| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621670
Identifier: 116621670
GI number: 116621670
Start: 3230254
End: 3231360
Strand: Direct
Name: 116621670
Synonym: Acid_2552
Alternate gene names: NA
Gene position: 3230254-3231360 (Clockwise)
Preceding gene: 116621669
Following gene: 116621671
Centisome position: 32.41
GC content: 69.02
Gene sequence:
>1107_bases GTGTCCGCAGATTGGGAGTCCTCACTGGAGCGATGGCGCTCCGCCGGCCTGATCGATACCGCCGGCGCCGAGCGCATTCG CGCGTTTGAAGGAGCGCGGCCGCGCACGCAGGGACTGCGCTGGCCGATCATCATCGCGTGCGCCTTAGGTGCGCTGCTGT TGGGGGCCGGCGTACTGCTCTTCGTGTCGGCGCATTGGGACGAACTCTCCCCGGCCTGGCGGATGATGCTTGTGCTGCTG ATGGTCGGGTTCTTTCACGCGGCCGGGGCGGGTGCGATGGGCCGGTTCGACAGCCTGGCGATCGCACTGCACGCGGTAGG CACGGTGGCGCTGGGCGCCGGAATCGCGCTGACGGGACAGATCTTCAATTTAAACGAGCACTGGCCGTCGGGGATTCTGC TGTGGACTTTGGGCGCGGCGCTGGGCTGGGTGCTACTGGGCCACTGGACCCAGGCGCTGCTGGTGGCGATCCTGATGCCT TACTGGCTGGGCGGGGAGTGGATGGTGCGCATGACTGGATTCCACTACTCGCTGCCGGTTACGGCAGGCGCCTGCGCGCT GGCGTTCACTTACCTTTCGGCGCGGCGAGGGCCGGCCGATTCCGGGCTGCGCAAGGCGCTCTGCTGGCTCGGCGCGCTGA CGCTGCCTCCGGCCGTAGTGGCGCTGGCGGCCGATTCGTGGCGCACGCTGCCGCCAGCCACGGAGCTTGCGGGCGGGTGG TGCGCGGCGATCCTGCTGCCGCTCGCCCTGGCATACGTGCTACGCGGACGGGATGCGATCTGGAACGTACTCGCGATCGC GTGGACGCTCGGGCTGCCGCCGCTCAGCGAGGGGCACCCCGACCGGGTCGCGGTGTACGGGTGGCTCGCGCTGGGCGCAT TCGGGCTGGCCGCGTGGGGTATCCGCGAGTCAAGGCCGGAACGGATCAACCTGGGGATCGCGGGTTTTGCGCTCACGGTG CTGGCGTTCTACTTCTCGAGCGTGATGGACAAGCTTGGGCGGTCCGCCAGCCTGATCGGCCTTGGGATTCTCTTTCTCGG CGGCGGCTGGGCGCTGGAGCGTACGCGGCGCCGGTTGATCGCGCACATGGAGGCGGAGGCCAGATGA
Upstream 100 bases:
>100_bases TGCGGGCATTCCGACGGAGCAGGAACCTCCACCGGTGCGTTAATCAGTACATTGCTAATGGGTACTTGTTTGCCGCGACG CATTCCGGTAAACATGTGTT
Downstream 100 bases:
>100_bases GGCCCCTGCAGCGAGGAATTGCGCTGGGAGTGCTGCAGTGCCTGCTGGTGCTGAGCGTCGCGGGCAAATACGCCTGGGAC CGCGAGCGCCTGCCGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSADWESSLERWRSAGLIDTAGAERIRAFEGARPRTQGLRWPIIIACALGALLLGAGVLLFVSAHWDELSPAWRMMLVLL MVGFFHAAGAGAMGRFDSLAIALHAVGTVALGAGIALTGQIFNLNEHWPSGILLWTLGAALGWVLLGHWTQALLVAILMP YWLGGEWMVRMTGFHYSLPVTAGACALAFTYLSARRGPADSGLRKALCWLGALTLPPAVVALAADSWRTLPPATELAGGW CAAILLPLALAYVLRGRDAIWNVLAIAWTLGLPPLSEGHPDRVAVYGWLALGAFGLAAWGIRESRPERINLGIAGFALTV LAFYFSSVMDKLGRSASLIGLGILFLGGGWALERTRRRLIAHMEAEAR
Sequences:
>Translated_368_residues MSADWESSLERWRSAGLIDTAGAERIRAFEGARPRTQGLRWPIIIACALGALLLGAGVLLFVSAHWDELSPAWRMMLVLL MVGFFHAAGAGAMGRFDSLAIALHAVGTVALGAGIALTGQIFNLNEHWPSGILLWTLGAALGWVLLGHWTQALLVAILMP YWLGGEWMVRMTGFHYSLPVTAGACALAFTYLSARRGPADSGLRKALCWLGALTLPPAVVALAADSWRTLPPATELAGGW CAAILLPLALAYVLRGRDAIWNVLAIAWTLGLPPLSEGHPDRVAVYGWLALGAFGLAAWGIRESRPERINLGIAGFALTV LAFYFSSVMDKLGRSASLIGLGILFLGGGWALERTRRRLIAHMEAEAR >Mature_367_residues SADWESSLERWRSAGLIDTAGAERIRAFEGARPRTQGLRWPIIIACALGALLLGAGVLLFVSAHWDELSPAWRMMLVLLM VGFFHAAGAGAMGRFDSLAIALHAVGTVALGAGIALTGQIFNLNEHWPSGILLWTLGAALGWVLLGHWTQALLVAILMPY WLGGEWMVRMTGFHYSLPVTAGACALAFTYLSARRGPADSGLRKALCWLGALTLPPAVVALAADSWRTLPPATELAGGWC AAILLPLALAYVLRGRDAIWNVLAIAWTLGLPPLSEGHPDRVAVYGWLALGAFGLAAWGIRESRPERINLGIAGFALTVL AFYFSSVMDKLGRSASLIGLGILFLGGGWALERTRRRLIAHMEAEAR
Specific function: Unknown
COG id: COG4872
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39465; Mature: 39334
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADWESSLERWRSAGLIDTAGAERIRAFEGARPRTQGLRWPIIIACALGALLLGAGVLL CCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHH FVSAHWDELSPAWRMMLVLLMVGFFHAAGAGAMGRFDSLAIALHAVGTVALGAGIALTGQ HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE IFNLNEHWPSGILLWTLGAALGWVLLGHWTQALLVAILMPYWLGGEWMVRMTGFHYSLPV EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEECCC TAGACALAFTYLSARRGPADSGLRKALCWLGALTLPPAVVALAADSWRTLPPATELAGGW HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHH CAAILLPLALAYVLRGRDAIWNVLAIAWTLGLPPLSEGHPDRVAVYGWLALGAFGLAAWG HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC IRESRPERINLGIAGFALTVLAFYFSSVMDKLGRSASLIGLGILFLGGGWALERTRRRLI CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH AHMEAEAR HHHHHCCC >Mature Secondary Structure SADWESSLERWRSAGLIDTAGAERIRAFEGARPRTQGLRWPIIIACALGALLLGAGVLL CCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHH FVSAHWDELSPAWRMMLVLLMVGFFHAAGAGAMGRFDSLAIALHAVGTVALGAGIALTGQ HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE IFNLNEHWPSGILLWTLGAALGWVLLGHWTQALLVAILMPYWLGGEWMVRMTGFHYSLPV EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEECCC TAGACALAFTYLSARRGPADSGLRKALCWLGALTLPPAVVALAADSWRTLPPATELAGGW HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHH CAAILLPLALAYVLRGRDAIWNVLAIAWTLGLPPLSEGHPDRVAVYGWLALGAFGLAAWG HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC IRESRPERINLGIAGFALTVLAFYFSSVMDKLGRSASLIGLGILFLGGGWALERTRRRLI CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH AHMEAEAR HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA