTDTAAIRTARARFTGFPNALKPPFVTHGDTISGSTFWHGTRMDAWAN AWARYFSGGNYMIAAMEDSGTMQALTFLAKAGRADFGRVLVLRTVSNYDREAPGSTPAESLKGLVFGNYSAYLPALEAAQ IVGDKVVRYLVEHWAACESTLPR
Specific function: Unknown
COG id: COG5042
COG function: function code F; Purine nucleoside permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37363; Mature: 37232
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRIAMIAAFFSVPLIAQVAPIPIKVVVVTMFERGEDTGDAPGEYQLWVEREHLDRVIP CCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHH LAAGYRHVRVNKDGVLGMVTGIGTAKAAASVMALGMDRRFDLSKAYWVVAGIGGGDPADV HHCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCC SLGSAVWADHVIDGDIAYEIDAREIPADWPTGIVPLRKLRPYEAPVRAELEGELYTLNPA CCCCHHHHHHEECCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCEEEECHH LVGWAYRLTKDVALTDTAAIRTARARFTGFPNALKPPFVTHGDTISGSTFWHGTRMDAWA HHHHHHHHHCCCEECCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEECCCCCHHHH NAWARYFSGGNYMIAAMEDSGTMQALTFLAKAGRADFGRVLVLRTVSNYDREAPGSTPAE HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEHHCCCCCCCCCCCHH SLKGLVFGNYSAYLPALEAAQIVGDKVVRYLVEHWAACESTLPR HCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SLRIAMIAAFFSVPLIAQVAPIPIKVVVVTMFERGEDTGDAPGEYQLWVEREHLDRVIP CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHH LAAGYRHVRVNKDGVLGMVTGIGTAKAAASVMALGMDRRFDLSKAYWVVAGIGGGDPADV HHCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCC SLGSAVWADHVIDGDIAYEIDAREIPADWPTGIVPLRKLRPYEAPVRAELEGELYTLNPA CCCCHHHHHHEECCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCEEEECHH LVGWAYRLTKDVALTDTAAIRTARARFTGFPNALKPPFVTHGDTISGSTFWHGTRMDAWA HHHHHHHHHCCCEECCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEECCCCCHHHH NAWARYFSGGNYMIAAMEDSGTMQALTFLAKAGRADFGRVLVLRTVSNYDREAPGSTPAE HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEHHCCCCCCCCCCCHH SLKGLVFGNYSAYLPALEAAQIVGDKVVRYLVEHWAACESTLPR HCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA