| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is fabG [H]
Identifier: 116621818
GI number: 116621818
Start: 3423412
End: 3424146
Strand: Reverse
Name: fabG [H]
Synonym: Acid_2700
Alternate gene names: 116621818
Gene position: 3424146-3423412 (Counterclockwise)
Preceding gene: 116621819
Following gene: 116621816
Centisome position: 34.36
GC content: 63.54
Gene sequence:
>735_bases ATGAAGCCAACCGCGATTGTGACGGGCGCGAGCCGTGGAATCGGCCGCGCCATCGCAACGGAGCTTGCGAAGACCCATCA AGTGATTGCGACATACCGCGGACGGCAGGACGCCGCGGAAAGCTTGCGCGCCGAGACCGGCAGCGACATCTTCCAATGCG ACATCGGCAGCCGTTCCGATCGCGAAGCCCTCATGGCGTTTGCGCGCGAGCGCTTTCACAAGCTCGACGTGCTGGTCAAC AACGCGGGCATGGCTCCGCGCGAACGGCGCGATTTGCTGGACGCCACCGAAGAAAGCTTCGACGAGCTGATTGCGACCAA CCTCAAGGGACCGCACTTCCTCACCCAGCAGGCGGCGCGGTGGATGAGCGAACACCAGGACGGGCGCATCGTGTTCGTGA CCTCGATTTCTTCCTACACGGCGAGCGTGAATCGCGGCGAGTATTGCGTTTCCAAGGCAGCGCTGAGTATGACGGTCGCG CTGTATGCGCAGCGCCTCGCGGAGCTCGGGATCAAGGTCTTCGAAATTCGTCCGGGCATTATCCGCACCGACATGATCGC CAAGGTCGAGCAGGTGTACGAGGAGAAGATCGCCGCGGGCCTGCTGCCGCAGCGCCGCATGGGCGAGGGCTGCGACGTCG CCAAGGCCGTCCGCGTGATCGCCGACGGCATGCTCGATTACTCCACGGGCCAGGTGTTGAACGTGGACGGCGGGTTTAGT CTGCGGAGTTTGTAG
Upstream 100 bases:
>100_bases CGCGGGCGCCGGTGCGGAAGTGGTCACCGCCGGGCAGCGGGTACGCATCCCTTCGGAGACCCGGCTGACCTTCGTTCTGG ATAGCGCGGTCCGGTTCTAG
Downstream 100 bases:
>100_bases GCCCGTCCTACCGGATCACGAACAAGTCGGTGTCCTGCTGCTGGTCACGGCCTTCTTCCACCTTGATGATTTTGGGAGTC ATCATATCGATATCGGCGGT
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MKPTAIVTGASRGIGRAIATELAKTHQVIATYRGRQDAAESLRAETGSDIFQCDIGSRSDREALMAFARERFHKLDVLVN NAGMAPRERRDLLDATEESFDELIATNLKGPHFLTQQAARWMSEHQDGRIVFVTSISSYTASVNRGEYCVSKAALSMTVA LYAQRLAELGIKVFEIRPGIIRTDMIAKVEQVYEEKIAAGLLPQRRMGEGCDVAKAVRVIADGMLDYSTGQVLNVDGGFS LRSL
Sequences:
>Translated_244_residues MKPTAIVTGASRGIGRAIATELAKTHQVIATYRGRQDAAESLRAETGSDIFQCDIGSRSDREALMAFARERFHKLDVLVN NAGMAPRERRDLLDATEESFDELIATNLKGPHFLTQQAARWMSEHQDGRIVFVTSISSYTASVNRGEYCVSKAALSMTVA LYAQRLAELGIKVFEIRPGIIRTDMIAKVEQVYEEKIAAGLLPQRRMGEGCDVAKAVRVIADGMLDYSTGQVLNVDGGFS LRSL >Mature_244_residues MKPTAIVTGASRGIGRAIATELAKTHQVIATYRGRQDAAESLRAETGSDIFQCDIGSRSDREALMAFARERFHKLDVLVN NAGMAPRERRDLLDATEESFDELIATNLKGPHFLTQQAARWMSEHQDGRIVFVTSISSYTASVNRGEYCVSKAALSMTVA LYAQRLAELGIKVFEIRPGIIRTDMIAKVEQVYEEKIAAGLLPQRRMGEGCDVAKAVRVIADGMLDYSTGQVLNVDGGFS LRSL
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=31.4285714285714, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI33667109, Length=187, Percent_Identity=35.8288770053476, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=31.1475409836066, Blast_Score=92, Evalue=3e-19, Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=31.7269076305221, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI126723191, Length=174, Percent_Identity=32.7586206896552, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI7705925, Length=237, Percent_Identity=29.535864978903, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI4758504, Length=250, Percent_Identity=24.4, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI19923817, Length=258, Percent_Identity=27.1317829457364, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI209862901, Length=214, Percent_Identity=30.3738317757009, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI19923983, Length=214, Percent_Identity=30.3738317757009, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI59889578, Length=200, Percent_Identity=27.5, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1787335, Length=242, Percent_Identity=31.8181818181818, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI87082160, Length=244, Percent_Identity=29.9180327868852, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1788459, Length=248, Percent_Identity=29.4354838709677, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787905, Length=239, Percent_Identity=33.0543933054393, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789208, Length=247, Percent_Identity=27.5303643724696, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI2367365, Length=239, Percent_Identity=30.5439330543933, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=29.2490118577075, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=29.5081967213115, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1790717, Length=241, Percent_Identity=27.3858921161826, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1787820, Length=232, Percent_Identity=27.1551724137931, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1786701, Length=200, Percent_Identity=29, Blast_Score=60, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=32.258064516129, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI115534694, Length=241, Percent_Identity=33.6099585062241, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17555706, Length=242, Percent_Identity=28.9256198347107, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI71994604, Length=252, Percent_Identity=29.7619047619048, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17508651, Length=253, Percent_Identity=26.8774703557312, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=28.4584980237154, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI25147288, Length=243, Percent_Identity=29.2181069958848, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=29.7619047619048, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17538480, Length=259, Percent_Identity=30.5019305019305, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=30, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17562906, Length=259, Percent_Identity=30.1158301158301, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=28.3524904214559, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17560332, Length=258, Percent_Identity=29.0697674418605, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17562908, Length=258, Percent_Identity=29.4573643410853, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=26.8199233716475, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17531453, Length=257, Percent_Identity=32.6848249027237, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193204405, Length=260, Percent_Identity=28.8461538461538, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=27.3076923076923, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=25.2577319587629, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI72000259, Length=258, Percent_Identity=26.3565891472868, Blast_Score=64, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17538182, Length=250, Percent_Identity=24, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI21355319, Length=244, Percent_Identity=30.327868852459, Blast_Score=98, Evalue=5e-21, Organism=Drosophila melanogaster, GI23397609, Length=245, Percent_Identity=33.0612244897959, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI24639444, Length=244, Percent_Identity=30.7377049180328, Blast_Score=94, Evalue=9e-20, Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=32.6612903225806, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=32.2709163346614, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24641232, Length=222, Percent_Identity=30.6306306306306, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI17737361, Length=249, Percent_Identity=26.5060240963855, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24644339, Length=247, Percent_Identity=29.5546558704453, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI116007236, Length=199, Percent_Identity=29.1457286432161, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI116007238, Length=183, Percent_Identity=28.4153005464481, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24648944, Length=225, Percent_Identity=30.2222222222222, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26786; Mature: 26786
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTAIVTGASRGIGRAIATELAKTHQVIATYRGRQDAAESLRAETGSDIFQCDIGSRSD CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCC REALMAFARERFHKLDVLVNNAGMAPRERRDLLDATEESFDELIATNLKGPHFLTQQAAR HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH WMSEHQDGRIVFVTSISSYTASVNRGEYCVSKAALSMTVALYAQRLAELGIKVFEIRPGI HHHHCCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC IRTDMIAKVEQVYEEKIAAGLLPQRRMGEGCDVAKAVRVIADGMLDYSTGQVLNVDGGFS HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCC LRSL CCCC >Mature Secondary Structure MKPTAIVTGASRGIGRAIATELAKTHQVIATYRGRQDAAESLRAETGSDIFQCDIGSRSD CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCC REALMAFARERFHKLDVLVNNAGMAPRERRDLLDATEESFDELIATNLKGPHFLTQQAAR HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH WMSEHQDGRIVFVTSISSYTASVNRGEYCVSKAALSMTVALYAQRLAELGIKVFEIRPGI HHHHCCCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC IRTDMIAKVEQVYEEKIAAGLLPQRRMGEGCDVAKAVRVIADGMLDYSTGQVLNVDGGFS HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCC LRSL CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]