| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621950
Identifier: 116621950
GI number: 116621950
Start: 3589159
End: 3590043
Strand: Direct
Name: 116621950
Synonym: Acid_2835
Alternate gene names: NA
Gene position: 3589159-3590043 (Clockwise)
Preceding gene: 116621949
Following gene: 116621951
Centisome position: 36.02
GC content: 58.53
Gene sequence:
>885_bases GTGAGTCCTCAACCGATCTATCAGCAGCCGTCCCCGCAGCGCTCGGGCCTGCTCGCCGCACTCGTCGCCGGGTCCATCAT CGCGCTGGTAGCCACCAACATTTATTTGTACGTGCAGTTGGATCACGTGCGTACCGACGTCGCCAAAGTCCGCGAGTCCC TGTCCACCGAGTTGAGCAATCTCAAGGATGCTTCTTCGGTAACCACCGCGTCGCAATCGCGCCACCTGGAAACGTTGAAA CAGGAATTGGACGCTGCTCGCGTTAAGAACCGCGACGAAGCGCGCACCATGTCCAGCCAGGCCAAGGCCGAAGCGCAGGC GCATGCCGATCAGTTGGCGCGCCAGATCCAGGCCGAAGAGGCCAAAGTCCAGCAGCAGGTCTCGAGCGAGATCAGCGAAG TCAAGACCGCGGCAAACACCGCCAATGCCAAAATCGCCGATGTTTCCACCGATGTCGGCGGGGTGAAAACCCAGGTTTCG GCGACCCAGGCCGAATTACAGAAGACAATCTCCGCCCTCAAGAGTACCCAGGGCGATCTCGGCGTGCAGTCTGGCTTGAT CGCGACCAACGCCCAGGAACTCCAGGCCCTCAAACGCCTTGGCGAGCGCAACTACTTCGAATTCAAAATCGGCAAGAGCA AGGAACGCCAGCGCGTCGGCGATATCACCGTCATGCTCAAGAAGACCGACCCGAAGAAGAACAAGTACACCATCGAAGTC ATGGCCGACGACAAGCTGACGGAGAAGAAGGACAAGAACGTCAACGAACCCGTCCAGTTCTATACCAGCAAAGCCCGCCA GCCCTACGAAATGGTCGTCAACCAGGTCCAAAAAGACCTGATCGTCGGCTACTTGGCCACCCCCAAAGAACAGTCCGGCA GATAA
Upstream 100 bases:
>100_bases TATGCCCAACCCCCGGCCAGAGCTTTGAAGTGAGTTAAGTGAAACCGAAAACACCCGAATCTCCATCTATACTGTAAGGA AACCAAAGGAGTACCGTTAC
Downstream 100 bases:
>100_bases TAACGATCGCTCCCTGACGGTCGCGGCTCTGCTTGCGACCGTTTGTTTCACGTGATCTATCTCATTACGTTTGCCTGCTA TGGGCAGCATTTCCATGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSPQPIYQQPSPQRSGLLAALVAGSIIALVATNIYLYVQLDHVRTDVAKVRESLSTELSNLKDASSVTTASQSRHLETLK QELDAARVKNRDEARTMSSQAKAEAQAHADQLARQIQAEEAKVQQQVSSEISEVKTAANTANAKIADVSTDVGGVKTQVS ATQAELQKTISALKSTQGDLGVQSGLIATNAQELQALKRLGERNYFEFKIGKSKERQRVGDITVMLKKTDPKKNKYTIEV MADDKLTEKKDKNVNEPVQFYTSKARQPYEMVVNQVQKDLIVGYLATPKEQSGR
Sequences:
>Translated_294_residues MSPQPIYQQPSPQRSGLLAALVAGSIIALVATNIYLYVQLDHVRTDVAKVRESLSTELSNLKDASSVTTASQSRHLETLK QELDAARVKNRDEARTMSSQAKAEAQAHADQLARQIQAEEAKVQQQVSSEISEVKTAANTANAKIADVSTDVGGVKTQVS ATQAELQKTISALKSTQGDLGVQSGLIATNAQELQALKRLGERNYFEFKIGKSKERQRVGDITVMLKKTDPKKNKYTIEV MADDKLTEKKDKNVNEPVQFYTSKARQPYEMVVNQVQKDLIVGYLATPKEQSGR >Mature_293_residues SPQPIYQQPSPQRSGLLAALVAGSIIALVATNIYLYVQLDHVRTDVAKVRESLSTELSNLKDASSVTTASQSRHLETLKQ ELDAARVKNRDEARTMSSQAKAEAQAHADQLARQIQAEEAKVQQQVSSEISEVKTAANTANAKIADVSTDVGGVKTQVSA TQAELQKTISALKSTQGDLGVQSGLIATNAQELQALKRLGERNYFEFKIGKSKERQRVGDITVMLKKTDPKKNKYTIEVM ADDKLTEKKDKNVNEPVQFYTSKARQPYEMVVNQVQKDLIVGYLATPKEQSGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32317; Mature: 32186
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQPIYQQPSPQRSGLLAALVAGSIIALVATNIYLYVQLDHVRTDVAKVRESLSTELSN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHH LKDASSVTTASQSRHLETLKQELDAARVKNRDEARTMSSQAKAEAQAHADQLARQIQAEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKVQQQVSSEISEVKTAANTANAKIADVSTDVGGVKTQVSATQAELQKTISALKSTQGDL HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GVQSGLIATNAQELQALKRLGERNYFEFKIGKSKERQRVGDITVMLKKTDPKKNKYTIEV CHHCCCHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCEEEEEECCCCCCCCEEEEE MADDKLTEKKDKNVNEPVQFYTSKARQPYEMVVNQVQKDLIVGYLATPKEQSGR EECCCHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SPQPIYQQPSPQRSGLLAALVAGSIIALVATNIYLYVQLDHVRTDVAKVRESLSTELSN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHH LKDASSVTTASQSRHLETLKQELDAARVKNRDEARTMSSQAKAEAQAHADQLARQIQAEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKVQQQVSSEISEVKTAANTANAKIADVSTDVGGVKTQVSATQAELQKTISALKSTQGDL HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GVQSGLIATNAQELQALKRLGERNYFEFKIGKSKERQRVGDITVMLKKTDPKKNKYTIEV CHHCCCHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCEEEEEECCCCCCCCEEEEE MADDKLTEKKDKNVNEPVQFYTSKARQPYEMVVNQVQKDLIVGYLATPKEQSGR EECCCHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA