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The map label for this gene is ogl [H]

Identifier: 116621879

GI number: 116621879

Start: 3498063

End: 3499388

Strand: Direct

Name: ogl [H]

Synonym: Acid_2762

Alternate gene names: 116621879

Gene position: 3498063-3499388 (Clockwise)

Preceding gene: 116621878

Following gene: 116621883

Centisome position: 35.1

GC content: 63.88

Gene sequence:

>1326_bases
ATGCGCAACCTCACACTTCTGGCGCTCGCCGCGATTCGCATTCTAACCGCGCAGTCCGCGCTTCCCACCGAGTGGATCGA
TACCGCCACCGGCCATCGCGTGATCCGCCTCTCCCGCGACGACGGCACACAGAGCCTCTACTTTAACCAGAATGCCTACA
CGGCTGATGGGAAGAAGCTGATCGTCACCACAGCGGGCGGCGGCATCGCGACCATTGTCCTGGCAACTCGCGAAGTCAAA
CCGCTGGTCGCCGGCCCGGTGTCGGTGCTGGTGGCCGGCCGCCGGACCGGCGACGTCTACTACACCAAACGCGATACCGG
CGGCGCCATAGTCTACGCGGCGAATGTCGATACCGGCGCCACGCGCCAAGTGGTGAAGTTGCCTCCCGGCCGCAACGTCG
CGTCGTTGAACGCCGATGAGACGTTGTTACTCGGCACGTACGTGGAAGGCGCCGGCATAACTCCGCCCGCCGGAGCGCCA
GCCAGAAATCCCGCCGATGCCGCGCGCTTCGGCCAGGCCAACTACGAAGCCGTCGGCGCCGATGGCAAGCCGATGACCTT
CGCCGATGCCAAGGATCTGCGCCTCCACAACCAGTTAATGGCTACCCGCGCCGGCGCCCCGCGCGTGCTCTTCACCGTCA
ACACCGGGACCGGCGAACTGAAGGATATCTTCCGCGAGCACGAATGGCTCGGTCATCTGCAATTCTCGCCCACCGACCCC
AGCCTCATCATGTTCTGCCACGAAGGCACCTGGCACGAGGTCGATCGCATCTGGACCATCCACGCCGATGGCGCCGGCCT
CAAGAAAATCCACACCCGCACCATGAACATGGAAATCGCCGGCCACGAATTCTTCTCGTCCGACGGCGCCGCCATCTGGT
ACGATTTGCAAACTCCGCGCGGCCTCGATTTCTGGCTGGCCGGCTATCAGGTCGCCACCGGCAAGCGCACCTGGTACCAT
CTCGATCGCAATGAGTGGTCGGTGCACTTCAACGTCTCCCCCGATGGCAAACTCTTCGCCGGCGACGGCGGCGATAGCGA
AATGGTGGCGCGCGCGCCCGATGGCAAGTGGATCTATCTTTTCCGTCCGCAGCGCGTCTCCGATGTCGCCGGTGTCAAGG
CCGCGAACTCCGACGCCCTGATCGATACCGGCTTCTTCCAGTCGGAGCGCCTGGTCAACATGAGCAAACACGACTACCGC
CTCGAGCCCAACGTGACCTTCTCCCCCGACATGAAGTGGGTGGTCTTCCGCTCCAACATGCTGGGCCCCATCCACGTCTA
CGCCGTCGAGATCGCCAAGGCTTCCCCCAACGAGCCGCGACCGTAA

Upstream 100 bases:

>100_bases
CCGCCAAACTCGGAGAGTTGGTGCGCGCCGAAAACGGCACCGCCAAAGCCGCGGACGCCATCGAGCGGGCGCTACAATAA
CGTTGATTTAGGAGGGCACG

Downstream 100 bases:

>100_bases
CGGGTTTGCAGCCTTGTATTACACTGCTTTTGTTTGCTCGCGGCCCGCAAACATCCGCACCGACTTGTGGGGCAGGCAAT
CCTGCCTGCAGCCGCCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MRNLTLLALAAIRILTAQSALPTEWIDTATGHRVIRLSRDDGTQSLYFNQNAYTADGKKLIVTTAGGGIATIVLATREVK
PLVAGPVSVLVAGRRTGDVYYTKRDTGGAIVYAANVDTGATRQVVKLPPGRNVASLNADETLLLGTYVEGAGITPPAGAP
ARNPADAARFGQANYEAVGADGKPMTFADAKDLRLHNQLMATRAGAPRVLFTVNTGTGELKDIFREHEWLGHLQFSPTDP
SLIMFCHEGTWHEVDRIWTIHADGAGLKKIHTRTMNMEIAGHEFFSSDGAAIWYDLQTPRGLDFWLAGYQVATGKRTWYH
LDRNEWSVHFNVSPDGKLFAGDGGDSEMVARAPDGKWIYLFRPQRVSDVAGVKAANSDALIDTGFFQSERLVNMSKHDYR
LEPNVTFSPDMKWVVFRSNMLGPIHVYAVEIAKASPNEPRP

Sequences:

>Translated_441_residues
MRNLTLLALAAIRILTAQSALPTEWIDTATGHRVIRLSRDDGTQSLYFNQNAYTADGKKLIVTTAGGGIATIVLATREVK
PLVAGPVSVLVAGRRTGDVYYTKRDTGGAIVYAANVDTGATRQVVKLPPGRNVASLNADETLLLGTYVEGAGITPPAGAP
ARNPADAARFGQANYEAVGADGKPMTFADAKDLRLHNQLMATRAGAPRVLFTVNTGTGELKDIFREHEWLGHLQFSPTDP
SLIMFCHEGTWHEVDRIWTIHADGAGLKKIHTRTMNMEIAGHEFFSSDGAAIWYDLQTPRGLDFWLAGYQVATGKRTWYH
LDRNEWSVHFNVSPDGKLFAGDGGDSEMVARAPDGKWIYLFRPQRVSDVAGVKAANSDALIDTGFFQSERLVNMSKHDYR
LEPNVTFSPDMKWVVFRSNMLGPIHVYAVEIAKASPNEPRP
>Mature_441_residues
MRNLTLLALAAIRILTAQSALPTEWIDTATGHRVIRLSRDDGTQSLYFNQNAYTADGKKLIVTTAGGGIATIVLATREVK
PLVAGPVSVLVAGRRTGDVYYTKRDTGGAIVYAANVDTGATRQVVKLPPGRNVASLNADETLLLGTYVEGAGITPPAGAP
ARNPADAARFGQANYEAVGADGKPMTFADAKDLRLHNQLMATRAGAPRVLFTVNTGTGELKDIFREHEWLGHLQFSPTDP
SLIMFCHEGTWHEVDRIWTIHADGAGLKKIHTRTMNMEIAGHEFFSSDGAAIWYDLQTPRGLDFWLAGYQVATGKRTWYH
LDRNEWSVHFNVSPDGKLFAGDGGDSEMVARAPDGKWIYLFRPQRVSDVAGVKAANSDALIDTGFFQSERLVNMSKHDYR
LEPNVTFSPDMKWVVFRSNMLGPIHVYAVEIAKASPNEPRP

Specific function: Involved in degradation of pectin, which causes soft-rod disease in plants [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40 [H]

EC number: =4.2.2.6 [H]

Molecular weight: Translated: 48277; Mature: 48277

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLTLLALAAIRILTAQSALPTEWIDTATGHRVIRLSRDDGTQSLYFNQNAYTADGKKL
CCCEEHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECCCCCEEEEECCCEEECCCCEE
IVTTAGGGIATIVLATREVKPLVAGPVSVLVAGRRTGDVYYTKRDTGGAIVYAANVDTGA
EEEECCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCC
TRQVVKLPPGRNVASLNADETLLLGTYVEGAGITPPAGAPARNPADAARFGQANYEAVGA
CEEEEECCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEECC
DGKPMTFADAKDLRLHNQLMATRAGAPRVLFTVNTGTGELKDIFREHEWLGHLQFSPTDP
CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHEEEEEECCCCC
SLIMFCHEGTWHEVDRIWTIHADGAGLKKIHTRTMNMEIAGHEFFSSDGAAIWYDLQTPR
CEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEECCEEECCCCCEEEEECCCCC
GLDFWLAGYQVATGKRTWYHLDRNEWSVHFNVSPDGKLFAGDGGDSEMVARAPDGKWIYL
CCEEEEECEEEECCCEEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEECCCCCEEEE
FRPQRVSDVAGVKAANSDALIDTGFFQSERLVNMSKHDYRLEPNVTFSPDMKWVVFRSNM
ECCCCCCHHCCCEECCCCCEEECCCCCCCCEECCCCCCEEECCCCEECCCCEEEEEECCC
LGPIHVYAVEIAKASPNEPRP
CCEEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MRNLTLLALAAIRILTAQSALPTEWIDTATGHRVIRLSRDDGTQSLYFNQNAYTADGKKL
CCCEEHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEECCCCCEEEEECCCEEECCCCEE
IVTTAGGGIATIVLATREVKPLVAGPVSVLVAGRRTGDVYYTKRDTGGAIVYAANVDTGA
EEEECCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCC
TRQVVKLPPGRNVASLNADETLLLGTYVEGAGITPPAGAPARNPADAARFGQANYEAVGA
CEEEEECCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEECC
DGKPMTFADAKDLRLHNQLMATRAGAPRVLFTVNTGTGELKDIFREHEWLGHLQFSPTDP
CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHEEEEEECCCCC
SLIMFCHEGTWHEVDRIWTIHADGAGLKKIHTRTMNMEIAGHEFFSSDGAAIWYDLQTPR
CEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEECCEEECCCCCEEEEECCCCC
GLDFWLAGYQVATGKRTWYHLDRNEWSVHFNVSPDGKLFAGDGGDSEMVARAPDGKWIYL
CCEEEEECEEEECCCEEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEECCCCCEEEE
FRPQRVSDVAGVKAANSDALIDTGFFQSERLVNMSKHDYRLEPNVTFSPDMKWVVFRSNM
ECCCCCCHHCCCEECCCCCEEECCCCCCCCEECCCCCCEEECCCCEECCCCEEEEEECCC
LGPIHVYAVEIAKASPNEPRP
CCEEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2695393 [H]