| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is yvgK [H]
Identifier: 116621956
GI number: 116621956
Start: 3599855
End: 3600985
Strand: Direct
Name: yvgK [H]
Synonym: Acid_2841
Alternate gene names: 116621956
Gene position: 3599855-3600985 (Clockwise)
Preceding gene: 116621955
Following gene: 116621957
Centisome position: 36.12
GC content: 65.78
Gene sequence:
>1131_bases ATGGCAAAGGCCGCCCGCGTACAGAACCGGCTAGCGGAAATTCGAAAAAGCAGGGGCGTGGGCGCAGCCGATTTGGCCAA GCGCGTCGGCGTCAGTCGCCAAACCGTCTACGCCATCGAGGCCGGCACCTACATACCCAACACCCAGGTAGCCCTGCACC TCGCGCGCGAGCTGCAGGTAGCCGTCGAAGAACTTTTCTCTCTCACCGGGGAACCGTCCGATGGCGGCGAGCGGCTGGCC TCCGACCTGCTCAGCGCCTCCACGCCGCTTCCAGGCCAGCCCGTCCGCATCTGCCAGGTCGGCTCACGGCGCGTCAGCAT TCCCGTGAGCGCCTCGCCCTACTACCTGCCGGAGGCCGATGGCGTAATCGAGCGCGCGGGACGCGCGAATAGCCGCGCCG ATCTCTCCGTCTTTGCGAACGACGAGCCCGGTCCCCACAAGCGTCTCGTCCTTGCCGGTTGCGATCCGGCCACCGGCCTG CTCGCGCGCATGGTGGAGAACATCAGCGGCGTGGAAGTGGTCTCGGCCGCCGCCTCCAGTAAACTTGCGCTCCAGTGGCT CCGCGAAGGCAAGGTCCACATCGCCGGCTCCCACCTGGAAGACGCCCGTACCGGCGAGTTCAACCTGCCCTTCATTCGCA AGCAATTTCCCGATGGTGATTTCCGTGTAGTGACCTTTGCCCGATGGGAAGAGGGCCTGGTGCTTGCGCCCGCCAATCCC AAGGAGATACGGGACGTCGAAGATCTCGCCCGCAAAACCGTTCGCTTCGTGAATCGCGAGGCTGGTTCCGGCAGCCGTGC GCTCCTGGACAAGCGCCTCGCCGCCGCCGGCATTGAGACTCATCAGATTCACGGTTATGACCGCGTCGCCTATGGCCACC TCGCCGCCGCCTACTGCGTGGTCTCCGGCGAAGCCGACGTATGCCTCGCGACGCGCTCCGCCGCCCGAACCTTCGGCCTT GGCTTTATCCCTCTGCACAGCGAGCGCTACGACCTGGTGATGCGCAAAGATAGCGCCGCGCTCCCCGCCGTCCAGTCCTT CCTCGACGTCCTGCAGCGTGCAGCCCTCCGCCGCAAACTCGAAGTGCTCGCCGGCTATGACACCACCGAGACCGGCGTCC TGGTCGCATAA
Upstream 100 bases:
>100_bases TTCGAATTCGTCGGCAAGCTGCACTTCTAGTGCTTGCTGACGCGCCGAGCCGCGACCGTCAGGGAGCGTCGTTGGCTACA ATTTCATCCAGGAGATCCCG
Downstream 100 bases:
>100_bases CGGTCTTCAAGGGGGTTACGCCCATCGCGAACCGCGACCTCAGGGAGCGATCTAAGCGTGTCATCCTATAGATATGGCAC TCAATAAATCTCTTGGAATC
Product: molybdate metabolism transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MAKAARVQNRLAEIRKSRGVGAADLAKRVGVSRQTVYAIEAGTYIPNTQVALHLARELQVAVEELFSLTGEPSDGGERLA SDLLSASTPLPGQPVRICQVGSRRVSIPVSASPYYLPEADGVIERAGRANSRADLSVFANDEPGPHKRLVLAGCDPATGL LARMVENISGVEVVSAAASSKLALQWLREGKVHIAGSHLEDARTGEFNLPFIRKQFPDGDFRVVTFARWEEGLVLAPANP KEIRDVEDLARKTVRFVNREAGSGSRALLDKRLAAAGIETHQIHGYDRVAYGHLAAAYCVVSGEADVCLATRSAARTFGL GFIPLHSERYDLVMRKDSAALPAVQSFLDVLQRAALRRKLEVLAGYDTTETGVLVA
Sequences:
