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The map label for this gene is 116622322

Identifier: 116622322

GI number: 116622322

Start: 4069776

End: 4070414

Strand: Direct

Name: 116622322

Synonym: Acid_3216

Alternate gene names: NA

Gene position: 4069776-4070414 (Clockwise)

Preceding gene: 116622319

Following gene: 116622323

Centisome position: 40.84

GC content: 62.91

Gene sequence:

>639_bases
GTGCGGATCACCCACTGGGTCGGCACGCTCAGCTTCCTCGGCCTGCTCATCAGCGGAATTGGCATCCTGCTCTCGCACCC
GCGGTTTTATTGGGGAGAGACCGGAGGCGTCGGAACTCCCTCGCTGTTCGATTTGCCGCTGCCCTTCATGCTCGGCGGAC
CCTCGGGTTGGGGCCGCTATCTCCACTTTCAATCGGCATGGGTCTTCATCCCGAATCTGGTGGTCTACGTCGCCACCAGC
TTCGCCAGCCGTCATTTTCAGAAGGACCTCATACCCGCAAAGGGAACCTTGAGCTGGCCGCAACTACGCCGCCACCTCTT
CCTCGAGCGCCCCGGTCCCGACGAGGAGCACACGTACAACGTCCTCCAGCGGATCGCCTATTTGATGGTCGTCTTCTTTC
TCTTCCCGCTGCTCGTCTGGACCGGCTTCGCGATGTCCCCCGCGCTCACGTCCGTGTTCCCGTGGCTGGTTGATTCGCTG
GGCGGCCACCAGACCGCGCGCACCCTGCACTTCTTTGTGTCGATTGCGTTGGTTCTTTTCGTGTTGGTGCATGCCGCCAT
GGTCTGGCGCGCCGGCTTTCGACGCCGCGTCGGGGCCATGATTACGGGCCGCGTCGGTCCCGCCAAGGAGGATGCATGA

Upstream 100 bases:

>100_bases
CCGTGATATTATCTCATCTGCCATGGCCGATTCCGTGTACACTCCGGGACTTATCGCGCGGAGTCCGGATCTTCCGGATA
CGCGGAGACACTCCGCGGTA

Downstream 100 bases:

>100_bases
GCGACTTACTTTCCCGGCGTAAGTGGATGACAGCCGGAATCAGTGCTGCCGGGGTGGCCGTGGCGGCGCGCCTCGCCGAT
CGCTTCGGACTCATACCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane B-Type Cytochrome Protein; HupC/HyaC/HydC Family Protein; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; Cytochrome B/B6 Domain Protein; Transmembrane Cytochrome B-Type Protein

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MRITHWVGTLSFLGLLISGIGILLSHPRFYWGETGGVGTPSLFDLPLPFMLGGPSGWGRYLHFQSAWVFIPNLVVYVATS
FASRHFQKDLIPAKGTLSWPQLRRHLFLERPGPDEEHTYNVLQRIAYLMVVFFLFPLLVWTGFAMSPALTSVFPWLVDSL
GGHQTARTLHFFVSIALVLFVLVHAAMVWRAGFRRRVGAMITGRVGPAKEDA

Sequences:

>Translated_212_residues
MRITHWVGTLSFLGLLISGIGILLSHPRFYWGETGGVGTPSLFDLPLPFMLGGPSGWGRYLHFQSAWVFIPNLVVYVATS
FASRHFQKDLIPAKGTLSWPQLRRHLFLERPGPDEEHTYNVLQRIAYLMVVFFLFPLLVWTGFAMSPALTSVFPWLVDSL
GGHQTARTLHFFVSIALVLFVLVHAAMVWRAGFRRRVGAMITGRVGPAKEDA
>Mature_212_residues
MRITHWVGTLSFLGLLISGIGILLSHPRFYWGETGGVGTPSLFDLPLPFMLGGPSGWGRYLHFQSAWVFIPNLVVYVATS
FASRHFQKDLIPAKGTLSWPQLRRHLFLERPGPDEEHTYNVLQRIAYLMVVFFLFPLLVWTGFAMSPALTSVFPWLVDSL
GGHQTARTLHFFVSIALVLFVLVHAAMVWRAGFRRRVGAMITGRVGPAKEDA

Specific function: Unknown

COG id: COG4117

COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23808; Mature: 23808

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITHWVGTLSFLGLLISGIGILLSHPRFYWGETGGVGTPSLFDLPLPFMLGGPSGWGRY
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCEECCCCCCHHH
LHFQSAWVFIPNLVVYVATSFASRHFQKDLIPAKGTLSWPQLRRHLFLERPGPDEEHTYN
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHH
VLQRIAYLMVVFFLFPLLVWTGFAMSPALTSVFPWLVDSLGGHQTARTLHFFVSIALVLF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VLVHAAMVWRAGFRRRVGAMITGRVGPAKEDA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRITHWVGTLSFLGLLISGIGILLSHPRFYWGETGGVGTPSLFDLPLPFMLGGPSGWGRY
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCEECCCCCCHHH
LHFQSAWVFIPNLVVYVATSFASRHFQKDLIPAKGTLSWPQLRRHLFLERPGPDEEHTYN
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHH
VLQRIAYLMVVFFLFPLLVWTGFAMSPALTSVFPWLVDSLGGHQTARTLHFFVSIALVLF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VLVHAAMVWRAGFRRRVGAMITGRVGPAKEDA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA