Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116621782

Identifier: 116621782

GI number: 116621782

Start: 3372399

End: 3374483

Strand: Reverse

Name: 116621782

Synonym: Acid_2664

Alternate gene names: NA

Gene position: 3374483-3372399 (Counterclockwise)

Preceding gene: 116621783

Following gene: 116621781

Centisome position: 33.86

GC content: 64.32

Gene sequence:

>2085_bases
ATGTCAAACTTGAGCGCTGTCCGTCTCTCCGTCCTCGCGCTTCTCTCGGCCTTCGCCGCCGGTCGCGCATCCGCCCAACC
TCAACCGATGAACTGGACCGCCGCCGAGGACCATCGCAACATGATGGAGCAGCTCGGCATCAAAGCCCTGCGCCCCGGTC
CCAGCGGAAACGAGAGCCTGCCCAATCACGCCAATTACGACGAGTCGCAAGCCAATCCCTTCCCCGACCTCCCCGACGTC
CTCGCGCTGAACAACGGGAAGAAGGTCACGACGGCCGACATGTGGTGGAAGCAGCGCCGTCCCGAAATCATCGAGGCCTT
CGAACGTGAAGTCCTCGGCCGCGTTCCCGCCAATGCTCCCAAGGTCACCTGGAGCATCACGCGCACGCAGAACATCAATG
TCGGGCCGATCCCGGCCGTCGAACGCCTCCTGCTCGGCCACGCCGACAACTCCGCTTACCCCGACATCACCGTTGACATT
CAGATGACGCTGGTGACTCCGGCCGCGGCGCGCAAACCAGTTCCCGTGATGATGCTGTTCGGCCGCGGGTCCTTCCCGCC
GCCTCCCGGCGCACCCAACTTCAACTTCCCCCCGCCCCCTCCGGGCGCCGATCCGCCGGCCACGCAGCAGCTCCTCGCCA
ATGGCTGGGGCTATGCGTATATCAATCCCGCCAGCATCCAAGCCGACAACGGCGCCGGACTGACCAAGGGCGTCATCGGC
CTGGTGAATCACGGACAGCCCCGTAAGCCCGATGACTGGGGCGCACTCCGCGCGTGGGCGTGGGGCGCCTCCCGCGGCCT
GGATTACCTCGAGACCGATAAGACCATCGACGCCAAGCACGTCGGCATCGAAGGCGTGTCGCGCTACGGCAAGGCCGCGC
TCGTTACCATGGCCTTCGATACGCGCTTCGCAGTCGTCCTGGTGGGCTCGTCCGGTGCAGGCGGCGCCAAACTGCACCGC
CGCAATTGGGGCGAAGCCGTAGAGAACCTGACCGGGTCGGGCGAGTATCATTGGATGGCCGGAAACTTTCTGAAGTACGG
CGCCTCCGAAGCCACCTTTGGCTCGAAAAACGCCGGCGACCTGCCCGTGGATGCCCATGAGCTGATCGCCTTGTGCGCGC
CGCGCCTCACCTTCATCAGCTACGGCATTCCGGAAAAAGGCGATGCCAAGTGGCTCGACCATCAAGGCAGCTATATGGCC
GCCGTCGCCGCCGGCCCCGTCTTCCGCCTCTTGGGCGCGAAGGATCTCGGGACCTCGGACGACTATCGCAAAGAGAAGAT
GCCCGCCGTCAACGTCGGAATGCTCGATGGCCAGCTTGCGTGGCGCCAGCACGATGGCGGCCACACCGACGGGCCGAACT
GGAAATATTTCCTCGCCTGGGCCGGCAAGTCCATCCCGCACACTCCCGTGCCCGTCCCCGCCGATCAGCCCCTCGCGCGC
ACCGATCCCAACTCCGCCCTGGCCCACGAGCAGCTTTTAGCCAAGGCGAAACAGGGCGGCATCGACATCTATTTCGAAGG
CGATTCCATCGCCCGCCGCTGGGGCGCGACCGATTATCCCGAGCTCCTGGCCAATTGGAAGCGGAATTTCCACGGCTGGA
ATGCCGCGGATTTCGGCTGGGGCGCCGACCGGACACAGAATATCCTCTGGCGCCTGGAACACGGCGAGCTCGATGGCGTG
AATCCGAAAATCATCGTCCTCCTCGCAGGCACCAATAATATTGGCGAAGAGACCACGGCCGCCGACATTACCCGCGGACT
CCGGAAAGTCGTTACCGTACTACAGGCCAAGGCGCCCACCGCCACAATCGTGGTCACCGGCATCTTCCCCCGCTACGATA
AACCGGCCGCACTGCCCGTGATCGACGAAGTGAATCGCAACCTGGCGCAGCTCGCCGGTGTTCGCTTCGTCAACATCAAC
AACAAGCTCGATGCAACCTGCCTGAACAACGATAAGCTCCACCCCAACCTGAAGGGCTACCAAATCTGGGCCGACGCCCT
GAAGCCTATCTTCCGCGAACTCCTCGGCCCCCCCGCCGCCGAAGACCACGCCCCGCCCCCCACCGGCGACCCCAGCAAAA
AGTAA

Upstream 100 bases:

>100_bases
TGCATACGTGCGATTCTAAGCAATCCGCATTCCGGCACCCGGGGAGTCATCCCCGGGTGCCTTTTTGTTTTTCGGTCTCA
ATGGAATATCATTTGTTTGG

Downstream 100 bases:

>100_bases
GCTCTTGTTTGCTCGCACGCCGCAAACATCCCCACCGAAATATTCACCGCCCCAACGAGCCGCGACCGTAAGGGAGCGTC
CGTCGTACCGCCTTGTATTA

Product: GDSL family lipase

Products: NA

Alternate protein names: Lipolytic Protein G-D-S-L Family; GDSL Family Lipase; Mucin-Desulfating Sulfatase; Acetylhydrolase; 1-Alkyl-2-Acetylglycerophosphocholine Esterase; Exo-1 4-Beta-Glucosidase; Glycoside Hydrolase Family Protein; Acetylhydrolase Lipase_gdsl Protein; GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; 1 4-Beta-D-Glucan Glucohydrolase Cel3D; Xylanase / Methyl-Glucuronoyl Esterase; Acetyl Xylan Esterase Homolog; Cellulose 1 4-Beta-Cellobiosidase; Poisomerase; Glycoside Hydrolase Family 3 Domain Protein; Lipolytic G-D-S-L; GDSL-Like Lipase/Acylhydrolase; Lipolytic GDSL Family; Lipase/Acylhydrolase Family Protein; Platelet-Activating Factor Acetylhydrolase IB Gamma Subunit; Carbohydrate Esterase Family

Number of amino acids: Translated: 694; Mature: 693

Protein sequence:

>694_residues
MSNLSAVRLSVLALLSAFAAGRASAQPQPMNWTAAEDHRNMMEQLGIKALRPGPSGNESLPNHANYDESQANPFPDLPDV
LALNNGKKVTTADMWWKQRRPEIIEAFEREVLGRVPANAPKVTWSITRTQNINVGPIPAVERLLLGHADNSAYPDITVDI
QMTLVTPAAARKPVPVMMLFGRGSFPPPPGAPNFNFPPPPPGADPPATQQLLANGWGYAYINPASIQADNGAGLTKGVIG
LVNHGQPRKPDDWGALRAWAWGASRGLDYLETDKTIDAKHVGIEGVSRYGKAALVTMAFDTRFAVVLVGSSGAGGAKLHR
RNWGEAVENLTGSGEYHWMAGNFLKYGASEATFGSKNAGDLPVDAHELIALCAPRLTFISYGIPEKGDAKWLDHQGSYMA
AVAAGPVFRLLGAKDLGTSDDYRKEKMPAVNVGMLDGQLAWRQHDGGHTDGPNWKYFLAWAGKSIPHTPVPVPADQPLAR
TDPNSALAHEQLLAKAKQGGIDIYFEGDSIARRWGATDYPELLANWKRNFHGWNAADFGWGADRTQNILWRLEHGELDGV
NPKIIVLLAGTNNIGEETTAADITRGLRKVVTVLQAKAPTATIVVTGIFPRYDKPAALPVIDEVNRNLAQLAGVRFVNIN
NKLDATCLNNDKLHPNLKGYQIWADALKPIFRELLGPPAAEDHAPPPTGDPSKK

Sequences:

>Translated_694_residues
MSNLSAVRLSVLALLSAFAAGRASAQPQPMNWTAAEDHRNMMEQLGIKALRPGPSGNESLPNHANYDESQANPFPDLPDV
LALNNGKKVTTADMWWKQRRPEIIEAFEREVLGRVPANAPKVTWSITRTQNINVGPIPAVERLLLGHADNSAYPDITVDI
QMTLVTPAAARKPVPVMMLFGRGSFPPPPGAPNFNFPPPPPGADPPATQQLLANGWGYAYINPASIQADNGAGLTKGVIG
LVNHGQPRKPDDWGALRAWAWGASRGLDYLETDKTIDAKHVGIEGVSRYGKAALVTMAFDTRFAVVLVGSSGAGGAKLHR
RNWGEAVENLTGSGEYHWMAGNFLKYGASEATFGSKNAGDLPVDAHELIALCAPRLTFISYGIPEKGDAKWLDHQGSYMA
AVAAGPVFRLLGAKDLGTSDDYRKEKMPAVNVGMLDGQLAWRQHDGGHTDGPNWKYFLAWAGKSIPHTPVPVPADQPLAR
TDPNSALAHEQLLAKAKQGGIDIYFEGDSIARRWGATDYPELLANWKRNFHGWNAADFGWGADRTQNILWRLEHGELDGV
NPKIIVLLAGTNNIGEETTAADITRGLRKVVTVLQAKAPTATIVVTGIFPRYDKPAALPVIDEVNRNLAQLAGVRFVNIN
NKLDATCLNNDKLHPNLKGYQIWADALKPIFRELLGPPAAEDHAPPPTGDPSKK
>Mature_693_residues
SNLSAVRLSVLALLSAFAAGRASAQPQPMNWTAAEDHRNMMEQLGIKALRPGPSGNESLPNHANYDESQANPFPDLPDVL
ALNNGKKVTTADMWWKQRRPEIIEAFEREVLGRVPANAPKVTWSITRTQNINVGPIPAVERLLLGHADNSAYPDITVDIQ
MTLVTPAAARKPVPVMMLFGRGSFPPPPGAPNFNFPPPPPGADPPATQQLLANGWGYAYINPASIQADNGAGLTKGVIGL
VNHGQPRKPDDWGALRAWAWGASRGLDYLETDKTIDAKHVGIEGVSRYGKAALVTMAFDTRFAVVLVGSSGAGGAKLHRR
NWGEAVENLTGSGEYHWMAGNFLKYGASEATFGSKNAGDLPVDAHELIALCAPRLTFISYGIPEKGDAKWLDHQGSYMAA
VAAGPVFRLLGAKDLGTSDDYRKEKMPAVNVGMLDGQLAWRQHDGGHTDGPNWKYFLAWAGKSIPHTPVPVPADQPLART
DPNSALAHEQLLAKAKQGGIDIYFEGDSIARRWGATDYPELLANWKRNFHGWNAADFGWGADRTQNILWRLEHGELDGVN
PKIIVLLAGTNNIGEETTAADITRGLRKVVTVLQAKAPTATIVVTGIFPRYDKPAALPVIDEVNRNLAQLAGVRFVNINN
KLDATCLNNDKLHPNLKGYQIWADALKPIFRELLGPPAAEDHAPPPTGDPSKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI225543099, Length=144, Percent_Identity=35.4166666666667, Blast_Score=93, Evalue=9e-19,
Organism=Homo sapiens, GI225543097, Length=144, Percent_Identity=35.4166666666667, Blast_Score=93, Evalue=9e-19,
Organism=Homo sapiens, GI4505587, Length=144, Percent_Identity=35.4166666666667, Blast_Score=93, Evalue=9e-19,
Organism=Homo sapiens, GI4505585, Length=198, Percent_Identity=29.7979797979798, Blast_Score=90, Evalue=6e-18,
Organism=Homo sapiens, GI296080766, Length=139, Percent_Identity=30.9352517985612, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI296080768, Length=141, Percent_Identity=30.4964539007092, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI296080770, Length=133, Percent_Identity=30.0751879699248, Blast_Score=72, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24642291, Length=150, Percent_Identity=31.3333333333333, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24642289, Length=150, Percent_Identity=31.3333333333333, Blast_Score=78, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75083; Mature: 74952

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLSAVRLSVLALLSAFAAGRASAQPQPMNWTAAEDHRNMMEQLGIKALRPGPSGNESL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCC
PNHANYDESQANPFPDLPDVLALNNGKKVTTADMWWKQRRPEIIEAFEREVLGRVPANAP
CCCCCCCCCCCCCCCCCCHHEEECCCCEEEEHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
KVTWSITRTQNINVGPIPAVERLLLGHADNSAYPDITVDIQMTLVTPAAARKPVPVMMLF
EEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEEECCHHCCCCCCEEEEE
GRGSFPPPPGAPNFNFPPPPPGADPPATQQLLANGWGYAYINPASIQADNGAGLTKGVIG
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCEEECCCCCCHHHHHHH
LVNHGQPRKPDDWGALRAWAWGASRGLDYLETDKTIDAKHVGIEGVSRYGKAALVTMAFD
HHCCCCCCCCCCCCHHHHHHCCHHCCCCHHHCCCCCCHHHCCHHHHHHCCCEEEEEEEEC
TRFAVVLVGSSGAGGAKLHRRNWGEAVENLTGSGEYHWMAGNFLKYGASEATFGSKNAGD
CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHCCCCCCCCCCCCCCC
LPVDAHELIALCAPRLTFISYGIPEKGDAKWLDHQGSYMAAVAAGPVFRLLGAKDLGTSD
CCCCHHHHHHHHHCHHHHHCCCCCCCCCCCEECCCCCEEEEEHHCHHHHHHCCCCCCCCC
DYRKEKMPAVNVGMLDGQLAWRQHDGGHTDGPNWKYFLAWAGKSIPHTPVPVPADQPLAR
CHHHHCCCEEEEEEECCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
TDPNSALAHEQLLAKAKQGGIDIYFEGDSIARRWGATDYPELLANWKRNFHGWNAADFGW
CCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
GADRTQNILWRLEHGELDGVNPKIIVLLAGTNNIGEETTAADITRGLRKVVTVLQAKAPT
CCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
ATIVVTGIFPRYDKPAALPVIDEVNRNLAQLAGVRFVNINNKLDATCLNNDKLHPNLKGY
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCEEECCCCCCCCCCCCH
QIWADALKPIFRELLGPPAAEDHAPPPTGDPSKK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNLSAVRLSVLALLSAFAAGRASAQPQPMNWTAAEDHRNMMEQLGIKALRPGPSGNESL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCC
PNHANYDESQANPFPDLPDVLALNNGKKVTTADMWWKQRRPEIIEAFEREVLGRVPANAP
CCCCCCCCCCCCCCCCCCHHEEECCCCEEEEHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
KVTWSITRTQNINVGPIPAVERLLLGHADNSAYPDITVDIQMTLVTPAAARKPVPVMMLF
EEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEEEECCHHCCCCCCEEEEE
GRGSFPPPPGAPNFNFPPPPPGADPPATQQLLANGWGYAYINPASIQADNGAGLTKGVIG
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCEEECCCCCCHHHHHHH
LVNHGQPRKPDDWGALRAWAWGASRGLDYLETDKTIDAKHVGIEGVSRYGKAALVTMAFD
HHCCCCCCCCCCCCHHHHHHCCHHCCCCHHHCCCCCCHHHCCHHHHHHCCCEEEEEEEEC
TRFAVVLVGSSGAGGAKLHRRNWGEAVENLTGSGEYHWMAGNFLKYGASEATFGSKNAGD
CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHCCCCCCCCCCCCCCC
LPVDAHELIALCAPRLTFISYGIPEKGDAKWLDHQGSYMAAVAAGPVFRLLGAKDLGTSD
CCCCHHHHHHHHHCHHHHHCCCCCCCCCCCEECCCCCEEEEEHHCHHHHHHCCCCCCCCC
DYRKEKMPAVNVGMLDGQLAWRQHDGGHTDGPNWKYFLAWAGKSIPHTPVPVPADQPLAR
CHHHHCCCEEEEEEECCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
TDPNSALAHEQLLAKAKQGGIDIYFEGDSIARRWGATDYPELLANWKRNFHGWNAADFGW
CCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
GADRTQNILWRLEHGELDGVNPKIIVLLAGTNNIGEETTAADITRGLRKVVTVLQAKAPT
CCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
ATIVVTGIFPRYDKPAALPVIDEVNRNLAQLAGVRFVNINNKLDATCLNNDKLHPNLKGY
EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCEEECCCCCCCCCCCCH
QIWADALKPIFRELLGPPAAEDHAPPPTGDPSKK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA