| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621968
Identifier: 116621968
GI number: 116621968
Start: 3612711
End: 3613871
Strand: Direct
Name: 116621968
Synonym: Acid_2853
Alternate gene names: NA
Gene position: 3612711-3613871 (Clockwise)
Preceding gene: 116621965
Following gene: 116621969
Centisome position: 36.25
GC content: 58.91
Gene sequence:
>1161_bases ATGAAGCGCCTATCTTCATTCACCGGAGTAATCACTGTCATGGTCGCCTGCGGCATCGCGCCGGCCTTTGGCCAGACCAC CATCGACATTGACGGTGTAACTTACAACGTGGCTACCAAATACAGCAGATCGCTTCGTGCCGGACCCAGGCAAGCCGCTG GCTTGTCCGTCGCGAGCGGCGTTGTGCCCAACGCGAACCTCTTCGGCGGTCTGCAGTTCTACACCGCCAATTACACCTCC TTCGGCAAATCAAACGCCTTCAACATCGTCGGCACCGACCCCTCCCTCGGTGCCGGCACTACCACCGTTCCCGTCGTCAT CGTGCCCATCAGGCTGACTTTTAACTCCACCGGCAAAGTCCTCGACGGCACCAACCAGGGTGCCGCTACCGTGAACTCAC CCATCTTCCTCACCGCCGATTTCACCACCGGCGGGACCGACGTCGGAGTCACCCAGTACGGCGACGCCATTCAGCGCGCG CAATTCTGGAATTTCTCTGGATTTTCGCCGGCCGGTTACCATGTGCTGCTTGGTGCTCCCACGGTTGCCCCCACCATCTC GATCACTGTAACCACGGGTAACGGAACCACCAACGGCTCCGGCACCGTCGGAGTGGTCTTGGACACCTTCCTGGACCCAT TGCTCACCGCGCTGGTCCCCTCCTTCGGTCCCAACGTCCTTCCCATCTTCCTGACCGACAATGTCTTTGAGAGCGCCGAT GGGACTTTCAACACCTGCTGCACCCTCGGCTACCACGCCTCCGAAGGTCCGCCGGTTGTCACTGCCCACACCTGGATCTA TGCCGCCTACACCCGCTCCGGCACCTTCAGCGGCAATGTAATCCAGGACGTTCAGCCCTTGAGTCACGAGGTCTCCGAAT GGGTGAACGATCCTTTTGTCGGGGCTTTTCCCGGAATTAACTTGATTCCGCCTGCGGTCTTACCCGGCCAGGGCGGAGCC TGTATTATTAACTTCGAAACGGGCGACCCGCTAGAGGCTCCTCCCGTCGTATTTACCGAGGTTACTAACGGCACAACCTA CCACCTCCAGGACGAGGTCTTTCTCTGGTGGTATACGCACGGACCCTCATTCGGTGTTAACGGCTTCTTCAGTTATACCG GTAAGTTCCTTACGTCTTCGAGCCTTTGCGGGCCAGGCTAA
Upstream 100 bases:
>100_bases ACCGAACTGCCCTCTCCCCCAGCAAATAGGTGATGTTATGACCAGCACCCAATGATAGACTGAGTGCCAATTCGTTCGAA GGAATGGCTACGGAGGCACA
Downstream 100 bases:
>100_bases CTGAATTCCCGGAGGATAACCATGATCAAGAATGTTCTCTCCATTTCCGTGTTTGCCCTCGCGGTCGCGGCGCTGCTTCC GTCTGCCGCTGCCGCCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MKRLSSFTGVITVMVACGIAPAFGQTTIDIDGVTYNVATKYSRSLRAGPRQAAGLSVASGVVPNANLFGGLQFYTANYTS FGKSNAFNIVGTDPSLGAGTTTVPVVIVPIRLTFNSTGKVLDGTNQGAATVNSPIFLTADFTTGGTDVGVTQYGDAIQRA QFWNFSGFSPAGYHVLLGAPTVAPTISITVTTGNGTTNGSGTVGVVLDTFLDPLLTALVPSFGPNVLPIFLTDNVFESAD GTFNTCCTLGYHASEGPPVVTAHTWIYAAYTRSGTFSGNVIQDVQPLSHEVSEWVNDPFVGAFPGINLIPPAVLPGQGGA CIINFETGDPLEAPPVVFTEVTNGTTYHLQDEVFLWWYTHGPSFGVNGFFSYTGKFLTSSSLCGPG
Sequences:
>Translated_386_residues MKRLSSFTGVITVMVACGIAPAFGQTTIDIDGVTYNVATKYSRSLRAGPRQAAGLSVASGVVPNANLFGGLQFYTANYTS FGKSNAFNIVGTDPSLGAGTTTVPVVIVPIRLTFNSTGKVLDGTNQGAATVNSPIFLTADFTTGGTDVGVTQYGDAIQRA QFWNFSGFSPAGYHVLLGAPTVAPTISITVTTGNGTTNGSGTVGVVLDTFLDPLLTALVPSFGPNVLPIFLTDNVFESAD GTFNTCCTLGYHASEGPPVVTAHTWIYAAYTRSGTFSGNVIQDVQPLSHEVSEWVNDPFVGAFPGINLIPPAVLPGQGGA CIINFETGDPLEAPPVVFTEVTNGTTYHLQDEVFLWWYTHGPSFGVNGFFSYTGKFLTSSSLCGPG >Mature_386_residues MKRLSSFTGVITVMVACGIAPAFGQTTIDIDGVTYNVATKYSRSLRAGPRQAAGLSVASGVVPNANLFGGLQFYTANYTS FGKSNAFNIVGTDPSLGAGTTTVPVVIVPIRLTFNSTGKVLDGTNQGAATVNSPIFLTADFTTGGTDVGVTQYGDAIQRA QFWNFSGFSPAGYHVLLGAPTVAPTISITVTTGNGTTNGSGTVGVVLDTFLDPLLTALVPSFGPNVLPIFLTDNVFESAD GTFNTCCTLGYHASEGPPVVTAHTWIYAAYTRSGTFSGNVIQDVQPLSHEVSEWVNDPFVGAFPGINLIPPAVLPGQGGA CIINFETGDPLEAPPVVFTEVTNGTTYHLQDEVFLWWYTHGPSFGVNGFFSYTGKFLTSSSLCGPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40279; Mature: 40279
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLSSFTGVITVMVACGIAPAFGQTTIDIDGVTYNVATKYSRSLRAGPRQAAGLSVASG CCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEHHHHHHHHCCCCCHHCCCCHHCC VVPNANLFGGLQFYTANYTSFGKSNAFNIVGTDPSLGAGTTTVPVVIVPIRLTFNSTGKV CCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCE LDGTNQGAATVNSPIFLTADFTTGGTDVGVTQYGDAIQRAQFWNFSGFSPAGYHVLLGAP EECCCCCCEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECC TVAPTISITVTTGNGTTNGSGTVGVVLDTFLDPLLTALVPSFGPNVLPIFLTDNVFESAD CCCCEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCC GTFNTCCTLGYHASEGPPVVTAHTWIYAAYTRSGTFSGNVIQDVQPLSHEVSEWVNDPFV CCEEEEEEECEECCCCCCEEEEEEEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHCCCCE GAFPGINLIPPAVLPGQGGACIINFETGDPLEAPPVVFTEVTNGTTYHLQDEVFLWWYTH ECCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCEEEEEEEC GPSFGVNGFFSYTGKFLTSSSLCGPG CCCCCCCEEEECCCHHEECCCCCCCC >Mature Secondary Structure MKRLSSFTGVITVMVACGIAPAFGQTTIDIDGVTYNVATKYSRSLRAGPRQAAGLSVASG CCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEHHHHHHHHCCCCCHHCCCCHHCC VVPNANLFGGLQFYTANYTSFGKSNAFNIVGTDPSLGAGTTTVPVVIVPIRLTFNSTGKV CCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCE LDGTNQGAATVNSPIFLTADFTTGGTDVGVTQYGDAIQRAQFWNFSGFSPAGYHVLLGAP EECCCCCCEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECC TVAPTISITVTTGNGTTNGSGTVGVVLDTFLDPLLTALVPSFGPNVLPIFLTDNVFESAD CCCCEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCC GTFNTCCTLGYHASEGPPVVTAHTWIYAAYTRSGTFSGNVIQDVQPLSHEVSEWVNDPFV CCEEEEEEECEECCCCCCEEEEEEEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHCCCCE GAFPGINLIPPAVLPGQGGACIINFETGDPLEAPPVVFTEVTNGTTYHLQDEVFLWWYTH ECCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCEEEEEEEC GPSFGVNGFFSYTGKFLTSSSLCGPG CCCCCCCEEEECCCHHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA