| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621624
Identifier: 116621624
GI number: 116621624
Start: 3180350
End: 3180841
Strand: Reverse
Name: 116621624
Synonym: Acid_2506
Alternate gene names: NA
Gene position: 3180841-3180350 (Counterclockwise)
Preceding gene: 116621625
Following gene: 116621623
Centisome position: 31.92
GC content: 53.05
Gene sequence:
>492_bases ATGCCTTGCGGCAGCGGTGACACCAAAGCGCACACGAGAATCATACTCTCTCGTTCAGTGAAAGATCAAGTGAAACAAGG TACGAAGTCCGAAACAGCGTTTCCGTATAGTCACTCGCAAATACAGGCTTTAGAGATGGCGCTTTCTCCGGAGCGATTTC AACCGTACCTGAATAGGGCTGGTGGTAGTCGGCATAAGGCTATATTAATCTACGAAAGGAACACCGCATTATCGGAGTCC CTGTACGGCGTTACTCAGGCTACGGAAATAGCTCTCAGGAATGCGCTACACCGTGTGCTTTCTGCTGCATACGGAACGAT GTGGTTCGATGTGGTGGAGTTAGGAGTACCGCAGGCCAACAAGATCGCGGCCGCAGAAAGCGAAATCCGTCGGACCAGGC GCATTCTGACGCCAGGGGCAGTAGTTGCCGAGCTTGGTCTCGGATTTTGGACCGCTCCGAGAGTGGCATGCGGAAATGCC TTGTGGAGGTGA
Upstream 100 bases:
>100_bases TGGCAAATCGCGCCTCCATGAGGAGTTAGGCCGCTAAAAGCAAAACGGGCCGCCCTCGAAAGGTAACGGCCCGTTAGCGT AATTTCTATGCCGTGGGCAC
Downstream 100 bases:
>100_bases GGAACCCAAAGCTGTTTCTCGTGAGAAGCTCGAGAGACTCCGCACGCTACGAAACCGCATCGCGCATCCCGAGCCGATCT TGAGACTGGATTTGCCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MPCGSGDTKAHTRIILSRSVKDQVKQGTKSETAFPYSHSQIQALEMALSPERFQPYLNRAGGSRHKAILIYERNTALSES LYGVTQATEIALRNALHRVLSAAYGTMWFDVVELGVPQANKIAAAESEIRRTRRILTPGAVVAELGLGFWTAPRVACGNA LWR
Sequences:
>Translated_163_residues MPCGSGDTKAHTRIILSRSVKDQVKQGTKSETAFPYSHSQIQALEMALSPERFQPYLNRAGGSRHKAILIYERNTALSES LYGVTQATEIALRNALHRVLSAAYGTMWFDVVELGVPQANKIAAAESEIRRTRRILTPGAVVAELGLGFWTAPRVACGNA LWR >Mature_162_residues PCGSGDTKAHTRIILSRSVKDQVKQGTKSETAFPYSHSQIQALEMALSPERFQPYLNRAGGSRHKAILIYERNTALSESL YGVTQATEIALRNALHRVLSAAYGTMWFDVVELGVPQANKIAAAESEIRRTRRILTPGAVVAELGLGFWTAPRVACGNAL WR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17911; Mature: 17780
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCGSGDTKAHTRIILSRSVKDQVKQGTKSETAFPYSHSQIQALEMALSPERFQPYLNRA CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHC GGSRHKAILIYERNTALSESLYGVTQATEIALRNALHRVLSAAYGTMWFDVVELGVPQAN CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH KIAAAESEIRRTRRILTPGAVVAELGLGFWTAPRVACGNALWR HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHCCCCCC >Mature Secondary Structure PCGSGDTKAHTRIILSRSVKDQVKQGTKSETAFPYSHSQIQALEMALSPERFQPYLNRA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHC GGSRHKAILIYERNTALSESLYGVTQATEIALRNALHRVLSAAYGTMWFDVVELGVPQAN CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH KIAAAESEIRRTRRILTPGAVVAELGLGFWTAPRVACGNALWR HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA