| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is macB1 [H]
Identifier: 116622392
GI number: 116622392
Start: 4157296
End: 4159740
Strand: Reverse
Name: macB1 [H]
Synonym: Acid_3286
Alternate gene names: 116622392
Gene position: 4159740-4157296 (Counterclockwise)
Preceding gene: 116622393
Following gene: 116622391
Centisome position: 41.74
GC content: 67.69
Gene sequence:
>2445_bases ATGAGCATCGCGAGGGCACTCGAGACATTCGCACAGGACGTCCGTTACGGCTTCCGGACTCTTCGCAGCCGCCCGGTCTT TGCAGCGACTGCGGTGGCAACCCTGGCGCTTGCCATCGGCGGCAATACCGCGATGTTCACCGTAGTGCGGGCGGTGCTGC TGCAGCCGCTGCAGTATCGCGAGCCCGACCGGCTGGTGACGATCACGGGCGGCGCCACTCCGCAGCGATTCGCGGAAATG AAGGCCGGTGCGCAGTCGTTCACGGAGATCGGCGCATTCACGGGTGTGGAAGACCTCGCGCTTTCCGGCGGCGCGGAGCC GGAGATTCTGAAGGGCGTTCATGTATCCGCCGGGTTTCTGCGAATTCTGGCGGCCGACCCGGTGCGCGGCCGCGGATTTC TTCCGGAAGAGGACAGAGCGGGAGGAGCGCCCGTAGCGATGATCAGCCACGAACTGTGGCAGCGGCGGTACGGAGGAGAT CCGCAGATCGTGGGGAAGACGGCGATGCTCTCCACCACGCCGTACACGATTGTGGGCGTGCTGCCGGGCGGCTTTCAATT CCCTGCCCCCGGCCTGGACGTGTGGTTGACGGCGCCCTCGGAATCGCCGTCGATTCCGCTCAGGTCCCGGACGCTGAGTC CTTACCTGACCCTCTTCGGACGGTTGAAAGCGGGGGTAAGCCTCGCGCAGGCGAATGCGGAGCTGCGGGTGATTCGCCAG CAGTATGCGACGGCCCACCCGGCCATGCTGGATGCAAAGGCGAAGACTCCGGTGGAGGCCGCGCCGATGAAGGAAGAGCT GGTGGCCGGAGTACGCGCCACGCTCTGGCTGCTGTTTGGCGCGGTCGGGTTTGTGCTGCTGATCGCCTGCGCGAACATCG CCGGCCTGCTGCTGGCGCGCGCCGCCTCGCGCGTGCGGGAGATGGCGGTACGCTCGGCGATCGGCGCAGCGCGCACCCGG CTGATCGGCCAGATGCTCGCGGAGAGCGTGCTTTTGTCGGCCGCCGGCGGAGTGCTCGGCGTACTGCTGGCGGCGTGGTG CCTGCGTGCGATTCCGGAGCTTCCCAGCTTCAACCTGCCGCGCGCCGGTGAAATTCGCCTGGATGGGACGGTGCTCGGAT TCGCCGCCGCACTCTCGCTGGTGACCGGGACGCTGTTCGGCCTGGCGCCCGCGCTACGCGCATCGCGACCGGACCTGATG GGAGTTTTGCGGACCAGCGGGGAGGCCGCGAACCAGGCCGGGTCGCGGGGAATTCCGAACCGGTTGACATTGCGCGGCCT ACTGCTGGTGGGACAGATCGCGCTTTCGGTGGTGCTGCTGATCGGCGCCGCGCTGTTGATGGAATCCGTGGTGCAACTGC ACCGTGTGGACGTGGGCTTCAACCCGGCGAACCTGTTGACGGCGCGCGTGGCTTTGCCGGCGCTGCGCTACGACACGGAT CTGAAGAAGGCGCTGTTCTTCCAAAGCCTGGTCCGGCAGGTTGGCGCGACACCCGGCGTTCGCGGGGCGACGGCAGCCTG GTACCTGCCCATGATGGGTTCGGCCGGAACTCCGGTGCAGGACGCGAATCAGCCGGCGCTGCGGCTGAATCAGCGGCCGA TCGCGACGCTCGTAATGATCACACCGGCATACTTTTCCACGCTCGGGATCGCCTTCCGGCGCGGCAGGGATTTTGCGGAG AGCGACACGGCGGAAGCGCAACGCGTGGCGATTATCAACGAGAGCCTGGCGCGGCGCTTCTGGCCCTCGTACCCGGCCGG CCCGGACCCGATCGGGCAGCGAATGCTGGTGGGAGGGGTAAACCCGAAACCGGCTGAGATCGTGGGCATTGTCGCCGACG TTCACCAGGGACTGGAAGGGAGCCCGTGGGCGGAAACCGTGTACCTGGCCTTCCCGCAGAATGCGCAGGGGTCGGCGGTG CTGGCGATACGGACCGCGGGAGATCCGCTGCGCTTCACGGGAGCGGTTCGCGAGCAGGTGCGGAGGCTGGACCGCGACCA ACCGGTAGCGGGCGTGCAGAGCATGGAAGACCTGGTGGAGGCGGCGGTGGGCCGGCGGAGGCTGCTGGCGCCGCTGCTTG GAGTGTTCGCCGGCGTGGCGCTGCTGCTGGCGTTGATCGGGATCTATGGAGTGATCTCGTATTCGGTGGCGCAGCGCACG CGCGAGATGGGGATCCGGCGGGCGTTGGGCGCGCAGCACCAGGACATTCTGCGGCTGGTGGTGGGACAGGGACTGGCACT GGCGGTGGCGGGAGTTGCGGTCGGGATCGGCGCGGCGTTCGCGTTGACGCGAGTGATGGAAAGCCTGTTGTTCCACGTGA GCGCCACCGACCCTGCGATTTTCGCGGGGATTGGCGCGCTGTTCCTGCTCGTGACGGCCGTGGCCTGCTACCTGCCGGCG CGACGGGCTACCAGGATCGATCCGATGGCTGCGCTGCGGGCATAA
Upstream 100 bases:
>100_bases ATCACGATCGCCCAAGCTCTTCTCAGGAAGCTTCTGCGCAACTGATCTGCGTTGGAAGGCTCGGGGTAAAATTGGTTCAC CAGCGGAGGGAGCCGGTTTG
Downstream 100 bases:
>100_bases GGACTAACCGCACCCGATTACGCCATCCGGAGAATTGAACATGCCCCAATCGGAGTGGTACTTTTCGTTGCCATAGGTAG CCGTCCTGGTCGTTCCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 814; Mature: 813
Protein sequence:
>814_residues MSIARALETFAQDVRYGFRTLRSRPVFAATAVATLALAIGGNTAMFTVVRAVLLQPLQYREPDRLVTITGGATPQRFAEM KAGAQSFTEIGAFTGVEDLALSGGAEPEILKGVHVSAGFLRILAADPVRGRGFLPEEDRAGGAPVAMISHELWQRRYGGD PQIVGKTAMLSTTPYTIVGVLPGGFQFPAPGLDVWLTAPSESPSIPLRSRTLSPYLTLFGRLKAGVSLAQANAELRVIRQ QYATAHPAMLDAKAKTPVEAAPMKEELVAGVRATLWLLFGAVGFVLLIACANIAGLLLARAASRVREMAVRSAIGAARTR LIGQMLAESVLLSAAGGVLGVLLAAWCLRAIPELPSFNLPRAGEIRLDGTVLGFAAALSLVTGTLFGLAPALRASRPDLM GVLRTSGEAANQAGSRGIPNRLTLRGLLLVGQIALSVVLLIGAALLMESVVQLHRVDVGFNPANLLTARVALPALRYDTD LKKALFFQSLVRQVGATPGVRGATAAWYLPMMGSAGTPVQDANQPALRLNQRPIATLVMITPAYFSTLGIAFRRGRDFAE SDTAEAQRVAIINESLARRFWPSYPAGPDPIGQRMLVGGVNPKPAEIVGIVADVHQGLEGSPWAETVYLAFPQNAQGSAV LAIRTAGDPLRFTGAVREQVRRLDRDQPVAGVQSMEDLVEAAVGRRRLLAPLLGVFAGVALLLALIGIYGVISYSVAQRT REMGIRRALGAQHQDILRLVVGQGLALAVAGVAVGIGAAFALTRVMESLLFHVSATDPAIFAGIGALFLLVTAVACYLPA RRATRIDPMAALRA
Sequences:
>Translated_814_residues MSIARALETFAQDVRYGFRTLRSRPVFAATAVATLALAIGGNTAMFTVVRAVLLQPLQYREPDRLVTITGGATPQRFAEM KAGAQSFTEIGAFTGVEDLALSGGAEPEILKGVHVSAGFLRILAADPVRGRGFLPEEDRAGGAPVAMISHELWQRRYGGD PQIVGKTAMLSTTPYTIVGVLPGGFQFPAPGLDVWLTAPSESPSIPLRSRTLSPYLTLFGRLKAGVSLAQANAELRVIRQ QYATAHPAMLDAKAKTPVEAAPMKEELVAGVRATLWLLFGAVGFVLLIACANIAGLLLARAASRVREMAVRSAIGAARTR LIGQMLAESVLLSAAGGVLGVLLAAWCLRAIPELPSFNLPRAGEIRLDGTVLGFAAALSLVTGTLFGLAPALRASRPDLM GVLRTSGEAANQAGSRGIPNRLTLRGLLLVGQIALSVVLLIGAALLMESVVQLHRVDVGFNPANLLTARVALPALRYDTD LKKALFFQSLVRQVGATPGVRGATAAWYLPMMGSAGTPVQDANQPALRLNQRPIATLVMITPAYFSTLGIAFRRGRDFAE SDTAEAQRVAIINESLARRFWPSYPAGPDPIGQRMLVGGVNPKPAEIVGIVADVHQGLEGSPWAETVYLAFPQNAQGSAV LAIRTAGDPLRFTGAVREQVRRLDRDQPVAGVQSMEDLVEAAVGRRRLLAPLLGVFAGVALLLALIGIYGVISYSVAQRT REMGIRRALGAQHQDILRLVVGQGLALAVAGVAVGIGAAFALTRVMESLLFHVSATDPAIFAGIGALFLLVTAVACYLPA RRATRIDPMAALRA >Mature_813_residues SIARALETFAQDVRYGFRTLRSRPVFAATAVATLALAIGGNTAMFTVVRAVLLQPLQYREPDRLVTITGGATPQRFAEMK AGAQSFTEIGAFTGVEDLALSGGAEPEILKGVHVSAGFLRILAADPVRGRGFLPEEDRAGGAPVAMISHELWQRRYGGDP QIVGKTAMLSTTPYTIVGVLPGGFQFPAPGLDVWLTAPSESPSIPLRSRTLSPYLTLFGRLKAGVSLAQANAELRVIRQQ YATAHPAMLDAKAKTPVEAAPMKEELVAGVRATLWLLFGAVGFVLLIACANIAGLLLARAASRVREMAVRSAIGAARTRL IGQMLAESVLLSAAGGVLGVLLAAWCLRAIPELPSFNLPRAGEIRLDGTVLGFAAALSLVTGTLFGLAPALRASRPDLMG VLRTSGEAANQAGSRGIPNRLTLRGLLLVGQIALSVVLLIGAALLMESVVQLHRVDVGFNPANLLTARVALPALRYDTDL KKALFFQSLVRQVGATPGVRGATAAWYLPMMGSAGTPVQDANQPALRLNQRPIATLVMITPAYFSTLGIAFRRGRDFAES DTAEAQRVAIINESLARRFWPSYPAGPDPIGQRMLVGGVNPKPAEIVGIVADVHQGLEGSPWAETVYLAFPQNAQGSAVL AIRTAGDPLRFTGAVREQVRRLDRDQPVAGVQSMEDLVEAAVGRRRLLAPLLGVFAGVALLLALIGIYGVISYSVAQRTR EMGIRRALGAQHQDILRLVVGQGLALAVAGVAVGIGAAFALTRVMESLLFHVSATDPAIFAGIGALFLLVTAVACYLPAR RATRIDPMAALRA
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=307, Percent_Identity=25.4071661237785, Blast_Score=80, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 85967; Mature: 85836
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIARALETFAQDVRYGFRTLRSRPVFAATAVATLALAIGGNTAMFTVVRAVLLQPLQYR CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHCC EPDRLVTITGGATPQRFAEMKAGAQSFTEIGAFTGVEDLALSGGAEPEILKGVHVSAGFL CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHCCCHHHHHH RILAADPVRGRGFLPEEDRAGGAPVAMISHELWQRRYGGDPQIVGKTAMLSTTPYTIVGV HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCEEEECCCCEEEEEE LPGGFQFPAPGLDVWLTAPSESPSIPLRSRTLSPYLTLFGRLKAGVSLAQANAELRVIRQ CCCCCCCCCCCCEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHCHHHHHCCHHHHHHHH QYATAHPAMLDAKAKTPVEAAPMKEELVAGVRATLWLLFGAVGFVLLIACANIAGLLLAR HHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AASRVREMAVRSAIGAARTRLIGQMLAESVLLSAAGGVLGVLLAAWCLRAIPELPSFNLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC RAGEIRLDGTVLGFAAALSLVTGTLFGLAPALRASRPDLMGVLRTSGEAANQAGSRGIPN CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCCCCCCC RLTLRGLLLVGQIALSVVLLIGAALLMESVVQLHRVDVGFNPANLLTARVALPALRYDTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHH LKKALFFQSLVRQVGATPGVRGATAAWYLPMMGSAGTPVQDANQPALRLNQRPIATLVMI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEEEE TPAYFSTLGIAFRRGRDFAESDTAEAQRVAIINESLARRFWPSYPAGPDPIGQRMLVGGV CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC NPKPAEIVGIVADVHQGLEGSPWAETVYLAFPQNAQGSAVLAIRTAGDPLRFTGAVREQV CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHH RRLDRDQPVAGVQSMEDLVEAAVGRRRLLAPLLGVFAGVALLLALIGIYGVISYSVAQRT HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REMGIRRALGAQHQDILRLVVGQGLALAVAGVAVGIGAAFALTRVMESLLFHVSATDPAI HHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FAGIGALFLLVTAVACYLPARRATRIDPMAALRA HHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHCC >Mature Secondary Structure SIARALETFAQDVRYGFRTLRSRPVFAATAVATLALAIGGNTAMFTVVRAVLLQPLQYR CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHCC EPDRLVTITGGATPQRFAEMKAGAQSFTEIGAFTGVEDLALSGGAEPEILKGVHVSAGFL CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHCCCHHHHHH RILAADPVRGRGFLPEEDRAGGAPVAMISHELWQRRYGGDPQIVGKTAMLSTTPYTIVGV HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCEEEECCCCEEEEEE LPGGFQFPAPGLDVWLTAPSESPSIPLRSRTLSPYLTLFGRLKAGVSLAQANAELRVIRQ CCCCCCCCCCCCEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHCHHHHHCCHHHHHHHH QYATAHPAMLDAKAKTPVEAAPMKEELVAGVRATLWLLFGAVGFVLLIACANIAGLLLAR HHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AASRVREMAVRSAIGAARTRLIGQMLAESVLLSAAGGVLGVLLAAWCLRAIPELPSFNLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC RAGEIRLDGTVLGFAAALSLVTGTLFGLAPALRASRPDLMGVLRTSGEAANQAGSRGIPN CCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCCCCCCC RLTLRGLLLVGQIALSVVLLIGAALLMESVVQLHRVDVGFNPANLLTARVALPALRYDTD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHH LKKALFFQSLVRQVGATPGVRGATAAWYLPMMGSAGTPVQDANQPALRLNQRPIATLVMI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEEEE TPAYFSTLGIAFRRGRDFAESDTAEAQRVAIINESLARRFWPSYPAGPDPIGQRMLVGGV CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC NPKPAEIVGIVADVHQGLEGSPWAETVYLAFPQNAQGSAVLAIRTAGDPLRFTGAVREQV CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHH RRLDRDQPVAGVQSMEDLVEAAVGRRRLLAPLLGVFAGVALLLALIGIYGVISYSVAQRT HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REMGIRRALGAQHQDILRLVVGQGLALAVAGVAVGIGAAFALTRVMESLLFHVSATDPAI HHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FAGIGALFLLVTAVACYLPARRATRIDPMAALRA HHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA