| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116622301
Identifier: 116622301
GI number: 116622301
Start: 4044066
End: 4044698
Strand: Direct
Name: 116622301
Synonym: Acid_3195
Alternate gene names: NA
Gene position: 4044066-4044698 (Clockwise)
Preceding gene: 116622300
Following gene: 116622302
Centisome position: 40.58
GC content: 63.82
Gene sequence:
>633_bases GTGGCCCGCCGCATCGAGTCGCATCATTTGGCCGGCCCGGCCGGAGTGCTGGAATCCTTACTGGAAGAGCCCGATCATCG CGAAGCGCGCGGGGTCGCGGTGCTCTGCCATCCACACCCGCTGTATGGCGGCACGATGCACAATAAAGTGGTCTATCGGA TGGCCCGGGGACTGCGCCGGGCGGGCTTCGTTGTGCTGCGCTTCAACTTTCGCGGAGTCGGCGCGAGCGAGGGCGAGCAT GCGCACCTGGAGGGTGAAATCGAAGACGCCCGGGCGGCGCTGGCGTGGTTGAGAGATCGGTATCTGGAACTGCCCTACGC GCTCGCCGGCTTCAGCTTCGGCTCGCGCGTGATCACGAGGCTGGGGTGCGCGGTGCCGGGCGCGGTCTTTCTGATGGCCG CCGGATTTCCGACGCGCTGGGGTCCGCCGGAGCACCTGGAGTCCTGCCGCGTTCCTAAGATTTTCATCCAGAGCACGAAT GACCAGTATGGACCACGGATGGAACTCGAAGAGATGTACCAAGGCTTCGCAGCACCCAAGGAGATCCATTGGATCGAGGC CAGCGATCACTTTTTCGCAGGGGCTTTGGATGCGTTGGAAGAGCAGGTTTTCCGCGCGGCGGAAGGGTACTGA
Upstream 100 bases:
>100_bases GGGAAAGATCGCGACACGCTGCAATCGGCGATCGCGCTGCTGCGCGGCAGCGATTTCGGCATTGACATGCAGTTCACCAA CTACCGCACGAATTAGCCGC
Downstream 100 bases:
>100_bases TATGATGGTCTATATATGGCCCAACTGAGATTGACGGCCGTGTTTATGGAAGTGCCCGAGGGCTGGATAGGGTTCGTGGA AGAATTGCCCGGGGCGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MARRIESHHLAGPAGVLESLLEEPDHREARGVAVLCHPHPLYGGTMHNKVVYRMARGLRRAGFVVLRFNFRGVGASEGEH AHLEGEIEDARAALAWLRDRYLELPYALAGFSFGSRVITRLGCAVPGAVFLMAAGFPTRWGPPEHLESCRVPKIFIQSTN DQYGPRMELEEMYQGFAAPKEIHWIEASDHFFAGALDALEEQVFRAAEGY
Sequences:
>Translated_210_residues MARRIESHHLAGPAGVLESLLEEPDHREARGVAVLCHPHPLYGGTMHNKVVYRMARGLRRAGFVVLRFNFRGVGASEGEH AHLEGEIEDARAALAWLRDRYLELPYALAGFSFGSRVITRLGCAVPGAVFLMAAGFPTRWGPPEHLESCRVPKIFIQSTN DQYGPRMELEEMYQGFAAPKEIHWIEASDHFFAGALDALEEQVFRAAEGY >Mature_209_residues ARRIESHHLAGPAGVLESLLEEPDHREARGVAVLCHPHPLYGGTMHNKVVYRMARGLRRAGFVVLRFNFRGVGASEGEHA HLEGEIEDARAALAWLRDRYLELPYALAGFSFGSRVITRLGCAVPGAVFLMAAGFPTRWGPPEHLESCRVPKIFIQSTND QYGPRMELEEMYQGFAAPKEIHWIEASDHFFAGALDALEEQVFRAAEGY
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 23427; Mature: 23296
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRIESHHLAGPAGVLESLLEEPDHREARGVAVLCHPHPLYGGTMHNKVVYRMARGLRR CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH AGFVVLRFNFRGVGASEGEHAHLEGEIEDARAALAWLRDRYLELPYALAGFSFGSRVITR HCEEEEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHH LGCAVPGAVFLMAAGFPTRWGPPEHLESCRVPKIFIQSTNDQYGPRMELEEMYQGFAAPK HHCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCC EIHWIEASDHFFAGALDALEEQVFRAAEGY EEEEEECCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARRIESHHLAGPAGVLESLLEEPDHREARGVAVLCHPHPLYGGTMHNKVVYRMARGLRR CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH AGFVVLRFNFRGVGASEGEHAHLEGEIEDARAALAWLRDRYLELPYALAGFSFGSRVITR HCEEEEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHH LGCAVPGAVFLMAAGFPTRWGPPEHLESCRVPKIFIQSTNDQYGPRMELEEMYQGFAAPK HHCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCC EIHWIEASDHFFAGALDALEEQVFRAAEGY EEEEEECCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]