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The map label for this gene is xylI [H]

Identifier: 116621799

GI number: 116621799

Start: 3396464

End: 3397561

Strand: Direct

Name: xylI [H]

Synonym: Acid_2681

Alternate gene names: 116621799

Gene position: 3396464-3397561 (Clockwise)

Preceding gene: 116621798

Following gene: 116621802

Centisome position: 34.08

GC content: 61.48

Gene sequence:

>1098_bases
ATGAAGTTCATCGTGTTCTCCATTCTCCTCGCCGCGTTGCCGGCGAACGCACAGCCCACCCTGAAGGACGCCTTCCAGGG
AATCTTTCGCATCGGCGCTGCCGTCAACCAGTCGCAGTTCAGCGAGCAGGATCCCCGCGCGCTTCCCATCATCAAAGCTC
AATTCAACACCATCAGTCCCGAGAACGTTCTCAAATGGGAATCCGTGCACCCGCGGCCGGATGGATACGCCTTCGACGCG
CCCGATCGCTATGTGGCCTTCGGCGAAAAGAACGGCATGTTCATCATCGGCCACACCCTCGTGTGGCACAGCCAGACGCC
GCGCTGGGTCTTTCAGGATGACAAGGGCGCGCCCCTCGATCGCGAGGCCCTGCTGAAGCGCATGCGCGAGCACATCCTCA
CCGTGGTCGGCCGCTATAAAGGCCGGGTCGGCGGCTGGGATGTGGTTAACGAAGCCCTCAACGAAGACGGCACCCTGCGC
AAATCTCCGTGGATGACGATCATCGGCGAGGACTATCTCGTCAAGGCCTTCGAGTACGCCCATGAAGCCGATCCGAAGGC
GGAACTCTACTACAACGATTACTCGGTGGAGCGCCACGCCAAGCGCGAGGGCGCCGTGGTGCTCATCAAGAAGCTCCAGG
CGGCGGGAATCAAGGTCGCCGCCATCGGCCTGCAGGGTCACGACAAGATGGATTGGCCCTCGCTCGAAGATCAGGACGCC
ACCATCGCCGCGTTTGAAAAACTCGGGATCAAAGTGAACATCACCGAGTTCGATATCGACGTGCTGCCGCCGGCGAGCCA
GCAGCGCACCGCCGATGTCTCTCTCAGCGTGGAAGCCCGGGCCGCCCTAAATCCATACAAAGATGGATTGCCCGACTCGG
TGCAGCAGGCGCTGGCGCAGCGTTACGCCGGCTTGTTCGGCATCTTTCTCAAACACCGTGCCGCCATGAGCCGCATCACC
TTCTGGGGCGTGACCGACGCGGATTCATGGCTCAATAACTGGCCCGTTCGCGGCCGCACCAGTTACCCGCTGCTCTTCGA
TCGCACCGGAAAGCCGAAGCCCGCCTTCGACGCCGTAATCCGTACCGTCGCGAAATAA

Upstream 100 bases:

>100_bases
CCTGCCTCGCCGGCTACCGGATCAGCAAAAAACTAAACCTGCAAATCCAGGACGAACTGGCCGACCGTCGCCGCAAGTTC
GCCACTGCGTCGGAGTCCTT

Downstream 100 bases:

>100_bases
TCTCGTAGCGCCGAACATCTGGGTTAAGGGAGCCGTAAGCAAAGAGGGCAGGCTAAAGCATGCCCAACAAACGCGCACGA
TAGCGGCGGCATTAGTGGTG

Product: endo-1,4-beta-xylanase

Products: NA

Alternate protein names: Xylanase A; 1,4-beta-D-xylan xylanohydrolase A [H]

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MKFIVFSILLAALPANAQPTLKDAFQGIFRIGAAVNQSQFSEQDPRALPIIKAQFNTISPENVLKWESVHPRPDGYAFDA
PDRYVAFGEKNGMFIIGHTLVWHSQTPRWVFQDDKGAPLDREALLKRMREHILTVVGRYKGRVGGWDVVNEALNEDGTLR
KSPWMTIIGEDYLVKAFEYAHEADPKAELYYNDYSVERHAKREGAVVLIKKLQAAGIKVAAIGLQGHDKMDWPSLEDQDA
TIAAFEKLGIKVNITEFDIDVLPPASQQRTADVSLSVEARAALNPYKDGLPDSVQQALAQRYAGLFGIFLKHRAAMSRIT
FWGVTDADSWLNNWPVRGRTSYPLLFDRTGKPKPAFDAVIRTVAK

Sequences:

>Translated_365_residues
MKFIVFSILLAALPANAQPTLKDAFQGIFRIGAAVNQSQFSEQDPRALPIIKAQFNTISPENVLKWESVHPRPDGYAFDA
PDRYVAFGEKNGMFIIGHTLVWHSQTPRWVFQDDKGAPLDREALLKRMREHILTVVGRYKGRVGGWDVVNEALNEDGTLR
KSPWMTIIGEDYLVKAFEYAHEADPKAELYYNDYSVERHAKREGAVVLIKKLQAAGIKVAAIGLQGHDKMDWPSLEDQDA
TIAAFEKLGIKVNITEFDIDVLPPASQQRTADVSLSVEARAALNPYKDGLPDSVQQALAQRYAGLFGIFLKHRAAMSRIT
FWGVTDADSWLNNWPVRGRTSYPLLFDRTGKPKPAFDAVIRTVAK
>Mature_365_residues
MKFIVFSILLAALPANAQPTLKDAFQGIFRIGAAVNQSQFSEQDPRALPIIKAQFNTISPENVLKWESVHPRPDGYAFDA
PDRYVAFGEKNGMFIIGHTLVWHSQTPRWVFQDDKGAPLDREALLKRMREHILTVVGRYKGRVGGWDVVNEALNEDGTLR
KSPWMTIIGEDYLVKAFEYAHEADPKAELYYNDYSVERHAKREGAVVLIKKLQAAGIKVAAIGLQGHDKMDWPSLEDQDA
TIAAFEKLGIKVNITEFDIDVLPPASQQRTADVSLSVEARAALNPYKDGLPDSVQQALAQRYAGLFGIFLKHRAAMSRIT
FWGVTDADSWLNNWPVRGRTSYPLLFDRTGKPKPAFDAVIRTVAK

Specific function: Unknown

COG id: COG3693

COG function: function code G; Beta-1,4-xylanase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 10 (cellulase F) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001000
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00331 Glyco_hydro_10 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 40908; Mature: 40908

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIVFSILLAALPANAQPTLKDAFQGIFRIGAAVNQSQFSEQDPRALPIIKAQFNTISP
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCEEEECCCCCCH
ENVLKWESVHPRPDGYAFDAPDRYVAFGEKNGMFIIGHTLVWHSQTPRWVFQDDKGAPLD
HHCEEECCCCCCCCCCEECCCCCEEEEECCCCEEEEEEEEEEECCCCCEEEECCCCCCCC
REALLKRMREHILTVVGRYKGRVGGWDVVNEALNEDGTLRKSPWMTIIGEDYLVKAFEYA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEECCCCEEEECCHHHHHHHHHH
HEADPKAELYYNDYSVERHAKREGAVVLIKKLQAAGIKVAAIGLQGHDKMDWPSLEDQDA
HCCCCCEEEEECCCCHHHHHCCCCCEEEEEEHHHCCEEEEEEEECCCCCCCCCCCCCCCC
TIAAFEKLGIKVNITEFDIDVLPPASQQRTADVSLSVEARAALNPYKDGLPDSVQQALAQ
HHHHHHHCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHCCCCCCCCCHHHHHHHHH
RYAGLFGIFLKHRAAMSRITFWGVTDADSWLNNWPVRGRTSYPLLFDRTGKPKPAFDAVI
HHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHH
RTVAK
HHHCC
>Mature Secondary Structure
MKFIVFSILLAALPANAQPTLKDAFQGIFRIGAAVNQSQFSEQDPRALPIIKAQFNTISP
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCEEEECCCCCCH
ENVLKWESVHPRPDGYAFDAPDRYVAFGEKNGMFIIGHTLVWHSQTPRWVFQDDKGAPLD
HHCEEECCCCCCCCCCEECCCCCEEEEECCCCEEEEEEEEEEECCCCCEEEECCCCCCCC
REALLKRMREHILTVVGRYKGRVGGWDVVNEALNEDGTLRKSPWMTIIGEDYLVKAFEYA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEECCCCEEEECCHHHHHHHHHH
HEADPKAELYYNDYSVERHAKREGAVVLIKKLQAAGIKVAAIGLQGHDKMDWPSLEDQDA
HCCCCCEEEEECCCCHHHHHCCCCCEEEEEEHHHCCEEEEEEEECCCCCCCCCCCCCCCC
TIAAFEKLGIKVNITEFDIDVLPPASQQRTADVSLSVEARAALNPYKDGLPDSVQQALAQ
HHHHHHHCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHCCCCCCCCCHHHHHHHHH
RYAGLFGIFLKHRAAMSRITFWGVTDADSWLNNWPVRGRTSYPLLFDRTGKPKPAFDAVI
HHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHH
RTVAK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7766665 [H]