>Translated_376_residues MAKAARVQNRLAEIRKSRGVGAADLAKRVGVSRQTVYAIEAGTYIPNTQVALHLARELQVAVEELFSLTGEPSDGGERLA SDLLSASTPLPGQPVRICQVGSRRVSIPVSASPYYLPEADGVIERAGRANSRADLSVFANDEPGPHKRLVLAGCDPATGL LARMVENISGVEVVSAAASSKLALQWLREGKVHIAGSHLEDARTGEFNLPFIRKQFPDGDFRVVTFARWEEGLVLAPANP KEIRDVEDLARKTVRFVNREAGSGSRALLDKRLAAAGIETHQIHGYDRVAYGHLAAAYCVVSGEADVCLATRSAARTFGL GFIPLHSERYDLVMRKDSAALPAVQSFLDVLQRAALRRKLEVLAGYDTTETGVLVA >Mature_375_residues AKAARVQNRLAEIRKSRGVGAADLAKRVGVSRQTVYAIEAGTYIPNTQVALHLARELQVAVEELFSLTGEPSDGGERLAS DLLSASTPLPGQPVRICQVGSRRVSIPVSASPYYLPEADGVIERAGRANSRADLSVFANDEPGPHKRLVLAGCDPATGLL ARMVENISGVEVVSAAASSKLALQWLREGKVHIAGSHLEDARTGEFNLPFIRKQFPDGDFRVVTFARWEEGLVLAPANPK EIRDVEDLARKTVRFVNREAGSGSRALLDKRLAAAGIETHQIHGYDRVAYGHLAAAYCVVSGEADVCLATRSAARTFGLG FIPLHSERYDLVMRKDSAALPAVQSFLDVLQRAALRRKLEVLAGYDTTETGVLVA
Specific function: Unknown
COG id: COG1910
COG function: function code P; Periplasmic molybdate-binding protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR010093 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40513; Mature: 40381
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAARVQNRLAEIRKSRGVGAADLAKRVGVSRQTVYAIEAGTYIPNTQVALHLARELQV CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH AVEELFSLTGEPSDGGERLASDLLSASTPLPGQPVRICQVGSRRVSIPVSASPYYLPEAD HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCC GVIERAGRANSRADLSVFANDEPGPHKRLVLAGCDPATGLLARMVENISGVEVVSAAASS HHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHH KLALQWLREGKVHIAGSHLEDARTGEFNLPFIRKQFPDGDFRVVTFARWEEGLVLAPANP HHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCEEECCCCC KEIRDVEDLARKTVRFVNREAGSGSRALLDKRLAAAGIETHQIHGYDRVAYGHLAAAYCV HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHEEEE VSGEADVCLATRSAARTFGLGFIPLHSERYDLVMRKDSAALPAVQSFLDVLQRAALRRKL ECCCCCEEEEEHHHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH EVLAGYDTTETGVLVA HHHHCCCCCCCCEEEC >Mature Secondary Structure AKAARVQNRLAEIRKSRGVGAADLAKRVGVSRQTVYAIEAGTYIPNTQVALHLARELQV CCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH AVEELFSLTGEPSDGGERLASDLLSASTPLPGQPVRICQVGSRRVSIPVSASPYYLPEAD HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCC GVIERAGRANSRADLSVFANDEPGPHKRLVLAGCDPATGLLARMVENISGVEVVSAAASS HHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHH KLALQWLREGKVHIAGSHLEDARTGEFNLPFIRKQFPDGDFRVVTFARWEEGLVLAPANP HHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCEEECCCCC KEIRDVEDLARKTVRFVNREAGSGSRALLDKRLAAAGIETHQIHGYDRVAYGHLAAAYCV HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHEEEE VSGEADVCLATRSAARTFGLGFIPLHSERYDLVMRKDSAALPAVQSFLDVLQRAALRRKL ECCCCCEEEEEHHHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH EVLAGYDTTETGVLVA HHHHCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]