Click here to switch to the map view.

The map label for this gene is yajQ [C]

Identifier: 116622300

GI number: 116622300

Start: 4043561

End: 4044061

Strand: Direct

Name: yajQ [C]

Synonym: Acid_3194

Alternate gene names: 116622300

Gene position: 4043561-4044061 (Clockwise)

Preceding gene: 116622299

Following gene: 116622301

Centisome position: 40.58

GC content: 55.09

Gene sequence:

>501_bases
ATGCCTGATAACAGCTTTGACATCGTTTCCAAGATCGAAATGCCGGAAGTGCACAACGCCGTGCAACAGGCGATGAAGGA
AGTCCAGCAGCGTTTCGACCTGAAGGACTCTCACTCAAATATCGAGCTCAAAGAGAAGGACAACAAGATCCTGCTCCAGT
CGAGCGACGAGTATAAGCTTAAGAACGTCATCGACATTCTGCAATCGAAACTGGTGAAGCGCAATGTGCCGCTCAAGGGG
CTGGCGTATGGCGAGATCATTCCTTCCGCCGGGTCCACCGTGAAGCAGGAGATCACGCTGCAGCAGGGCATCGCGATCGA
GAAGGCGCGCGACATCGTCAAGAAGCTGAAGGACAGCAAGCTCAAAGTGCAGGCGTCCATTCAGGGCGACTTTGTGCGTG
TGGCCGGGAAAGATCGCGACACGCTGCAATCGGCGATCGCGCTGCTGCGCGGCAGCGATTTCGGCATTGACATGCAGTTC
ACCAACTACCGCACGAATTAG

Upstream 100 bases:

>100_bases
GGTCCGCCGCGTCAGCCCCATCCGCCTCCGCTCCGGTTCTATATTAGGATTGGATATCAGCCGTCCGGAGCCCGAACCCT
CCGACGACTCTGAATAGCTT

Downstream 100 bases:

>100_bases
CCGCGTGGCCCGCCGCATCGAGTCGCATCATTTGGCCGGCCCGGCCGGAGTGCTGGAATCCTTACTGGAAGAGCCCGATC
ATCGCGAAGCGCGCGGGGTC

Product: putative nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MPDNSFDIVSKIEMPEVHNAVQQAMKEVQQRFDLKDSHSNIELKEKDNKILLQSSDEYKLKNVIDILQSKLVKRNVPLKG
LAYGEIIPSAGSTVKQEITLQQGIAIEKARDIVKKLKDSKLKVQASIQGDFVRVAGKDRDTLQSAIALLRGSDFGIDMQF
TNYRTN

Sequences:

>Translated_166_residues
MPDNSFDIVSKIEMPEVHNAVQQAMKEVQQRFDLKDSHSNIELKEKDNKILLQSSDEYKLKNVIDILQSKLVKRNVPLKG
LAYGEIIPSAGSTVKQEITLQQGIAIEKARDIVKKLKDSKLKVQASIQGDFVRVAGKDRDTLQSAIALLRGSDFGIDMQF
TNYRTN
>Mature_165_residues
PDNSFDIVSKIEMPEVHNAVQQAMKEVQQRFDLKDSHSNIELKEKDNKILLQSSDEYKLKNVIDILQSKLVKRNVPLKGL
AYGEIIPSAGSTVKQEITLQQGIAIEKARDIVKKLKDSKLKVQASIQGDFVRVAGKDRDTLQSAIALLRGSDFGIDMQFT
NYRTN

Specific function: Unknown

COG id: COG1666

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0234 family

Homologues:

Organism=Escherichia coli, GI87081737, Length=164, Percent_Identity=43.9024390243902, Blast_Score=133, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3194_SOLUE (Q022D2)

Other databases:

- EMBL:   CP000473
- RefSeq:   YP_824456.1
- ProteinModelPortal:   Q022D2
- SMR:   Q022D2
- STRING:   Q022D2
- GeneID:   4428616
- GenomeReviews:   CP000473_GR
- KEGG:   sus:Acid_3194
- NMPDR:   fig|234267.9.peg.3031
- eggNOG:   COG1666
- HOGENOM:   HBG290634
- OMA:   LQFTNYR
- PhylomeDB:   Q022D2
- ProtClustDB:   PRK05412
- HAMAP:   MF_00632
- InterPro:   IPR007551

Pfam domain/function: PF04461 DUF520

EC number: NA

Molecular weight: Translated: 18701; Mature: 18570

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDNSFDIVSKIEMPEVHNAVQQAMKEVQQRFDLKDSHSNIELKEKDNKILLQSSDEYKL
CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCHHH
KNVIDILQSKLVKRNVPLKGLAYGEIIPSAGSTVKQEITLQQGIAIEKARDIVKKLKDSK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCC
LKVQASIQGDFVRVAGKDRDTLQSAIALLRGSDFGIDMQFTNYRTN
EEEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCC
>Mature Secondary Structure 
PDNSFDIVSKIEMPEVHNAVQQAMKEVQQRFDLKDSHSNIELKEKDNKILLQSSDEYKL
CCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCHHH
KNVIDILQSKLVKRNVPLKGLAYGEIIPSAGSTVKQEITLQQGIAIEKARDIVKKLKDSK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCC
LKVQASIQGDFVRVAGKDRDTLQSAIALLRGSDFGIDMQFTNYRTN
EEEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA