| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621758
Identifier: 116621758
GI number: 116621758
Start: 3340194
End: 3341510
Strand: Reverse
Name: 116621758
Synonym: Acid_2640
Alternate gene names: NA
Gene position: 3341510-3340194 (Counterclockwise)
Preceding gene: 116621759
Following gene: 116621757
Centisome position: 33.53
GC content: 60.52
Gene sequence:
>1317_bases ATGACGGGCCGCCTTCCGGCGGTAGATAAGATTACGATTCTTTGTCTGGGCACTCGCGGCGATGTTCAACCCTATGTGGC GTTGGCGAGCGCGCTGAAGCAAAGTGGATTTACCCCAAAGATCGCGGCACCGGTTAATTTCGAAGCCTTCATTAAGCAGC ATGGGATCGATTATGCTCCGATCGACATGAACACCGAGGAGGGCTTGAAATCGCCGGAAGGCCGCGCGTGGCTGGCCGCC GGAAACAGCCGCGCTTTCATTCGCCATCTGAGTGCGCTGATGAAGCGCCACAGGCGGAATCTTCAAAAGGGATGCTGGGA GGCTTGTCAGGGCGCCAATGCGATCATCGGCACCGCGATGACGCTCGCCGAGGCGGCATCTTTGTCGGAGAAACTGAGGC TTCCCATGGTAGCCAGCCTGATCTATCCGCTGCTGCCGCGCAGTTCCTCATTTGCGAACTTTCTGGTCGCCGCTAAGAGC CTCCCCACCGGATGGATGAACTCTCTGACTCACATGCTGGTGGAGAGGATGGCATTCGCGGATGTGCGCGAGGATCTGAA CATCTGGCGGGCGGAGATGGGCCTGGCTCCTACCAGGACGACGCCATCGAAATGGCTGCGACTCAACAAGACCCTCACGC TTCACCATTATGGCGAGCCGCTATTCCAGAGACCTCGCGATTGGATGCCTCAAAACGTTCTGACCGGACCGCTGTTTCTG AATGAGGCCGGCACGCCGGCGTCTTCCGGCGCCAAACTGACCCGGTTCCTGGAGGCGGGCGAGCCCCCCGCTTTCCTGGG ATTTGGCAGCATGCCGGTGCTGGATCCCGAAGCGGTATTGACGATGGCAGCACGAGTCACAGAACGGTTGGGAATCCGCG CGGTCGTGGGCGCCGGCTGGAGCCAGCTGGGGGACTCGGATGTGCCGAAGCATATGCTCCTCCTGAAATCTGTGGATCAT GGCCGGCTGTTCCCCAAGTGTCGCGCGCTAGTGCATCATGGGGGCGCGGGCACTACCTTCGCGGGTCTTCTGAGCGGCAG GCCGGCAGCGGTGTATTCGGTTTTTGCGGACCAGCCTTTTTGGGGCGAACGGTTGAAGCAGACCGGAGCCGGCACGCATT TCCGGTTCAGCGAATTCAGCGAAGCGACTTTGTTGAAGGGCCTGCAGCGCGTCTTAGGACCTGCCGTGAGGGACCGGGCG GAGCAGTTGGGAAAGCAACTCGAGCCGGAAGCGGGAGCGGAGAATTCGGTAGCGGAAATCAGCCGGTATCTGAGAGTAAG CCGCTCCGGGCGACTGGCAAAAGGGCACTCAGCATGA
Upstream 100 bases:
>100_bases TCGACGTATTGCCCCCCGATCACATTTACCGGAAGACGCTGGTGCCCAGCCTTGGCGCGGCGTTTCTTGCGTTTTTTAAA ACGTTCCGGGCGAATCAGAT
Downstream 100 bases:
>100_bases CGCCATGCCAGGCGCAGGACTTAGGAGTCAGAGTGAGGTGAGCGCGGAGGAAGCGCTCACCTCATCGCGGCCCTGGGGGC GACACACTCGCCCCTACGCG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MTGRLPAVDKITILCLGTRGDVQPYVALASALKQSGFTPKIAAPVNFEAFIKQHGIDYAPIDMNTEEGLKSPEGRAWLAA GNSRAFIRHLSALMKRHRRNLQKGCWEACQGANAIIGTAMTLAEAASLSEKLRLPMVASLIYPLLPRSSSFANFLVAAKS LPTGWMNSLTHMLVERMAFADVREDLNIWRAEMGLAPTRTTPSKWLRLNKTLTLHHYGEPLFQRPRDWMPQNVLTGPLFL NEAGTPASSGAKLTRFLEAGEPPAFLGFGSMPVLDPEAVLTMAARVTERLGIRAVVGAGWSQLGDSDVPKHMLLLKSVDH GRLFPKCRALVHHGGAGTTFAGLLSGRPAAVYSVFADQPFWGERLKQTGAGTHFRFSEFSEATLLKGLQRVLGPAVRDRA EQLGKQLEPEAGAENSVAEISRYLRVSRSGRLAKGHSA
Sequences:
>Translated_438_residues MTGRLPAVDKITILCLGTRGDVQPYVALASALKQSGFTPKIAAPVNFEAFIKQHGIDYAPIDMNTEEGLKSPEGRAWLAA GNSRAFIRHLSALMKRHRRNLQKGCWEACQGANAIIGTAMTLAEAASLSEKLRLPMVASLIYPLLPRSSSFANFLVAAKS LPTGWMNSLTHMLVERMAFADVREDLNIWRAEMGLAPTRTTPSKWLRLNKTLTLHHYGEPLFQRPRDWMPQNVLTGPLFL NEAGTPASSGAKLTRFLEAGEPPAFLGFGSMPVLDPEAVLTMAARVTERLGIRAVVGAGWSQLGDSDVPKHMLLLKSVDH GRLFPKCRALVHHGGAGTTFAGLLSGRPAAVYSVFADQPFWGERLKQTGAGTHFRFSEFSEATLLKGLQRVLGPAVRDRA EQLGKQLEPEAGAENSVAEISRYLRVSRSGRLAKGHSA >Mature_437_residues TGRLPAVDKITILCLGTRGDVQPYVALASALKQSGFTPKIAAPVNFEAFIKQHGIDYAPIDMNTEEGLKSPEGRAWLAAG NSRAFIRHLSALMKRHRRNLQKGCWEACQGANAIIGTAMTLAEAASLSEKLRLPMVASLIYPLLPRSSSFANFLVAAKSL PTGWMNSLTHMLVERMAFADVREDLNIWRAEMGLAPTRTTPSKWLRLNKTLTLHHYGEPLFQRPRDWMPQNVLTGPLFLN EAGTPASSGAKLTRFLEAGEPPAFLGFGSMPVLDPEAVLTMAARVTERLGIRAVVGAGWSQLGDSDVPKHMLLLKSVDHG RLFPKCRALVHHGGAGTTFAGLLSGRPAAVYSVFADQPFWGERLKQTGAGTHFRFSEFSEATLLKGLQRVLGPAVRDRAE QLGKQLEPEAGAENSVAEISRYLRVSRSGRLAKGHSA
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae L518_C2_147 and M.tuberculosis Rv1524 [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323218, Length=450, Percent_Identity=26.4444444444444, Blast_Score=149, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004276 [H]
Pfam domain/function: PF03033 Glyco_transf_28 [H]
EC number: NA
Molecular weight: Translated: 47695; Mature: 47563
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRLPAVDKITILCLGTRGDVQPYVALASALKQSGFTPKIAAPVNFEAFIKQHGIDYAP CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHCCCCCCC IDMNTEEGLKSPEGRAWLAAGNSRAFIRHLSALMKRHRRNLQKGCWEACQGANAIIGTAM CCCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH TLAEAASLSEKLRLPMVASLIYPLLPRSSSFANFLVAAKSLPTGWMNSLTHMLVERMAFA HHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DVREDLNIWRAEMGLAPTRTTPSKWLRLNKTLTLHHYGEPLFQRPRDWMPQNVLTGPLFL HHHHHHHHHHHHHCCCCCCCCHHHHHHHCCEEEEEECCCHHHHCCHHCCCCCCCCCCEEE NEAGTPASSGAKLTRFLEAGEPPAFLGFGSMPVLDPEAVLTMAARVTERLGIRAVVGAGW CCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCHHEECCCH SQLGDSDVPKHMLLLKSVDHGRLFPKCRALVHHGGAGTTFAGLLSGRPAAVYSVFADQPF HHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHCCCCH WGERLKQTGAGTHFRFSEFSEATLLKGLQRVLGPAVRDRAEQLGKQLEPEAGAENSVAEI HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHH SRYLRVSRSGRLAKGHSA HHHHHHHCCCCCCCCCCC >Mature Secondary Structure TGRLPAVDKITILCLGTRGDVQPYVALASALKQSGFTPKIAAPVNFEAFIKQHGIDYAP CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHCCCCCCC IDMNTEEGLKSPEGRAWLAAGNSRAFIRHLSALMKRHRRNLQKGCWEACQGANAIIGTAM CCCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH TLAEAASLSEKLRLPMVASLIYPLLPRSSSFANFLVAAKSLPTGWMNSLTHMLVERMAFA HHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DVREDLNIWRAEMGLAPTRTTPSKWLRLNKTLTLHHYGEPLFQRPRDWMPQNVLTGPLFL HHHHHHHHHHHHHCCCCCCCCHHHHHHHCCEEEEEECCCHHHHCCHHCCCCCCCCCCEEE NEAGTPASSGAKLTRFLEAGEPPAFLGFGSMPVLDPEAVLTMAARVTERLGIRAVVGAGW CCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCHHEECCCH SQLGDSDVPKHMLLLKSVDHGRLFPKCRALVHHGGAGTTFAGLLSGRPAAVYSVFADQPF HHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHCCCCH WGERLKQTGAGTHFRFSEFSEATLLKGLQRVLGPAVRDRAEQLGKQLEPEAGAENSVAEI HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHH SRYLRVSRSGRLAKGHSA HHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]