| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622333
Identifier: 116622333
GI number: 116622333
Start: 4083411
End: 4085111
Strand: Direct
Name: 116622333
Synonym: Acid_3227
Alternate gene names: NA
Gene position: 4083411-4085111 (Clockwise)
Preceding gene: 116622332
Following gene: 116622334
Centisome position: 40.97
GC content: 61.38
Gene sequence:
>1701_bases ATGTTCGTTTTACGCGGCACCGTTCTTGCGGCAGCTCTGATGCTGCTCGCCTGTGGCCAAAAGAGCCCGCAATCATCCAC GCAGAATCCGGAATCCGTCATCATTTACACGGCGAACGGCTGGACGCAGCCGGAGCGCGACCAATACTATCATCTGGCCG AGGGCAGCGAACTCATGTCGTACGCGTTGCTCGCAAACGTGAAGAGCGTACGCACCGGCAAGCCTTTTCTCGAAGGCATG GAGCGTTTCGGCTTTCTGCCGGATCATGCCGGTCCGGGGAACCCGTACGGTCTGCCCGTCGGCCTCACCGTATCCAAGTC CAGAAACGCCGGCACGGCCGGGCTGGAGATCGTGGGCTTCAATTGCGCGGCCTGCCATGTCGGCGAGCTGACCTATCAGG GCAAGCACGTCCGTATCGATGGAGCGCCGTCCCTGACGAACCTTCAGGCCTACCAGATCGAGTTCAAGGACTCGCTCGAT GCCGCGCTCAAAAATCCCCGGGAACTGGTGGCGCTCGTCATCGCCATGGAGAAACAGCGCAACACGCCGGGTACGCCGTC CGGCCAGGAGGCGGATAAGTATGCCGCCGAGCCGGTCGCCCAGTCCGCGGGAAATGTCGAAGCCGCCCCGACCGCGGATG CCTCCTTTCACTCCGTTTCTTCGGCGGCCGCGGATGCAGCGTCGCGCCCGCCCGCCTCAAGCTTCGACGAGCGCCTCAAG ACCGACATCGCGATTCTCAAGGCGCGGCTGGCCTATCTCAAGAATGGAAAGTTGATTGTCGATGGCACCGAGCCGGGACC AGGACGCGTGGACGCGTTTGGCGCGGCCCGCAACTTACTCTTTCCGCAGTACGCCGTGAAGATGCAATCTCCCGTCAGTT TCCCCTTCATCTGGAGCGTCCCCGATAACATCGGCCGCAAGCCCGCGGACTTTACGTGGATTCACTATGACGGCAACACC AATTCCATCCTGGAGCGAAACATCGGGCAAGCCCTCGGCATGGGCGCCGTCTTCGATCCGAAGACTTACCAATCCACCTT GCGGATCGCCAACCTCCACACCATGGAGGTACTGACTCACAAATTGCAGCCTCCCAACTGGCCGGCCGAAGTGCTGGGTG CGATCGATGAGGCCAAAGCGCAGCAAGGCCAGCAGATCTTCGCCGAAAAGTGCGCCGGATGTCATCAGGACAAGCTGTAC CCGCAAATGCAAATCGCCACCGACCCCAATCGCGCCAACAGCTTCGGACAGCCCGTCGGCAAGATCTCCTTTCCCCTGGC GGTTGCGCCGATCCTCGGCGGATTGAAAAAGCGCGCCTTCGCCGACGATGCCATCAGTCCCGCGGAGCAGGCCGGCATGG ATGCAACGCCGGTAGTCTGGCGTGCTACCGGTCAGTATCTGGCGCGCCCGCTGAAAGGCGTCTGGGCCACCGCCCCCTTC CTGCACAACGGCTCGGTACCCACTCTCTACGACTTGCTGCATCCGGACGCGCGCCCCGCCAAATTCATCGTCGGAAATCG GGAGTTCGATCCCGCGAAGATCGGCTATCGCAGCGACATGAACTCCACGGGTTCCAATGTGTGGACCTACGACACCACGC AGCCGGGCAACAGCAATATCGGGCACAGCGGCGATGCATTCGGCACGTCTCTTCCGGAAGATCAGAAAGCCGCGTTGCTC GAATACCTGAAGAAACTATAA
Upstream 100 bases:
>100_bases CTGTCCCAATTCTGATGCCCGGAACGCGCTTGATAACGGCCACACCATCGGCTACGTCGATTTACATCCCTTCGGCTGCC GCTCAACGTATAATCACGCA
Downstream 100 bases:
>100_bases CCAGCCCGACTGTATGGCCCGTGAACTTACCCTTCGCATCATCATCGAGCAGCCGCCGCCCGGTGTTGATTTCGGACTGC AGAAAGGCAGCGGCAGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 566; Mature: 566
Protein sequence:
>566_residues MFVLRGTVLAAALMLLACGQKSPQSSTQNPESVIIYTANGWTQPERDQYYHLAEGSELMSYALLANVKSVRTGKPFLEGM ERFGFLPDHAGPGNPYGLPVGLTVSKSRNAGTAGLEIVGFNCAACHVGELTYQGKHVRIDGAPSLTNLQAYQIEFKDSLD AALKNPRELVALVIAMEKQRNTPGTPSGQEADKYAAEPVAQSAGNVEAAPTADASFHSVSSAAADAASRPPASSFDERLK TDIAILKARLAYLKNGKLIVDGTEPGPGRVDAFGAARNLLFPQYAVKMQSPVSFPFIWSVPDNIGRKPADFTWIHYDGNT NSILERNIGQALGMGAVFDPKTYQSTLRIANLHTMEVLTHKLQPPNWPAEVLGAIDEAKAQQGQQIFAEKCAGCHQDKLY PQMQIATDPNRANSFGQPVGKISFPLAVAPILGGLKKRAFADDAISPAEQAGMDATPVVWRATGQYLARPLKGVWATAPF LHNGSVPTLYDLLHPDARPAKFIVGNREFDPAKIGYRSDMNSTGSNVWTYDTTQPGNSNIGHSGDAFGTSLPEDQKAALL EYLKKL
Sequences:
>Translated_566_residues MFVLRGTVLAAALMLLACGQKSPQSSTQNPESVIIYTANGWTQPERDQYYHLAEGSELMSYALLANVKSVRTGKPFLEGM ERFGFLPDHAGPGNPYGLPVGLTVSKSRNAGTAGLEIVGFNCAACHVGELTYQGKHVRIDGAPSLTNLQAYQIEFKDSLD AALKNPRELVALVIAMEKQRNTPGTPSGQEADKYAAEPVAQSAGNVEAAPTADASFHSVSSAAADAASRPPASSFDERLK TDIAILKARLAYLKNGKLIVDGTEPGPGRVDAFGAARNLLFPQYAVKMQSPVSFPFIWSVPDNIGRKPADFTWIHYDGNT NSILERNIGQALGMGAVFDPKTYQSTLRIANLHTMEVLTHKLQPPNWPAEVLGAIDEAKAQQGQQIFAEKCAGCHQDKLY PQMQIATDPNRANSFGQPVGKISFPLAVAPILGGLKKRAFADDAISPAEQAGMDATPVVWRATGQYLARPLKGVWATAPF LHNGSVPTLYDLLHPDARPAKFIVGNREFDPAKIGYRSDMNSTGSNVWTYDTTQPGNSNIGHSGDAFGTSLPEDQKAALL EYLKKL >Mature_566_residues MFVLRGTVLAAALMLLACGQKSPQSSTQNPESVIIYTANGWTQPERDQYYHLAEGSELMSYALLANVKSVRTGKPFLEGM ERFGFLPDHAGPGNPYGLPVGLTVSKSRNAGTAGLEIVGFNCAACHVGELTYQGKHVRIDGAPSLTNLQAYQIEFKDSLD AALKNPRELVALVIAMEKQRNTPGTPSGQEADKYAAEPVAQSAGNVEAAPTADASFHSVSSAAADAASRPPASSFDERLK TDIAILKARLAYLKNGKLIVDGTEPGPGRVDAFGAARNLLFPQYAVKMQSPVSFPFIWSVPDNIGRKPADFTWIHYDGNT NSILERNIGQALGMGAVFDPKTYQSTLRIANLHTMEVLTHKLQPPNWPAEVLGAIDEAKAQQGQQIFAEKCAGCHQDKLY PQMQIATDPNRANSFGQPVGKISFPLAVAPILGGLKKRAFADDAISPAEQAGMDATPVVWRATGQYLARPLKGVWATAPF LHNGSVPTLYDLLHPDARPAKFIVGNREFDPAKIGYRSDMNSTGSNVWTYDTTQPGNSNIGHSGDAFGTSLPEDQKAALL EYLKKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60922; Mature: 60922
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVLRGTVLAAALMLLACGQKSPQSSTQNPESVIIYTANGWTQPERDQYYHLAEGSELMS CEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCHHHHH YALLANVKSVRTGKPFLEGMERFGFLPDHAGPGNPYGLPVGLTVSKSRNAGTAGLEIVGF HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEC NCAACHVGELTYQGKHVRIDGAPSLTNLQAYQIEFKDSLDAALKNPRELVALVIAMEKQR CCCEEEECCEEECCCEEEECCCCCCCCCEEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHC NTPGTPSGQEADKYAAEPVAQSAGNVEAAPTADASFHSVSSAAADAASRPPASSFDERLK CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH TDIAILKARLAYLKNGKLIVDGTEPGPGRVDAFGAARNLLFPQYAVKMQSPVSFPFIWSV HHHHHHHHHHHHHCCCCEEEECCCCCCCCEEHHHHHHHHCCHHHHHHHCCCCCCCEEECC PDNIGRKPADFTWIHYDGNTNSILERNIGQALGMGAVFDPKTYQSTLRIANLHTMEVLTH CHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH KLQPPNWPAEVLGAIDEAKAQQGQQIFAEKCAGCHQDKLYPQMQIATDPNRANSFGQPVG HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEECCCCCCCCCCCCCC KISFPLAVAPILGGLKKRAFADDAISPAEQAGMDATPVVWRATGQYLARPLKGVWATAPF CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCE LHNGSVPTLYDLLHPDARPAKFIVGNREFDPAKIGYRSDMNSTGSNVWTYDTTQPGNSNI EECCCCCHHHHHHCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCC GHSGDAFGTSLPEDQKAALLEYLKKL CCCCCCCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure MFVLRGTVLAAALMLLACGQKSPQSSTQNPESVIIYTANGWTQPERDQYYHLAEGSELMS CEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCHHHHH YALLANVKSVRTGKPFLEGMERFGFLPDHAGPGNPYGLPVGLTVSKSRNAGTAGLEIVGF HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEC NCAACHVGELTYQGKHVRIDGAPSLTNLQAYQIEFKDSLDAALKNPRELVALVIAMEKQR CCCEEEECCEEECCCEEEECCCCCCCCCEEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHC NTPGTPSGQEADKYAAEPVAQSAGNVEAAPTADASFHSVSSAAADAASRPPASSFDERLK CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH TDIAILKARLAYLKNGKLIVDGTEPGPGRVDAFGAARNLLFPQYAVKMQSPVSFPFIWSV HHHHHHHHHHHHHCCCCEEEECCCCCCCCEEHHHHHHHHCCHHHHHHHCCCCCCCEEECC PDNIGRKPADFTWIHYDGNTNSILERNIGQALGMGAVFDPKTYQSTLRIANLHTMEVLTH CHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH KLQPPNWPAEVLGAIDEAKAQQGQQIFAEKCAGCHQDKLYPQMQIATDPNRANSFGQPVG HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEECCCCCCCCCCCCCC KISFPLAVAPILGGLKKRAFADDAISPAEQAGMDATPVVWRATGQYLARPLKGVWATAPF CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCE LHNGSVPTLYDLLHPDARPAKFIVGNREFDPAKIGYRSDMNSTGSNVWTYDTTQPGNSNI EECCCCCHHHHHHCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCC GHSGDAFGTSLPEDQKAALLEYLKKL CCCCCCCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]