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The map label for this gene is yfgC [H]

Identifier: 116622360

GI number: 116622360

Start: 4118397

End: 4119404

Strand: Direct

Name: yfgC [H]

Synonym: Acid_3254

Alternate gene names: 116622360

Gene position: 4118397-4119404 (Clockwise)

Preceding gene: 116622359

Following gene: 116622363

Centisome position: 41.33

GC content: 59.42

Gene sequence:

>1008_bases
ATGATACTTCGCTTTCGAGCCCCCGTGGCAATCCTGGCGTCCCTCAGTCTGCTGTCTGTGGGAAGTTTCGCCGGCGACAA
GAAAAAACAGGATCCGGAAGAGATCGGCAATCGCGACGTCGGTAAGGGCGTAAACTTCTACTCGCTGGAGAAGGAGATCG
CTCTTGGCAAACAGTTGGCGCAGGAAGTGGAGCGTCAGGCCAAAATCATCGACGATCCGATCATTGCGGAATACGTCAAC
CGTGTGGGCCAGAACCTCGTCCGTAATTCGGACGCCAAGGTGCCCTTCACCATCAAGGTGCTCGATTCCGAAGAGGTCAA
CGCTTTCGCTCTGCCTGGCGGTTTCTTTTTCGTCAACTCGGGCCTGATGCTCAAGGCCGAATCCGAAGCCGAGCTCGCCG
GCGTGATGGCGCATGAGATCGCCCACGTCGCCGCGCGCCACGGCACCAAGCAGGCTACCAAAGGCGAAATTGCGAATATT
GCCACCATTCCCCTGATCTTCATGGGCGGCTGGGCCGGGTACGCTATCCGGCAGGGCGCGGGCCTCGCCATCCCGCTGGG
CTTCCTGAAGTTCTCCCAGGCGATGGAGTCCGAAGCCGACTACCTTGGCCTGCAGTACCTTTATAAGTCCGGCTACGACC
CCACCGCGTTTGTCGATTTCTTCGAAAAGATCCAGTCGCTGGAAAAGAAGAAGCCGGGCACGCTGGCCAAGATCTTCTCC
AGCCATCCTCCCACCGATAATCGCATCAAGAGCGCCCAGACGGAGATCCAGAAGATCCTGGTGGCCAAGCCCGAGTACGT
GGTCAACACCAGCGAATTTAACGATGTGAAGAACCGCCTGGCGATGCTGCACAACCGCCGCAAGGTCGATGTGGACAAGG
ATTCCAACCGTCCCCGCCTCCGCCGCGCGCCCGGCAGCACCACTGGTCCCGTCGATGAAAACGAAGACGGCACCAAGCCC
AAGACCGACCAGGACGAGCGCCCGACCTTAAAGCGCCGCGACGGCTAA

Upstream 100 bases:

>100_bases
ATTCGAAACCGGAAGCGCCCGCGGCACGTTTAAAGTACAGGACTGTATGCCGGGTGCTCGCGATTCGGCGTATAGTGTAG
CTATCAGGAGTTGGCGGACA

Downstream 100 bases:

>100_bases
AGAATTTCGGGCCGCAGATGAACGCAGATAAACGCAGATAAGAAGAAGCATTGTTTTATCCGCGTTGATCCGTGTTCATC
CGCGGCCCATTTCTGCTTTA

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MILRFRAPVAILASLSLLSVGSFAGDKKKQDPEEIGNRDVGKGVNFYSLEKEIALGKQLAQEVERQAKIIDDPIIAEYVN
RVGQNLVRNSDAKVPFTIKVLDSEEVNAFALPGGFFFVNSGLMLKAESEAELAGVMAHEIAHVAARHGTKQATKGEIANI
ATIPLIFMGGWAGYAIRQGAGLAIPLGFLKFSQAMESEADYLGLQYLYKSGYDPTAFVDFFEKIQSLEKKKPGTLAKIFS
SHPPTDNRIKSAQTEIQKILVAKPEYVVNTSEFNDVKNRLAMLHNRRKVDVDKDSNRPRLRRAPGSTTGPVDENEDGTKP
KTDQDERPTLKRRDG

Sequences:

>Translated_335_residues
MILRFRAPVAILASLSLLSVGSFAGDKKKQDPEEIGNRDVGKGVNFYSLEKEIALGKQLAQEVERQAKIIDDPIIAEYVN
RVGQNLVRNSDAKVPFTIKVLDSEEVNAFALPGGFFFVNSGLMLKAESEAELAGVMAHEIAHVAARHGTKQATKGEIANI
ATIPLIFMGGWAGYAIRQGAGLAIPLGFLKFSQAMESEADYLGLQYLYKSGYDPTAFVDFFEKIQSLEKKKPGTLAKIFS
SHPPTDNRIKSAQTEIQKILVAKPEYVVNTSEFNDVKNRLAMLHNRRKVDVDKDSNRPRLRRAPGSTTGPVDENEDGTKP
KTDQDERPTLKRRDG
>Mature_335_residues
MILRFRAPVAILASLSLLSVGSFAGDKKKQDPEEIGNRDVGKGVNFYSLEKEIALGKQLAQEVERQAKIIDDPIIAEYVN
RVGQNLVRNSDAKVPFTIKVLDSEEVNAFALPGGFFFVNSGLMLKAESEAELAGVMAHEIAHVAARHGTKQATKGEIANI
ATIPLIFMGGWAGYAIRQGAGLAIPLGFLKFSQAMESEADYLGLQYLYKSGYDPTAFVDFFEKIQSLEKKKPGTLAKIFS
SHPPTDNRIKSAQTEIQKILVAKPEYVVNTSEFNDVKNRLAMLHNRRKVDVDKDSNRPRLRRAPGSTTGPVDENEDGTKP
KTDQDERPTLKRRDG

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=257, Percent_Identity=29.5719844357977, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI87082185, Length=199, Percent_Identity=31.1557788944724, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081800, Length=223, Percent_Identity=30.0448430493274, Blast_Score=65, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6322940, Length=157, Percent_Identity=30.5732484076433, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 36948; Mature: 36948

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILRFRAPVAILASLSLLSVGSFAGDKKKQDPEEIGNRDVGKGVNFYSLEKEIALGKQLA
CEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QEVERQAKIIDDPIIAEYVNRVGQNLVRNSDAKVPFTIKVLDSEEVNAFALPGGFFFVNS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCEEEECC
GLMLKAESEAELAGVMAHEIAHVAARHGTKQATKGEIANIATIPLIFMGGWAGYAIRQGA
CEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEECCCHHHHHHCCC
GLAIPLGFLKFSQAMESEADYLGLQYLYKSGYDPTAFVDFFEKIQSLEKKKPGTLAKIFS
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
SHPPTDNRIKSAQTEIQKILVAKPEYVVNTSEFNDVKNRLAMLHNRRKVDVDKDSNRPRL
CCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
RRAPGSTTGPVDENEDGTKPKTDQDERPTLKRRDG
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MILRFRAPVAILASLSLLSVGSFAGDKKKQDPEEIGNRDVGKGVNFYSLEKEIALGKQLA
CEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QEVERQAKIIDDPIIAEYVNRVGQNLVRNSDAKVPFTIKVLDSEEVNAFALPGGFFFVNS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCEEEECC
GLMLKAESEAELAGVMAHEIAHVAARHGTKQATKGEIANIATIPLIFMGGWAGYAIRQGA
CEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEECCCHHHHHHCCC
GLAIPLGFLKFSQAMESEADYLGLQYLYKSGYDPTAFVDFFEKIQSLEKKKPGTLAKIFS
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
SHPPTDNRIKSAQTEIQKILVAKPEYVVNTSEFNDVKNRLAMLHNRRKVDVDKDSNRPRL
CCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE
RRAPGSTTGPVDENEDGTKPKTDQDERPTLKRRDG
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]