| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622435
Identifier: 116622435
GI number: 116622435
Start: 4219240
End: 4220268
Strand: Direct
Name: 116622435
Synonym: Acid_3333
Alternate gene names: NA
Gene position: 4219240-4220268 (Clockwise)
Preceding gene: 116622434
Following gene: 116622437
Centisome position: 42.34
GC content: 63.56
Gene sequence:
>1029_bases ATGATCCGGCAGGTTACCGACGGCGAGTGCATCAATCATCCGACGTATTTCCTGCAGAGCTCGTTCTTTCCGGGCGATCG GGAAATGTTTTTCACGTCGTACCGCACCGGTGACGCGCAGCTATTCGAGGTGTCGCTGGTCACGGGCGATCAGCGGCGGC TGACGTGGGGAAGCCCGATACACCCATATTCGGCGGCGCTCCATCCCGATGGGCACACGCTCGTGGTGACGCGGGGCGGG GAACTGTGGGCGGTGGACCGGCTGGTGGAAAACGAGCGGATGATCTTTCAATTCCCGGGGGCGCAACTTGGGGAGTGTTC GATCAGCGCCGATGGAGAATGGTTGACGGCGGCCTTCGCGAACCTCGGCGCGCGGGGCTTGGTTGTGAGCCGCTTCGATG CGAAGGAGTCGCGGATCATCCCGTTTCCGCGGACGGTGATCCATCCGCAATTTCATCCTCTGGAGCCGGAGTGGATCGAG TTCTCGGGCGATCCGGCGCCGCGCATGCACCGCGTGCGGCGCGACGGCACGGGATTGGAGTGCCTGTATGAGCACGGCAA TGACGAGTTCATCGTGCACGAGACATTCCTGGGGCGCAGCGGGGAACTGGTATTCACGATCTGGCCGCGCGCGGTGTGCC GGATGGATTGGACGACGCGCGAGATCCGCACGATCACGGAGTACAACGCGTGGCACATTGCTCCGGACCGCGCTGGCAAA CGGATCCTTTGCGACACGAACCATCCCGACGAAGGGCTGCAGATTATCGAAGTCGCGACCGGGGCGCGGCGCGCGGTGTG CCTATCGGAATCGAGCAATCAGGGGACGCAGTGGCGGCAATCGCGCTATGCGCTGGCGGAGGATTTCGCCCACGCGCGGA ATGCGCTGAGTTGGATGGAGAATGCGGTGGATAGCGTGTACGGGCCACAGCACACGCATCCGCACCCGAGCTGGAGCAAC GACGAACGGACGGTGACGTTTGCCAGCGATCGGACGGGCGTGACGCAGGTGTACGTGGCGAAGGTGTAG
Upstream 100 bases:
>100_bases GGATTCACCCCGATTGCGGGTTCTGGATGTTGAAGCGCTCGGTGGCGGACAGGAAGATCGCGGCGCTGGCTCCGGGGCGC GATTTGTACTTGGGGATCAA
Downstream 100 bases:
>100_bases AAGCTGGCTGAGATTGGCATCGGGGGGCGTCGAGCGTGAGCGAAGAAGCCGCCTGAAAGGCGGCTGCACGGTCGAAAGCC CCACGGCGAACAACGGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MIRQVTDGECINHPTYFLQSSFFPGDREMFFTSYRTGDAQLFEVSLVTGDQRRLTWGSPIHPYSAALHPDGHTLVVTRGG ELWAVDRLVENERMIFQFPGAQLGECSISADGEWLTAAFANLGARGLVVSRFDAKESRIIPFPRTVIHPQFHPLEPEWIE FSGDPAPRMHRVRRDGTGLECLYEHGNDEFIVHETFLGRSGELVFTIWPRAVCRMDWTTREIRTITEYNAWHIAPDRAGK RILCDTNHPDEGLQIIEVATGARRAVCLSESSNQGTQWRQSRYALAEDFAHARNALSWMENAVDSVYGPQHTHPHPSWSN DERTVTFASDRTGVTQVYVAKV
Sequences:
>Translated_342_residues MIRQVTDGECINHPTYFLQSSFFPGDREMFFTSYRTGDAQLFEVSLVTGDQRRLTWGSPIHPYSAALHPDGHTLVVTRGG ELWAVDRLVENERMIFQFPGAQLGECSISADGEWLTAAFANLGARGLVVSRFDAKESRIIPFPRTVIHPQFHPLEPEWIE FSGDPAPRMHRVRRDGTGLECLYEHGNDEFIVHETFLGRSGELVFTIWPRAVCRMDWTTREIRTITEYNAWHIAPDRAGK RILCDTNHPDEGLQIIEVATGARRAVCLSESSNQGTQWRQSRYALAEDFAHARNALSWMENAVDSVYGPQHTHPHPSWSN DERTVTFASDRTGVTQVYVAKV >Mature_342_residues MIRQVTDGECINHPTYFLQSSFFPGDREMFFTSYRTGDAQLFEVSLVTGDQRRLTWGSPIHPYSAALHPDGHTLVVTRGG ELWAVDRLVENERMIFQFPGAQLGECSISADGEWLTAAFANLGARGLVVSRFDAKESRIIPFPRTVIHPQFHPLEPEWIE FSGDPAPRMHRVRRDGTGLECLYEHGNDEFIVHETFLGRSGELVFTIWPRAVCRMDWTTREIRTITEYNAWHIAPDRAGK RILCDTNHPDEGLQIIEVATGARRAVCLSESSNQGTQWRQSRYALAEDFAHARNALSWMENAVDSVYGPQHTHPHPSWSN DERTVTFASDRTGVTQVYVAKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38830; Mature: 38830
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRQVTDGECINHPTYFLQSSFFPGDREMFFTSYRTGDAQLFEVSLVTGDQRRLTWGSPI CCCCCCCCCCCCCCHHEEECCCCCCCCEEEEEEECCCCCEEEEEEEEECCCEEEECCCCC HPYSAALHPDGHTLVVTRGGELWAVDRLVENERMIFQFPGAQLGECSISADGEWLTAAFA CCCCEEECCCCCEEEEECCCCEEEEHHHHCCCEEEEECCCCCCCCEEECCCCCCHHHHHH NLGARGLVVSRFDAKESRIIPFPRTVIHPQFHPLEPEWIEFSGDPAPRMHRVRRDGTGLE HCCCCCEEEEECCCCCCEECCCCHHHCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCEE CLYEHGNDEFIVHETFLGRSGELVFTIWPRAVCRMDWTTREIRTITEYNAWHIAPDRAGK EEEECCCCEEEEEEEECCCCCCEEEEECCCEEEECCCCHHHHHEEEECCCEEECCCCCCC RILCDTNHPDEGLQIIEVATGARRAVCLSESSNQGTQWRQSRYALAEDFAHARNALSWME EEEECCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NAVDSVYGPQHTHPHPSWSNDERTVTFASDRTGVTQVYVAKV HHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEC >Mature Secondary Structure MIRQVTDGECINHPTYFLQSSFFPGDREMFFTSYRTGDAQLFEVSLVTGDQRRLTWGSPI CCCCCCCCCCCCCCHHEEECCCCCCCCEEEEEEECCCCCEEEEEEEEECCCEEEECCCCC HPYSAALHPDGHTLVVTRGGELWAVDRLVENERMIFQFPGAQLGECSISADGEWLTAAFA CCCCEEECCCCCEEEEECCCCEEEEHHHHCCCEEEEECCCCCCCCEEECCCCCCHHHHHH NLGARGLVVSRFDAKESRIIPFPRTVIHPQFHPLEPEWIEFSGDPAPRMHRVRRDGTGLE HCCCCCEEEEECCCCCCEECCCCHHHCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCEE CLYEHGNDEFIVHETFLGRSGELVFTIWPRAVCRMDWTTREIRTITEYNAWHIAPDRAGK EEEECCCCEEEEEEEECCCCCCEEEEECCCEEEECCCCHHHHHEEEECCCEEECCCCCCC RILCDTNHPDEGLQIIEVATGARRAVCLSESSNQGTQWRQSRYALAEDFAHARNALSWME EEEECCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NAVDSVYGPQHTHPHPSWSNDERTVTFASDRTGVTQVYVAKV HHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA