| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621755
Identifier: 116621755
GI number: 116621755
Start: 3334981
End: 3337842
Strand: Direct
Name: 116621755
Synonym: Acid_2637
Alternate gene names: NA
Gene position: 3334981-3337842 (Clockwise)
Preceding gene: 116621752
Following gene: 116621756
Centisome position: 33.46
GC content: 65.09
Gene sequence:
>2862_bases ATGCTGAAGCGAATTCTGGCAGGCTTGATTGCGGCGGCCGTCTTACCCGCGGCATCCTATTACACGCTCCGCCTGGAGGA CTCCAAGGCCGTCTACCTCACCCCCGGCGACGGCGCGGCGGATGCGAGCGATACCATCCAACAGGCCATCGACAAGGTGC AGGCCGCGGCAGGCGAAGGCATTGTGTTCGTGCCCGAGGGCCGCTACCGGCTCACCAAGACCGTGTACATTCCGGCGGCG ATCCGGTTGATCGGATACGGAGCCACCCGGCCCGTCTTCGTGCTCGGCCCCAACACGCCGGGCTACCAGGACCCGGCCAA CGAAAAGTACATGATCTTCTTTAGCGGCCGCGGCCGCGGGGAAGCCGGCGCGGGCACCTTCTATTCCGGCATGAGCAACA TCGATCTCGAAGTCCTCGCAGGGAATGCGGGCGCCGTCGGCGTGCGCGGGAAATACGCGCAGCATTGCATCCTCGCCCAC ATGGATTTTCGCATTGGCTCGGGCCTCGCCGGCGTTCACGAAACCGGCAACGTTATGGAAGATGTCAGCTTCCACGGCGG GCAGTACGGCATCTGGACCGGGACTCCTTCGCCGGGCTGGCAGCTCACACTGGTGGACGCCAGGTTCGAAGGCCAGCGCG AAGCCGCGATCCGCGAAAAGGCCGCCGGCCTGACCCTGGTTCGCCCGCATTTCCGCAGCGTGCCCACCGCGATCTCGATC GACGCCGGCTCGCACGAGGAACTGTGGGTCAAGGACGCGCGCTTCGAGGATATCTCCGGCCCAGCCGTGATCGTCAGCCT CGAAGAAAATCCGCGCACGCAGATCAATATCGAAAATGCCGTGTGCCGCCGCGTGCCGGTGTTCGCGAGCCTGCGCGATA GTGGACGCCAGTTCACCGCGCCCGGTGAAGTCTACGCGGTCCCCGTCTTCTCCCACGGACTGCGCTTCGCCGATATCGGC GCCGCGCCCATCACCAGCAGCGTCTTCGAGATCGAAAAGCTCACCGCCATGCCCGCGCCCGTGAAGAGCGATCTTCCGGA CCTCCCCTCGCGCGATTCGTGGGTCAACATCCGCTCGCTGGGCGCCAAGGGAGATGGCTCCTCCGACGACACCGAGGTCT TCCGCAAGGCTGTCGCGGCCCATCGCGCGATCTACCTGCCGCAGGGCAAGTACGTCATCAGCGATACCATCGCGCTCCGC CCCGATACCGTGCTGATCGGCCTGCATCCCAGCGCAACGCAGCTGGTGCTGCGCGATTCCACCGCGGCCTTCCAGGGCGT CGGCGCGCCGAAGCCGATGATCGAAGCGCCCCAGCGCGGCAGCAACATCGTGATCGGCCTCGGGCTCTATACGAATGGGA TCAATCCGCGCGCGGTCGCAGCGAAGTGGATGGCCGGCGCCGGTTCGCTGATGAACGACGTCCGCTTCCTCGGCGGCCAC GGCACTTCGAAGCTCGAAGGTGGCCGCGACAATCCCTATAACAACGCGCACTCCGCGGATCCCGATCTCAACCGCCGCTG GGATGGCCAGTACCCAAGTCTCTGGGTCACCGATGGCGGCGGCGGTACCTTCTTTGATATCTGGACGCCGAGCACGTTCG CGCAATCGGGAATGCTGGTCTCGAACACCGCCACCGAAGGCCGCATTTATCAGATGTCCAGCGAGCACCACGTCCGCTAC GAAGTGCAGCTGCACAACGTGTCCAACTGGAAGGTCTACGCGCTGCAGACCGAGGAAGAGCGCGGCGAAGGCGGCTTCGC GCTGCCGCTCGAGATCCAATCCTCCAGCAACATCACGGTCGCGAACTTTCACATTTACCGCGTCATCAGCAGCTTTCAAC CCTTCCCTTATGCGGTGAAGGTGTTGAACTCCAGGGATATCCGCTTCCGCAATATCCACTGCTACAGCAACAGCAAAGTC TCCTTCGATAGCGCAATCTACGACCAGACGCACGATTCCGCGCTCCGCCAGCGCGAGTTTGCCTGGCTGACGCTCTCCGG CGCCGCGCCCGCCGCGCGCACGCGTCCCGCATCAACCGTGCTGGACGCCGCTGCGAAGGTGGAGAAGCTTGCGGGCGGCT TCTACAACATCTCGGGCGGCGCCGCCTCACCCGCGGGCGACTTCTACTTCGTGGACGCGCACTGGCAGCGCATCTACCGC TGGTCGGGCCAACTCTCAACCGTGCGCGACAATCCGCTCGACCCCGTCAACCTCGCCTTCGACAAGGCCGGCAATCTGAT GGTGGTCTCGTACGCCGGCGCGGGCATGGTCTACTCCTTCAAACCCGGCTCGCCCGAATCCGAGATCACCCTGCTGACGC CGCAGCCTGCCGCGCCGCGTCCCGGCATGATCCCGGTGCTGCCCGTGAGCGATTGGCGCATGAATCCGCAAACGCTCGCG CAGCCTCATCGCCAGTACGTATCGCCCGATGGCTCGACCTTCATTCCCGCCGGCCAGGATTTCGTCAGCGGTGCGATGAG CTGGGGCGTGAAGAGCAGCGCGCTGCTGCGCGGCTTCGGTCTGGCCGCCGCGGCGCAGGGCAAGCCGGTCTACCTCACCA GCGAATCCGAAGTCACCACATGGCAGGCGTCCCTGACACCCGCGGGTGGCATGACGGATTTCAAGGTCTTCGCCAACCAG GGCGGCGAAAGCGTGGCGGTGGATGAGAAGGGCAATGTCTACGTCGCCGCCGGACAGATCTTCGTCTACGACCCCGCCGG TCGCCTGATCGAGACCATTGACGTCCCCGAGCGCCCGCTGCAATTGGTCTTCGGCGGCGCCGATGGCAAGACGTTGTTCG TCCCCGCGCGCACCTCGCTATACGCCGTGCGCACGAAATTCGCGGGCCGGAGGGCGCAGTGA
Upstream 100 bases:
>100_bases AACAGCAGCAGCTTTTTCAAGAATTGGGCTCCAACTTTCAGTGTAACTTGCGGCGCATCGCCCCCCTCAGCATGCTAGAT TCAGACTGAACCTTCCCTAT
Downstream 100 bases:
>100_bases AAGCCCTGATCGCCATCCTCGGGCTCGCCTCCTTTATGGCCGGCGGCCAACAAGGCAGCGACGCGGAAGTCTGGCTCACC ACTCCGGACAAATCTGCGCT
Product: SMP-30/gluconolaconase/LRE domain-containing protein
Products: NA
Alternate protein names: SMP-30/Gluconolaconase/LRE-Like Region Family; SMP-30/Gluconolaconase/LRE-Like Region-Containing Protein
Number of amino acids: Translated: 953; Mature: 953
Protein sequence:
>953_residues MLKRILAGLIAAAVLPAASYYTLRLEDSKAVYLTPGDGAADASDTIQQAIDKVQAAAGEGIVFVPEGRYRLTKTVYIPAA IRLIGYGATRPVFVLGPNTPGYQDPANEKYMIFFSGRGRGEAGAGTFYSGMSNIDLEVLAGNAGAVGVRGKYAQHCILAH MDFRIGSGLAGVHETGNVMEDVSFHGGQYGIWTGTPSPGWQLTLVDARFEGQREAAIREKAAGLTLVRPHFRSVPTAISI DAGSHEELWVKDARFEDISGPAVIVSLEENPRTQINIENAVCRRVPVFASLRDSGRQFTAPGEVYAVPVFSHGLRFADIG AAPITSSVFEIEKLTAMPAPVKSDLPDLPSRDSWVNIRSLGAKGDGSSDDTEVFRKAVAAHRAIYLPQGKYVISDTIALR PDTVLIGLHPSATQLVLRDSTAAFQGVGAPKPMIEAPQRGSNIVIGLGLYTNGINPRAVAAKWMAGAGSLMNDVRFLGGH GTSKLEGGRDNPYNNAHSADPDLNRRWDGQYPSLWVTDGGGGTFFDIWTPSTFAQSGMLVSNTATEGRIYQMSSEHHVRY EVQLHNVSNWKVYALQTEEERGEGGFALPLEIQSSSNITVANFHIYRVISSFQPFPYAVKVLNSRDIRFRNIHCYSNSKV SFDSAIYDQTHDSALRQREFAWLTLSGAAPAARTRPASTVLDAAAKVEKLAGGFYNISGGAASPAGDFYFVDAHWQRIYR WSGQLSTVRDNPLDPVNLAFDKAGNLMVVSYAGAGMVYSFKPGSPESEITLLTPQPAAPRPGMIPVLPVSDWRMNPQTLA QPHRQYVSPDGSTFIPAGQDFVSGAMSWGVKSSALLRGFGLAAAAQGKPVYLTSESEVTTWQASLTPAGGMTDFKVFANQ GGESVAVDEKGNVYVAAGQIFVYDPAGRLIETIDVPERPLQLVFGGADGKTLFVPARTSLYAVRTKFAGRRAQ
Sequences:
>Translated_953_residues MLKRILAGLIAAAVLPAASYYTLRLEDSKAVYLTPGDGAADASDTIQQAIDKVQAAAGEGIVFVPEGRYRLTKTVYIPAA IRLIGYGATRPVFVLGPNTPGYQDPANEKYMIFFSGRGRGEAGAGTFYSGMSNIDLEVLAGNAGAVGVRGKYAQHCILAH MDFRIGSGLAGVHETGNVMEDVSFHGGQYGIWTGTPSPGWQLTLVDARFEGQREAAIREKAAGLTLVRPHFRSVPTAISI DAGSHEELWVKDARFEDISGPAVIVSLEENPRTQINIENAVCRRVPVFASLRDSGRQFTAPGEVYAVPVFSHGLRFADIG AAPITSSVFEIEKLTAMPAPVKSDLPDLPSRDSWVNIRSLGAKGDGSSDDTEVFRKAVAAHRAIYLPQGKYVISDTIALR PDTVLIGLHPSATQLVLRDSTAAFQGVGAPKPMIEAPQRGSNIVIGLGLYTNGINPRAVAAKWMAGAGSLMNDVRFLGGH GTSKLEGGRDNPYNNAHSADPDLNRRWDGQYPSLWVTDGGGGTFFDIWTPSTFAQSGMLVSNTATEGRIYQMSSEHHVRY EVQLHNVSNWKVYALQTEEERGEGGFALPLEIQSSSNITVANFHIYRVISSFQPFPYAVKVLNSRDIRFRNIHCYSNSKV SFDSAIYDQTHDSALRQREFAWLTLSGAAPAARTRPASTVLDAAAKVEKLAGGFYNISGGAASPAGDFYFVDAHWQRIYR WSGQLSTVRDNPLDPVNLAFDKAGNLMVVSYAGAGMVYSFKPGSPESEITLLTPQPAAPRPGMIPVLPVSDWRMNPQTLA QPHRQYVSPDGSTFIPAGQDFVSGAMSWGVKSSALLRGFGLAAAAQGKPVYLTSESEVTTWQASLTPAGGMTDFKVFANQ GGESVAVDEKGNVYVAAGQIFVYDPAGRLIETIDVPERPLQLVFGGADGKTLFVPARTSLYAVRTKFAGRRAQ >Mature_953_residues MLKRILAGLIAAAVLPAASYYTLRLEDSKAVYLTPGDGAADASDTIQQAIDKVQAAAGEGIVFVPEGRYRLTKTVYIPAA IRLIGYGATRPVFVLGPNTPGYQDPANEKYMIFFSGRGRGEAGAGTFYSGMSNIDLEVLAGNAGAVGVRGKYAQHCILAH MDFRIGSGLAGVHETGNVMEDVSFHGGQYGIWTGTPSPGWQLTLVDARFEGQREAAIREKAAGLTLVRPHFRSVPTAISI DAGSHEELWVKDARFEDISGPAVIVSLEENPRTQINIENAVCRRVPVFASLRDSGRQFTAPGEVYAVPVFSHGLRFADIG AAPITSSVFEIEKLTAMPAPVKSDLPDLPSRDSWVNIRSLGAKGDGSSDDTEVFRKAVAAHRAIYLPQGKYVISDTIALR PDTVLIGLHPSATQLVLRDSTAAFQGVGAPKPMIEAPQRGSNIVIGLGLYTNGINPRAVAAKWMAGAGSLMNDVRFLGGH GTSKLEGGRDNPYNNAHSADPDLNRRWDGQYPSLWVTDGGGGTFFDIWTPSTFAQSGMLVSNTATEGRIYQMSSEHHVRY EVQLHNVSNWKVYALQTEEERGEGGFALPLEIQSSSNITVANFHIYRVISSFQPFPYAVKVLNSRDIRFRNIHCYSNSKV SFDSAIYDQTHDSALRQREFAWLTLSGAAPAARTRPASTVLDAAAKVEKLAGGFYNISGGAASPAGDFYFVDAHWQRIYR WSGQLSTVRDNPLDPVNLAFDKAGNLMVVSYAGAGMVYSFKPGSPESEITLLTPQPAAPRPGMIPVLPVSDWRMNPQTLA QPHRQYVSPDGSTFIPAGQDFVSGAMSWGVKSSALLRGFGLAAAAQGKPVYLTSESEVTTWQASLTPAGGMTDFKVFANQ GGESVAVDEKGNVYVAAGQIFVYDPAGRLIETIDVPERPLQLVFGGADGKTLFVPARTSLYAVRTKFAGRRAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102630; Mature: 102630
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRILAGLIAAAVLPAASYYTLRLEDSKAVYLTPGDGAADASDTIQQAIDKVQAAAGEG CHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC IVFVPEGRYRLTKTVYIPAAIRLIGYGATRPVFVLGPNTPGYQDPANEKYMIFFSGRGRG EEEEECCCEEEEEEEEECEEEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCC EAGAGTFYSGMSNIDLEVLAGNAGAVGVRGKYAQHCILAHMDFRIGSGLAGVHETGNVME CCCCCHHHCCCCCCEEEEEECCCCEEECCCHHHCEEEEEEECEEECCCCCCCCCCCCHHH DVSFHGGQYGIWTGTPSPGWQLTLVDARFEGQREAAIREKAAGLTLVRPHFRSVPTAISI HHHCCCCEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCEEEECCHHHCCCCEEEE DAGSHEELWVKDARFEDISGPAVIVSLEENPRTQINIENAVCRRVPVFASLRDSGRQFTA CCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEECHHHHHCCCEEEEHHHCCCEECC PGEVYAVPVFSHGLRFADIGAAPITSSVFEIEKLTAMPAPVKSDLPDLPSRDSWVNIRSL CCCEEEEEHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEEEC GAKGDGSSDDTEVFRKAVAAHRAIYLPQGKYVISDTIALRPDTVLIGLHPSATQLVLRDS CCCCCCCCCHHHHHHHHHHHHEEEEECCCCEEEEEEEEECCCEEEEEECCCCEEEEEECC TAAFQGVGAPKPMIEAPQRGSNIVIGLGLYTNGINPRAVAAKWMAGAGSLMNDVRFLGGH CHHHCCCCCCCCHHCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHEECCC GTSKLEGGRDNPYNNAHSADPDLNRRWDGQYPSLWVTDGGGGTFFDIWTPSTFAQSGMLV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHCCEEE SNTATEGRIYQMSSEHHVRYEVQLHNVSNWKVYALQTEEERGEGGFALPLEIQSSSNITV ECCCCCCEEEEECCCCEEEEEEEEEECCCEEEEEEEEHHCCCCCCEEEEEEECCCCCEEE ANFHIYRVISSFQPFPYAVKVLNSRDIRFRNIHCYSNSKVSFDSAIYDQTHDSALRQREF EEEEEEEHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCEEECHHHHCCCHHHHHHHCEE AWLTLSGAAPAARTRPASTVLDAAAKVEKLAGGFYNISGGAASPAGDFYFVDAHWQRIYR EEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEHHHHEEHH WSGQLSTVRDNPLDPVNLAFDKAGNLMVVSYAGAGMVYSFKPGSPESEITLLTPQPAAPR HCCCEEECCCCCCCCCEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEEECCCCCCCC PGMIPVLPVSDWRMNPQTLAQPHRQYVSPDGSTFIPAGQDFVSGAMSWGVKSSALLRGFG CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCHHHHHHHCC LAAAAQGKPVYLTSESEVTTWQASLTPAGGMTDFKVFANQGGESVAVDEKGNVYVAAGQI CEEECCCCEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCEEEEEEEE FVYDPAGRLIETIDVPERPLQLVFGGADGKTLFVPARTSLYAVRTKFAGRRAQ EEECCCCCEEEECCCCCCCEEEEEECCCCCEEEEECCCEEEEEEHHCCCCCCC >Mature Secondary Structure MLKRILAGLIAAAVLPAASYYTLRLEDSKAVYLTPGDGAADASDTIQQAIDKVQAAAGEG CHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC IVFVPEGRYRLTKTVYIPAAIRLIGYGATRPVFVLGPNTPGYQDPANEKYMIFFSGRGRG EEEEECCCEEEEEEEEECEEEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCC EAGAGTFYSGMSNIDLEVLAGNAGAVGVRGKYAQHCILAHMDFRIGSGLAGVHETGNVME CCCCCHHHCCCCCCEEEEEECCCCEEECCCHHHCEEEEEEECEEECCCCCCCCCCCCHHH DVSFHGGQYGIWTGTPSPGWQLTLVDARFEGQREAAIREKAAGLTLVRPHFRSVPTAISI HHHCCCCEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCEEEECCHHHCCCCEEEE DAGSHEELWVKDARFEDISGPAVIVSLEENPRTQINIENAVCRRVPVFASLRDSGRQFTA CCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEECHHHHHCCCEEEEHHHCCCEECC PGEVYAVPVFSHGLRFADIGAAPITSSVFEIEKLTAMPAPVKSDLPDLPSRDSWVNIRSL CCCEEEEEHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEEEC GAKGDGSSDDTEVFRKAVAAHRAIYLPQGKYVISDTIALRPDTVLIGLHPSATQLVLRDS CCCCCCCCCHHHHHHHHHHHHEEEEECCCCEEEEEEEEECCCEEEEEECCCCEEEEEECC TAAFQGVGAPKPMIEAPQRGSNIVIGLGLYTNGINPRAVAAKWMAGAGSLMNDVRFLGGH CHHHCCCCCCCCHHCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHEECCC GTSKLEGGRDNPYNNAHSADPDLNRRWDGQYPSLWVTDGGGGTFFDIWTPSTFAQSGMLV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHCCEEE SNTATEGRIYQMSSEHHVRYEVQLHNVSNWKVYALQTEEERGEGGFALPLEIQSSSNITV ECCCCCCEEEEECCCCEEEEEEEEEECCCEEEEEEEEHHCCCCCCEEEEEEECCCCCEEE ANFHIYRVISSFQPFPYAVKVLNSRDIRFRNIHCYSNSKVSFDSAIYDQTHDSALRQREF EEEEEEEHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCEEECHHHHCCCHHHHHHHCEE AWLTLSGAAPAARTRPASTVLDAAAKVEKLAGGFYNISGGAASPAGDFYFVDAHWQRIYR EEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEHHHHEEHH WSGQLSTVRDNPLDPVNLAFDKAGNLMVVSYAGAGMVYSFKPGSPESEITLLTPQPAAPR HCCCEEECCCCCCCCCEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEEECCCCCCCC PGMIPVLPVSDWRMNPQTLAQPHRQYVSPDGSTFIPAGQDFVSGAMSWGVKSSALLRGFG CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCHHHHHHHCC LAAAAQGKPVYLTSESEVTTWQASLTPAGGMTDFKVFANQGGESVAVDEKGNVYVAAGQI CEEECCCCEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCEEEEEEEE FVYDPAGRLIETIDVPERPLQLVFGGADGKTLFVPARTSLYAVRTKFAGRRAQ EEECCCCCEEEECCCCCCCEEEEEECCCCCEEEEECCCEEEEEEHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA